RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 EVC2Q86UK5 1308 aa16.22■□□□□ 0.19
SPARC-207ENST00000537849 MINK1Q8N4C8 1332 aaPredicted RBP16.22■□□□□ 0.19
SPARC-207ENST00000537849 CPS1P31327 1500 aa16.22■□□□□ 0.19
SPARC-207ENST00000537849 TULP4Q9NRJ4 1543 aa16.2■□□□□ 0.18
SPARC-207ENST00000537849 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
SPARC-207ENST00000537849 STRCQ7RTU9 1775 aa16.19■□□□□ 0.18
SPARC-207ENST00000537849 PER1O15534 1290 aaPredicted RBP16.19■□□□□ 0.18
SPARC-207ENST00000537849 KCNA6P17658 529 aa16.19■□□□□ 0.18
SPARC-207ENST00000537849 CDK19Q9BWU1 502 aa16.19■□□□□ 0.18
SPARC-207ENST00000537849 PANK3Q9H999 370 aa16.18■□□□□ 0.18
SPARC-207ENST00000537849 CABP2Q9NPB3 220 aa16.18■□□□□ 0.18
SPARC-207ENST00000537849 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.18■□□□□ 0.18
SPARC-207ENST00000537849 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
SPARC-207ENST00000537849 WASLO00401 505 aaPredicted RBP16.16■□□□□ 0.18
SPARC-207ENST00000537849 MYOM1P52179 1685 aa16.15■□□□□ 0.18
SPARC-207ENST00000537849 SLC12A5Q9H2X9 1139 aa16.15■□□□□ 0.18
SPARC-207ENST00000537849 ANP32CO43423 234 aa16.13■□□□□ 0.17
SPARC-207ENST00000537849 SRPK2P78362 688 aaKnown RBP16.13■□□□□ 0.17
SPARC-207ENST00000537849 CARD14Q9BXL6 1004 aa16.12■□□□□ 0.17
SPARC-207ENST00000537849 TMC1Q8TDI8 760 aa16.11■□□□□ 0.17
SPARC-207ENST00000537849 NUDT16Q96DE0 195 aaKnown RBP16.1■□□□□ 0.17
SPARC-207ENST00000537849 PRKRIP1Q9H875 184 aaPredicted RBP16.1■□□□□ 0.17
SPARC-207ENST00000537849 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
SPARC-207ENST00000537849 ADGRB2O60241 1585 aa16.09■□□□□ 0.17
SPARC-207ENST00000537849 NWD1Q149M9 1564 aa16.09■□□□□ 0.17
SPARC-207ENST00000537849 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.17
SPARC-207ENST00000537849 PROSER2Q86WR7 435 aaPredicted RBP16.08■□□□□ 0.16
SPARC-207ENST00000537849 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
SPARC-207ENST00000537849 CABP1Q9NZU7 370 aa16.07■□□□□ 0.16
SPARC-207ENST00000537849 PRR36Q9H6K5 1346 aa16.07■□□□□ 0.16
SPARC-207ENST00000537849 NINLQ9Y2I6 1382 aa16.06■□□□□ 0.16
SPARC-207ENST00000537849 AMER1Q5JTC6 1135 aaPredicted RBP16.06■□□□□ 0.16
SPARC-207ENST00000537849 KNSTRNQ9Y448 316 aa16.06■□□□□ 0.16
SPARC-207ENST00000537849 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
SPARC-207ENST00000537849 ANKRD36BQ8N2N9 1353 aa16.04■□□□□ 0.16
SPARC-207ENST00000537849 CCER2I3L3R5 266 aa16.04■□□□□ 0.16
SPARC-207ENST00000537849 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
SPARC-207ENST00000537849 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
SPARC-207ENST00000537849 NPC1L1Q9UHC9 1359 aa16.03■□□□□ 0.16
SPARC-207ENST00000537849 PLEKHG3A1L390 1219 aa16.03■□□□□ 0.16
SPARC-207ENST00000537849 NKTRP30414 1462 aaKnown RBP16.03■□□□□ 0.16
SPARC-207ENST00000537849 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
SPARC-207ENST00000537849 RALBP1Q15311 655 aa16.02■□□□□ 0.16
SPARC-207ENST00000537849 TERF2IPQ9NYB0 399 aa16.02■□□□□ 0.16
SPARC-207ENST00000537849 ATP7BP35670 1465 aa16.02■□□□□ 0.15
SPARC-207ENST00000537849 NALCNQ8IZF0 1738 aa16.02■□□□□ 0.15
SPARC-207ENST00000537849 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
SPARC-207ENST00000537849 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
SPARC-207ENST00000537849 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
SPARC-207ENST00000537849 PPIP5K1Q6PFW1 1433 aa16.01■□□□□ 0.15
SPARC-207ENST00000537849 ADGRL3Q9HAR2 1447 aa16.01■□□□□ 0.15
SPARC-207ENST00000537849 USP32Q8NFA0 1604 aa16.01■□□□□ 0.15
SPARC-207ENST00000537849 FMN2Q9NZ56 1722 aa16■□□□□ 0.15
SPARC-207ENST00000537849 HDGFL2Q7Z4V5 671 aaPredicted RBP16■□□□□ 0.15
SPARC-207ENST00000537849 CPSF1Q10570 1443 aaKnown RBP16■□□□□ 0.15
SPARC-207ENST00000537849 NCOA3Q9Y6Q9 1424 aa16■□□□□ 0.15
SPARC-207ENST00000537849 A0A1W2PP64 1363 aa16■□□□□ 0.15
SPARC-207ENST00000537849 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
SPARC-207ENST00000537849 PARD3Q8TEW0 1356 aa16■□□□□ 0.15
SPARC-207ENST00000537849 C19orf44Q9H6X5 657 aa15.99■□□□□ 0.15
SPARC-207ENST00000537849 NSD3Q9BZ95 1437 aa15.99■□□□□ 0.15
SPARC-207ENST00000537849 ZNF335Q9H4Z2 1342 aaPredicted RBP15.98■□□□□ 0.15
SPARC-207ENST00000537849 CCDC184Q52MB2 194 aa15.98■□□□□ 0.15
SPARC-207ENST00000537849 ANKARQ7Z5J8 1434 aa15.98■□□□□ 0.15
SPARC-207ENST00000537849 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
SPARC-207ENST00000537849 TOPAZ1Q8N9V7 1692 aa15.98■□□□□ 0.15
SPARC-207ENST00000537849 TMEM94Q12767 1356 aa15.98■□□□□ 0.15
SPARC-207ENST00000537849 CDC42BPGQ6DT37 1551 aa15.97■□□□□ 0.15
SPARC-207ENST00000537849 ACEP12821 1306 aa15.96■□□□□ 0.15
SPARC-207ENST00000537849 XIRP1Q702N8 1843 aaKnown RBP15.96■□□□□ 0.15
SPARC-207ENST00000537849 AKAP12Q02952 1782 aa15.96■□□□□ 0.15
SPARC-207ENST00000537849 C14orf37Q86TY3 774 aa15.96■□□□□ 0.15
SPARC-207ENST00000537849 FYB1O15117 783 aa15.95■□□□□ 0.14
SPARC-207ENST00000537849 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
SPARC-207ENST00000537849 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
SPARC-207ENST00000537849 ITSN1Q15811 1721 aa15.94■□□□□ 0.14
SPARC-207ENST00000537849 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
SPARC-207ENST00000537849 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
SPARC-207ENST00000537849 POLR3AO14802 1390 aaPredicted RBP15.92■□□□□ 0.14
SPARC-207ENST00000537849 MON2Q7Z3U7 1717 aa15.92■□□□□ 0.14
SPARC-207ENST00000537849 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
SPARC-207ENST00000537849 PHF8Q9UPP1 1060 aa15.91■□□□□ 0.14
SPARC-207ENST00000537849 EDC4Q6P2E9 1401 aaKnown RBP15.91■□□□□ 0.14
SPARC-207ENST00000537849 NSD2O96028 1365 aa15.9■□□□□ 0.14
SPARC-207ENST00000537849 ATF3P18847 181 aa15.9■□□□□ 0.14
SPARC-207ENST00000537849 MORC1Q86VD1 984 aa15.9■□□□□ 0.14
SPARC-207ENST00000537849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.9■□□□□ 0.14
SPARC-207ENST00000537849 NGDNQ8NEJ9 315 aaKnown RBP15.9■□□□□ 0.14
SPARC-207ENST00000537849 SSH2Q76I76 1423 aa15.9■□□□□ 0.14
SPARC-207ENST00000537849 TTC21BQ7Z4L5 1316 aa15.9■□□□□ 0.14
SPARC-207ENST00000537849 DCCP43146 1447 aa15.89■□□□□ 0.13
SPARC-207ENST00000537849 ESCO1Q5FWF5 840 aa15.89■□□□□ 0.13
SPARC-207ENST00000537849 NLRP13Q86W25 1043 aa15.89■□□□□ 0.13
SPARC-207ENST00000537849 ORAI2Q96SN7 254 aa15.89■□□□□ 0.13
SPARC-207ENST00000537849 GGNBP2Q9H3C7 697 aa15.89■□□□□ 0.13
SPARC-207ENST00000537849 MRS2Q9HD23 443 aa15.89■□□□□ 0.13
SPARC-207ENST00000537849 BRD4O60885 1362 aaPredicted RBP15.88■□□□□ 0.13
SPARC-207ENST00000537849 USP6P35125 1406 aa15.88■□□□□ 0.13
SPARC-207ENST00000537849 AEBP2Q6ZN18 517 aaPredicted RBP15.88■□□□□ 0.13
SPARC-207ENST00000537849 CADPS2Q86UW7 1296 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms