RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
DDB1-211ENST00000538280 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
DDB1-211ENST00000538280 TMEM94Q12767 1356 aa12.5□□□□□ -0.41
DDB1-211ENST00000538280 BLMP54132 1417 aaPredicted RBP12.5□□□□□ -0.41
DDB1-211ENST00000538280 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
DDB1-211ENST00000538280 PPP4R2Q9NY27 417 aa12.49□□□□□ -0.41
DDB1-211ENST00000538280 FAM135BQ49AJ0 1406 aa12.48□□□□□ -0.41
DDB1-211ENST00000538280 EIF3AQ14152 1382 aaKnown RBP12.48□□□□□ -0.41
DDB1-211ENST00000538280 CHD2O14647 1828 aaKnown RBP12.48□□□□□ -0.41
DDB1-211ENST00000538280 COL16A1Q07092 1604 aaPredicted RBP12.48□□□□□ -0.41
DDB1-211ENST00000538280 NPC1L1Q9UHC9 1359 aa12.47□□□□□ -0.41
DDB1-211ENST00000538280 SBNO2Q9Y2G9 1366 aa12.47□□□□□ -0.41
DDB1-211ENST00000538280 NOS1P29475 1434 aa12.46□□□□□ -0.41
DDB1-211ENST00000538280 SLC26A8Q96RN1 970 aa12.46□□□□□ -0.41
DDB1-211ENST00000538280 PANK3Q9H999 370 aa12.46□□□□□ -0.41
DDB1-211ENST00000538280 ASXL1Q8IXJ9 1541 aa12.46□□□□□ -0.42
DDB1-211ENST00000538280 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.42
DDB1-211ENST00000538280 CDCA8Q53HL2 280 aa12.45□□□□□ -0.42
DDB1-211ENST00000538280 LRP6O75581 1613 aa12.44□□□□□ -0.42
DDB1-211ENST00000538280 ADGRB1O14514 1584 aa12.44□□□□□ -0.42
DDB1-211ENST00000538280 IRX6P78412 446 aaPredicted RBP12.44□□□□□ -0.42
DDB1-211ENST00000538280 IDI1Q13907 227 aa12.44□□□□□ -0.42
DDB1-211ENST00000538280 PIK3C2GO75747 1445 aa12.44□□□□□ -0.42
DDB1-211ENST00000538280 TMEM131LA2VDJ0 1609 aa12.44□□□□□ -0.42
DDB1-211ENST00000538280 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
DDB1-211ENST00000538280 EID1Q9Y6B2 187 aa12.43□□□□□ -0.42
DDB1-211ENST00000538280 ZFYVE9O95405 1425 aa12.43□□□□□ -0.42
DDB1-211ENST00000538280 ADGRF5Q8IZF2 1346 aa12.42□□□□□ -0.42
DDB1-211ENST00000538280 KCNA6P17658 529 aa12.42□□□□□ -0.42
DDB1-211ENST00000538280 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
DDB1-211ENST00000538280 CNGB1Q14028 1251 aaPredicted RBP12.41□□□□□ -0.42
DDB1-211ENST00000538280 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
DDB1-211ENST00000538280 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.41□□□□□ -0.42
DDB1-211ENST00000538280 QRICH2Q9H0J4 1663 aa12.41□□□□□ -0.42
DDB1-211ENST00000538280 NEXMIFQ5QGS0 1516 aa12.41□□□□□ -0.42
DDB1-211ENST00000538280 RPGRIP1LQ68CZ1 1315 aa12.4□□□□□ -0.42
DDB1-211ENST00000538280 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
DDB1-211ENST00000538280 SHPRHQ149N8 1683 aa12.39□□□□□ -0.43
DDB1-211ENST00000538280 CFAP70Q5T0N1 1121 aa12.39□□□□□ -0.43
DDB1-211ENST00000538280 PROSER2Q86WR7 435 aaPredicted RBP12.39□□□□□ -0.43
DDB1-211ENST00000538280 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
DDB1-211ENST00000538280 DIP2AQ14689 1571 aa12.38□□□□□ -0.43
DDB1-211ENST00000538280 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
DDB1-211ENST00000538280 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
DDB1-211ENST00000538280 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
DDB1-211ENST00000538280 RBM19Q9Y4C8 960 aaKnown RBP12.37□□□□□ -0.43
DDB1-211ENST00000538280 MSH6P52701 1360 aa12.37□□□□□ -0.43
DDB1-211ENST00000538280 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
DDB1-211ENST00000538280 PLEKHG1Q9ULL1 1385 aa12.36□□□□□ -0.43
DDB1-211ENST00000538280 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
DDB1-211ENST00000538280 NRXN3Q9Y4C0 1643 aa12.36□□□□□ -0.43
DDB1-211ENST00000538280 ADAMTS13Q76LX8 1427 aa12.36□□□□□ -0.43
DDB1-211ENST00000538280 JCADQ9P266 1359 aa12.35□□□□□ -0.43
DDB1-211ENST00000538280 C14orf93Q9H972 538 aaKnown RBP12.35□□□□□ -0.43
DDB1-211ENST00000538280 KNSTRNQ9Y448 316 aa12.35□□□□□ -0.43
DDB1-211ENST00000538280 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
DDB1-211ENST00000538280 NUTM2DQ5VT03 806 aaPredicted RBP12.33□□□□□ -0.44
DDB1-211ENST00000538280 SLAIN2Q9P270 581 aa12.33□□□□□ -0.44
DDB1-211ENST00000538280 PTPRUQ92729 1446 aa12.32□□□□□ -0.44
DDB1-211ENST00000538280 RRP1P56182 461 aaKnown RBP12.32□□□□□ -0.44
DDB1-211ENST00000538280 MYT1Q01538 1121 aa12.32□□□□□ -0.44
DDB1-211ENST00000538280 B4GALNT3Q6L9W6 998 aa12.32□□□□□ -0.44
DDB1-211ENST00000538280 PUS7Q96PZ0 661 aaKnown RBP12.32□□□□□ -0.44
DDB1-211ENST00000538280 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
DDB1-211ENST00000538280 CENPJQ9HC77 1338 aaPredicted RBP12.32□□□□□ -0.44
DDB1-211ENST00000538280 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
DDB1-211ENST00000538280 TULP4Q9NRJ4 1543 aa12.31□□□□□ -0.44
DDB1-211ENST00000538280 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
DDB1-211ENST00000538280 NALCNQ8IZF0 1738 aa12.3□□□□□ -0.44
DDB1-211ENST00000538280 FANCIQ9NVI1 1328 aa12.3□□□□□ -0.44
DDB1-211ENST00000538280 SLC52A1Q9NWF4 448 aa12.29□□□□□ -0.44
DDB1-211ENST00000538280 ADAMTS8Q9UP79 889 aa12.29□□□□□ -0.44
DDB1-211ENST00000538280 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
DDB1-211ENST00000538280 POLR3AO14802 1390 aaPredicted RBP12.28□□□□□ -0.44
DDB1-211ENST00000538280 PLEKHH1Q9ULM0 1364 aa12.28□□□□□ -0.44
DDB1-211ENST00000538280 SENP3-EIF4A1A0A087X0R7 540 aa12.26□□□□□ -0.45
DDB1-211ENST00000538280 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
DDB1-211ENST00000538280 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
DDB1-211ENST00000538280 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
DDB1-211ENST00000538280 NCOA3Q9Y6Q9 1424 aa12.26□□□□□ -0.45
DDB1-211ENST00000538280 VGFO15240 615 aaPredicted RBP12.25□□□□□ -0.45
DDB1-211ENST00000538280 WDR43Q15061 677 aaKnown RBP eCLIP12.25□□□□□ -0.45
DDB1-211ENST00000538280 TBX22Q9Y458 520 aa12.25□□□□□ -0.45
DDB1-211ENST00000538280 SPATA31A6Q5VVP1 1343 aa12.25□□□□□ -0.45
DDB1-211ENST00000538280 MST1RQ04912 1400 aa12.25□□□□□ -0.45
DDB1-211ENST00000538280 NSD3Q9BZ95 1437 aa12.25□□□□□ -0.45
DDB1-211ENST00000538280 RGS12O14924 1447 aa12.24□□□□□ -0.45
DDB1-211ENST00000538280 BRINP3Q76B58 766 aa12.24□□□□□ -0.45
DDB1-211ENST00000538280 C14orf37Q86TY3 774 aa12.24□□□□□ -0.45
DDB1-211ENST00000538280 CCDC136Q96JN2 1154 aa12.24□□□□□ -0.45
DDB1-211ENST00000538280 ANKRD26Q9UPS8 1709 aa12.24□□□□□ -0.45
DDB1-211ENST00000538280 MEX3CQ5U5Q3 659 aaKnown RBP12.23□□□□□ -0.45
DDB1-211ENST00000538280 TRMT2AQ8IZ69 625 aaKnown RBP12.23□□□□□ -0.45
DDB1-211ENST00000538280 NGEFQ8N5V2 710 aa12.23□□□□□ -0.45
DDB1-211ENST00000538280 TRAK1Q9UPV9 953 aa12.23□□□□□ -0.45
DDB1-211ENST00000538280 NSD2O96028 1365 aa12.22□□□□□ -0.45
DDB1-211ENST00000538280 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
DDB1-211ENST00000538280 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
DDB1-211ENST00000538280 NINLQ9Y2I6 1382 aa12.22□□□□□ -0.45
DDB1-211ENST00000538280 NUTM2BA6NNL0 878 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms