RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 NPHP4O75161 1426 aaPredicted RBP26.85■■□□□ 1.89
EFCAB11-202ENST00000538485 PANK3Q9H999 370 aa26.85■■□□□ 1.89
EFCAB11-202ENST00000538485 PIK3R4Q99570 1358 aa26.82■■□□□ 1.88
EFCAB11-202ENST00000538485 PER1O15534 1290 aaPredicted RBP26.81■■□□□ 1.88
EFCAB11-202ENST00000538485 HSPA2P54652 639 aa26.81■■□□□ 1.88
EFCAB11-202ENST00000538485 PUS7Q96PZ0 661 aaKnown RBP26.81■■□□□ 1.88
EFCAB11-202ENST00000538485 CABP2Q9NPB3 220 aa26.81■■□□□ 1.88
EFCAB11-202ENST00000538485 LMTK3Q96Q04 1460 aa26.8■■□□□ 1.88
EFCAB11-202ENST00000538485 XRN1Q8IZH2 1706 aaKnown RBP26.79■■□□□ 1.88
EFCAB11-202ENST00000538485 PRKRIP1Q9H875 184 aaPredicted RBP26.79■■□□□ 1.88
EFCAB11-202ENST00000538485 SRPK2P78362 688 aaKnown RBP26.78■■□□□ 1.88
EFCAB11-202ENST00000538485 PTCH1Q13635 1447 aa26.78■■□□□ 1.88
EFCAB11-202ENST00000538485 CDK19Q9BWU1 502 aa26.76■■□□□ 1.88
EFCAB11-202ENST00000538485 CHD2O14647 1828 aaKnown RBP26.76■■□□□ 1.87
EFCAB11-202ENST00000538485 KCNA6P17658 529 aa26.76■■□□□ 1.87
EFCAB11-202ENST00000538485 SLC12A5Q9H2X9 1139 aa26.75■■□□□ 1.87
EFCAB11-202ENST00000538485 TMC1Q8TDI8 760 aa26.74■■□□□ 1.87
EFCAB11-202ENST00000538485 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.74■■□□□ 1.87
EFCAB11-202ENST00000538485 CNGB1Q14028 1251 aaPredicted RBP26.73■■□□□ 1.87
EFCAB11-202ENST00000538485 WASLO00401 505 aaPredicted RBP26.72■■□□□ 1.87
EFCAB11-202ENST00000538485 ATAD2Q6PL18 1390 aa26.7■■□□□ 1.87
EFCAB11-202ENST00000538485 CCER2I3L3R5 266 aa26.69■■□□□ 1.86
EFCAB11-202ENST00000538485 ADGRB2O60241 1585 aa26.68■■□□□ 1.86
EFCAB11-202ENST00000538485 CARD14Q9BXL6 1004 aa26.68■■□□□ 1.86
EFCAB11-202ENST00000538485 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
EFCAB11-202ENST00000538485 NINLQ9Y2I6 1382 aa26.65■■□□□ 1.86
EFCAB11-202ENST00000538485 STRCQ7RTU9 1775 aa26.64■■□□□ 1.86
EFCAB11-202ENST00000538485 AMER1Q5JTC6 1135 aaPredicted RBP26.63■■□□□ 1.85
EFCAB11-202ENST00000538485 CC2D1BQ5T0F9 858 aaKnown RBP26.63■■□□□ 1.85
EFCAB11-202ENST00000538485 KTN1Q86UP2 1357 aaKnown RBP26.62■■□□□ 1.85
EFCAB11-202ENST00000538485 ANKRD36BQ8N2N9 1353 aa26.62■■□□□ 1.85
EFCAB11-202ENST00000538485 CABP1Q9NZU7 370 aa26.62■■□□□ 1.85
EFCAB11-202ENST00000538485 NWD1Q149M9 1564 aa26.61■■□□□ 1.85
EFCAB11-202ENST00000538485 NUDT16Q96DE0 195 aaKnown RBP26.6■■□□□ 1.85
EFCAB11-202ENST00000538485 PARD3Q8TEW0 1356 aa26.6■■□□□ 1.85
EFCAB11-202ENST00000538485 RALBP1Q15311 655 aa26.59■■□□□ 1.85
EFCAB11-202ENST00000538485 CD163L1Q9NR16 1453 aa26.59■■□□□ 1.85
EFCAB11-202ENST00000538485 A0A1W2PP64 1363 aa26.58■■□□□ 1.85
EFCAB11-202ENST00000538485 NSD3Q9BZ95 1437 aa26.58■■□□□ 1.85
EFCAB11-202ENST00000538485 RBM33Q96EV2 1170 aaKnown RBP26.58■■□□□ 1.85
EFCAB11-202ENST00000538485 ATP7BP35670 1465 aa26.58■■□□□ 1.85
EFCAB11-202ENST00000538485 PRR36Q9H6K5 1346 aa26.58■■□□□ 1.85
EFCAB11-202ENST00000538485 CCDC184Q52MB2 194 aa26.57■■□□□ 1.84
EFCAB11-202ENST00000538485 CCDC61Q9Y6R9 512 aa26.57■■□□□ 1.84
EFCAB11-202ENST00000538485 NPC1L1Q9UHC9 1359 aa26.56■■□□□ 1.84
EFCAB11-202ENST00000538485 PPIP5K1Q6PFW1 1433 aa26.56■■□□□ 1.84
EFCAB11-202ENST00000538485 TERF2IPQ9NYB0 399 aa26.55■■□□□ 1.84
EFCAB11-202ENST00000538485 NALCNQ8IZF0 1738 aa26.54■■□□□ 1.84
EFCAB11-202ENST00000538485 NUTM2FA1L443 756 aa26.54■■□□□ 1.84
EFCAB11-202ENST00000538485 MYBBP1AQ9BQG0 1328 aaKnown RBP26.52■■□□□ 1.84
EFCAB11-202ENST00000538485 YTHDC1Q96MU7 727 aaKnown RBP26.51■■□□□ 1.83
EFCAB11-202ENST00000538485 STRCP1A6NGW2 1772 aa26.51■■□□□ 1.83
EFCAB11-202ENST00000538485 NKTRP30414 1462 aaKnown RBP26.51■■□□□ 1.83
EFCAB11-202ENST00000538485 HDGFL2Q7Z4V5 671 aaPredicted RBP26.51■■□□□ 1.83
EFCAB11-202ENST00000538485 USP32Q8NFA0 1604 aa26.51■■□□□ 1.83
EFCAB11-202ENST00000538485 MRS2Q9HD23 443 aa26.49■■□□□ 1.83
EFCAB11-202ENST00000538485 TOPAZ1Q8N9V7 1692 aa26.49■■□□□ 1.83
EFCAB11-202ENST00000538485 ADGRL3Q9HAR2 1447 aa26.49■■□□□ 1.83
EFCAB11-202ENST00000538485 PROSER2Q86WR7 435 aaPredicted RBP26.49■■□□□ 1.83
EFCAB11-202ENST00000538485 CPSF1Q10570 1443 aaKnown RBP26.48■■□□□ 1.83
EFCAB11-202ENST00000538485 CGNL1Q0VF96 1302 aa26.47■■□□□ 1.83
EFCAB11-202ENST00000538485 CDC42BPGQ6DT37 1551 aa26.47■■□□□ 1.83
EFCAB11-202ENST00000538485 RGPD8O14715 1765 aaPredicted RBP26.46■■□□□ 1.83
EFCAB11-202ENST00000538485 FMN2Q9NZ56 1722 aa26.46■■□□□ 1.83
EFCAB11-202ENST00000538485 C14orf37Q86TY3 774 aa26.45■■□□□ 1.82
EFCAB11-202ENST00000538485 PLEKHG3A1L390 1219 aa26.44■■□□□ 1.82
EFCAB11-202ENST00000538485 NLRP13Q86W25 1043 aa26.44■■□□□ 1.82
EFCAB11-202ENST00000538485 ANKARQ7Z5J8 1434 aa26.43■■□□□ 1.82
EFCAB11-202ENST00000538485 ITSN1Q15811 1721 aa26.42■■□□□ 1.82
EFCAB11-202ENST00000538485 BRD4O60885 1362 aaPredicted RBP26.41■■□□□ 1.82
EFCAB11-202ENST00000538485 AKAP12Q02952 1782 aa26.41■■□□□ 1.82
EFCAB11-202ENST00000538485 ACEP12821 1306 aa26.4■■□□□ 1.82
EFCAB11-202ENST00000538485 TMEM94Q12767 1356 aa26.4■■□□□ 1.82
EFCAB11-202ENST00000538485 PPP2R1AP30153 589 aa26.4■■□□□ 1.82
EFCAB11-202ENST00000538485 NSD2O96028 1365 aa26.39■■□□□ 1.82
EFCAB11-202ENST00000538485 MON2Q7Z3U7 1717 aa26.39■■□□□ 1.82
EFCAB11-202ENST00000538485 FYB1O15117 783 aa26.39■■□□□ 1.82
EFCAB11-202ENST00000538485 ZNF692Q9BU19 519 aaPredicted RBP26.39■■□□□ 1.82
EFCAB11-202ENST00000538485 PMFBP1Q8TBY8 1022 aa26.38■■□□□ 1.81
EFCAB11-202ENST00000538485 EDC4Q6P2E9 1401 aaKnown RBP26.38■■□□□ 1.81
EFCAB11-202ENST00000538485 ZNF335Q9H4Z2 1342 aaPredicted RBP26.38■■□□□ 1.81
EFCAB11-202ENST00000538485 MORC1Q86VD1 984 aa26.37■■□□□ 1.81
EFCAB11-202ENST00000538485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.37■■□□□ 1.81
EFCAB11-202ENST00000538485 C19orf44Q9H6X5 657 aa26.37■■□□□ 1.81
EFCAB11-202ENST00000538485 GGNBP2Q9H3C7 697 aa26.36■■□□□ 1.81
EFCAB11-202ENST00000538485 DMRT2Q9Y5R5 561 aa26.36■■□□□ 1.81
EFCAB11-202ENST00000538485 NCOA3Q9Y6Q9 1424 aa26.35■■□□□ 1.81
EFCAB11-202ENST00000538485 POLR3AO14802 1390 aaPredicted RBP26.34■■□□□ 1.81
EFCAB11-202ENST00000538485 FAM9BQ8IZU0 186 aa26.34■■□□□ 1.81
EFCAB11-202ENST00000538485 KIF20BQ96Q89 1820 aa26.33■■□□□ 1.81
EFCAB11-202ENST00000538485 TNNT2P45379 298 aaPredicted RBP26.32■■□□□ 1.8
EFCAB11-202ENST00000538485 PNISRQ8TF01 805 aaKnown RBP26.32■■□□□ 1.8
EFCAB11-202ENST00000538485 USP6P35125 1406 aa26.32■■□□□ 1.8
EFCAB11-202ENST00000538485 NGDNQ8NEJ9 315 aaKnown RBP26.32■■□□□ 1.8
EFCAB11-202ENST00000538485 ANKRD26Q9UPS8 1709 aa26.31■■□□□ 1.8
EFCAB11-202ENST00000538485 NRKQ7Z2Y5 1582 aa26.31■■□□□ 1.8
EFCAB11-202ENST00000538485 XIRP1Q702N8 1843 aaKnown RBP26.3■■□□□ 1.8
EFCAB11-202ENST00000538485 NME9Q86XW9 330 aa26.29■■□□□ 1.8
EFCAB11-202ENST00000538485 LRRC7Q96NW7 1537 aa26.29■■□□□ 1.8
EFCAB11-202ENST00000538485 ESCO1Q5FWF5 840 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms