RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
GOPC-203ENST00000535237 K7ELQ4 463 aaPredicted RBP18.16■□□□□ 0.5
GOPC-203ENST00000535237 FBXW7Q969H0 707 aa18.16■□□□□ 0.5
GOPC-203ENST00000535237 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
GOPC-203ENST00000535237 C1orf115Q9H7X2 142 aa18.15■□□□□ 0.5
GOPC-203ENST00000535237 ZNF330Q9Y3S2 320 aaPredicted RBP18.15■□□□□ 0.5
GOPC-203ENST00000535237 AMPHP49418 695 aa18.14■□□□□ 0.5
GOPC-203ENST00000535237 TRIM5Q9C035 493 aa18.14■□□□□ 0.5
GOPC-203ENST00000535237 CIZ1Q9ULV3 898 aaPredicted RBP18.14■□□□□ 0.5
GOPC-203ENST00000535237 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.5
GOPC-203ENST00000535237 TSR2Q969E8 191 aaKnown RBP18.14■□□□□ 0.49
GOPC-203ENST00000535237 CCDC27Q2M243 656 aa18.14■□□□□ 0.49
GOPC-203ENST00000535237 NECTIN2Q92692 538 aa18.14■□□□□ 0.49
GOPC-203ENST00000535237 ANKRD50Q9ULJ7 1429 aa18.14■□□□□ 0.49
GOPC-203ENST00000535237 MNS1Q8NEH6 495 aa18.13■□□□□ 0.49
GOPC-203ENST00000535237 ZMYND15Q9H091 742 aa18.13■□□□□ 0.49
GOPC-203ENST00000535237 MINK1Q8N4C8 1332 aaPredicted RBP18.13■□□□□ 0.49
GOPC-203ENST00000535237 GNAI1P63096 354 aa18.13■□□□□ 0.49
GOPC-203ENST00000535237 SPC24Q8NBT2 197 aa18.13■□□□□ 0.49
GOPC-203ENST00000535237 HFM1A2PYH4 1435 aa18.13■□□□□ 0.49
GOPC-203ENST00000535237 PES1O00541 588 aaKnown RBP18.13■□□□□ 0.49
GOPC-203ENST00000535237 HMOX1P09601 288 aa18.13■□□□□ 0.49
GOPC-203ENST00000535237 TPD52L1Q16890 204 aaPredicted RBP18.13■□□□□ 0.49
GOPC-203ENST00000535237 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.13■□□□□ 0.49
GOPC-203ENST00000535237 GGNBP2Q9H3C7 697 aa18.12■□□□□ 0.49
GOPC-203ENST00000535237 ARGLU1Q9NWB6 273 aaPredicted RBP18.12■□□□□ 0.49
GOPC-203ENST00000535237 FIBPO43427 364 aa18.12■□□□□ 0.49
GOPC-203ENST00000535237 NPHP1O15259 732 aa18.12■□□□□ 0.49
GOPC-203ENST00000535237 FKBP5Q13451 457 aaPredicted RBP18.12■□□□□ 0.49
GOPC-203ENST00000535237 CCDC66A2RUB6 948 aa18.11■□□□□ 0.49
GOPC-203ENST00000535237 RASSF8Q8NHQ8 419 aa18.11■□□□□ 0.49
GOPC-203ENST00000535237 TBC1D2Q9BYX2 928 aa18.11■□□□□ 0.49
GOPC-203ENST00000535237 SNAPC4Q5SXM2 1469 aa18.11■□□□□ 0.49
GOPC-203ENST00000535237 CASKIN1Q8WXD9 1431 aa18.11■□□□□ 0.49
GOPC-203ENST00000535237 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
GOPC-203ENST00000535237 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
GOPC-203ENST00000535237 COG3Q96JB2 828 aa18.1■□□□□ 0.49
GOPC-203ENST00000535237 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
GOPC-203ENST00000535237 CUX1P39880 1505 aa18.1■□□□□ 0.49
GOPC-203ENST00000535237 NOB1Q9ULX3 412 aaKnown RBP18.1■□□□□ 0.49
GOPC-203ENST00000535237 TOMM22Q9NS69 142 aa18.09■□□□□ 0.49
GOPC-203ENST00000535237 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
GOPC-203ENST00000535237 SLFN5Q08AF3 891 aa18.09■□□□□ 0.49
GOPC-203ENST00000535237 CCDC73Q6ZRK6 1079 aa18.09■□□□□ 0.49
GOPC-203ENST00000535237 CWC22Q9HCG8 908 aaKnown RBP18.09■□□□□ 0.49
GOPC-203ENST00000535237 SETQ01105 290 aaPredicted RBP18.08■□□□□ 0.49
GOPC-203ENST00000535237 GCC1Q96CN9 775 aa18.08■□□□□ 0.49
GOPC-203ENST00000535237 PDCL3Q9H2J4 239 aa18.08■□□□□ 0.48
GOPC-203ENST00000535237 IFIT2P09913 472 aaKnown RBP18.08■□□□□ 0.48
GOPC-203ENST00000535237 MCM2P49736 904 aa18.08■□□□□ 0.48
GOPC-203ENST00000535237 VGFO15240 615 aaPredicted RBP18.07■□□□□ 0.48
GOPC-203ENST00000535237 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
GOPC-203ENST00000535237 PRDM10Q9NQV6 1147 aa18.07■□□□□ 0.48
GOPC-203ENST00000535237 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.07■□□□□ 0.48
GOPC-203ENST00000535237 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
GOPC-203ENST00000535237 ATF7IPQ6VMQ6 1270 aa18.07■□□□□ 0.48
GOPC-203ENST00000535237 LETM1O95202 739 aaPredicted RBP18.06■□□□□ 0.48
GOPC-203ENST00000535237 FOSBP53539 338 aa18.06■□□□□ 0.48
GOPC-203ENST00000535237 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
GOPC-203ENST00000535237 NGDNQ8NEJ9 315 aaKnown RBP18.06■□□□□ 0.48
GOPC-203ENST00000535237 TPM1P09493 284 aa18.06■□□□□ 0.48
GOPC-203ENST00000535237 TSR1Q2NL82 804 aaKnown RBP18.06■□□□□ 0.48
GOPC-203ENST00000535237 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
GOPC-203ENST00000535237 C9orf78Q9NZ63 289 aaPredicted RBP18.06■□□□□ 0.48
GOPC-203ENST00000535237 CHD1LQ86WJ1 897 aa18.05■□□□□ 0.48
GOPC-203ENST00000535237 FYCO1Q9BQS8 1478 aa18.05■□□□□ 0.48
GOPC-203ENST00000535237 SDF4Q9BRK5 362 aa18.05■□□□□ 0.48
GOPC-203ENST00000535237 CHMP4CQ96CF2 233 aa18.04■□□□□ 0.48
GOPC-203ENST00000535237 SYCE3A1L190 88 aa18.04■□□□□ 0.48
GOPC-203ENST00000535237 CFAP70Q5T0N1 1121 aa18.04■□□□□ 0.48
GOPC-203ENST00000535237 CCDC112Q8NEF3 446 aa18.03■□□□□ 0.48
GOPC-203ENST00000535237 NINLQ9Y2I6 1382 aa18.03■□□□□ 0.48
GOPC-203ENST00000535237 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
GOPC-203ENST00000535237 CPLX1O14810 134 aa18.02■□□□□ 0.48
GOPC-203ENST00000535237 PRXQ9BXM0 1461 aa18.02■□□□□ 0.48
GOPC-203ENST00000535237 HSP90B2PQ58FF3 399 aa18.02■□□□□ 0.47
GOPC-203ENST00000535237 STAC3Q96MF2 364 aa18.02■□□□□ 0.47
GOPC-203ENST00000535237 CPLX2Q6PUV4 134 aaKnown RBP18.01■□□□□ 0.47
GOPC-203ENST00000535237 XRCC6P12956 609 aaKnown RBP eCLIP18.01■□□□□ 0.47
GOPC-203ENST00000535237 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
GOPC-203ENST00000535237 WDR63Q8IWG1 891 aa18.01■□□□□ 0.47
GOPC-203ENST00000535237 NAIPQ13075 1403 aa18.01■□□□□ 0.47
GOPC-203ENST00000535237 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
GOPC-203ENST00000535237 WWC1Q8IX03 1113 aa18.01■□□□□ 0.47
GOPC-203ENST00000535237 TNPO1Q92973 898 aaKnown RBP18.01■□□□□ 0.47
GOPC-203ENST00000535237 FMNL2Q96PY5 1086 aa18.01■□□□□ 0.47
GOPC-203ENST00000535237 PANK2Q9BZ23 570 aa18.01■□□□□ 0.47
GOPC-203ENST00000535237 CLCN1P35523 988 aa18■□□□□ 0.47
GOPC-203ENST00000535237 AFAP1Q8N556 730 aa18■□□□□ 0.47
GOPC-203ENST00000535237 SLC12A5Q9H2X9 1139 aa18■□□□□ 0.47
GOPC-203ENST00000535237 CBX1P83916 185 aa18■□□□□ 0.47
GOPC-203ENST00000535237 PDCL2Q8N4E4 241 aa18■□□□□ 0.47
GOPC-203ENST00000535237 CSB-PGBD3P0DP91 1061 aa18■□□□□ 0.47
GOPC-203ENST00000535237 CABP2Q9NPB3 220 aa18■□□□□ 0.47
GOPC-203ENST00000535237 KIAA1107Q9UPP5 1409 aa18■□□□□ 0.47
GOPC-203ENST00000535237 ERC2O15083 957 aa17.99■□□□□ 0.47
GOPC-203ENST00000535237 CCDC192P0DO97 292 aa17.99■□□□□ 0.47
GOPC-203ENST00000535237 CCDC70Q6NSX1 233 aa17.99■□□□□ 0.47
GOPC-203ENST00000535237 TSPYL4Q9UJ04 414 aa17.99■□□□□ 0.47
GOPC-203ENST00000535237 SYNJ1O43426 1573 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms