RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 DEFB132Q7Z7B7 95 aa15.16■□□□□ 0.02
CLSTN3-203ENST00000534830 GJD4Q96KN9 370 aaPredicted RBP15.16■□□□□ 0.02
CLSTN3-203ENST00000534830 BLMP54132 1417 aaPredicted RBP15.15■□□□□ 0.02
CLSTN3-203ENST00000534830 SF3B2Q13435 895 aaKnown RBP15.14■□□□□ 0.01
CLSTN3-203ENST00000534830 BCL9LQ86UU0 1499 aa15.14■□□□□ 0.01
CLSTN3-203ENST00000534830 LAMC1P11047 1609 aa15.14■□□□□ 0.01
CLSTN3-203ENST00000534830 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
CLSTN3-203ENST00000534830 LRP5O75197 1615 aa15.11■□□□□ 0.01
CLSTN3-203ENST00000534830 COL22A1Q8NFW1 1626 aaPredicted RBP15.11■□□□□ 0.01
CLSTN3-203ENST00000534830 PPLO60437 1756 aa15.11■□□□□ 0.01
CLSTN3-203ENST00000534830 MYOM2P54296 1465 aa15.1■□□□□ 0.01
CLSTN3-203ENST00000534830 MARF1Q9Y4F3 1742 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-203ENST00000534830 RPGRIP1LQ68CZ1 1315 aa15.09■□□□□ 0.01
CLSTN3-203ENST00000534830 PSDA5PKW4 1024 aaPredicted RBP15.08■□□□□ 0
CLSTN3-203ENST00000534830 VGFO15240 615 aaPredicted RBP15.07■□□□□ 0
CLSTN3-203ENST00000534830 XPCQ01831 940 aaPredicted RBP15.07■□□□□ 0
CLSTN3-203ENST00000534830 ESCO1Q5FWF5 840 aa15.07■□□□□ 0
CLSTN3-203ENST00000534830 UNC5CLQ8IV45 518 aa15.07■□□□□ 0
CLSTN3-203ENST00000534830 BRWD3Q6RI45 1802 aa15.07■□□□□ 0
CLSTN3-203ENST00000534830 NPHP3Q7Z494 1330 aa15.07■□□□□ 0
CLSTN3-203ENST00000534830 RALGAPBQ86X10 1494 aa15.07■□□□□ 0
CLSTN3-203ENST00000534830 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
CLSTN3-203ENST00000534830 ROBO2Q9HCK4 1378 aa15.05■□□□□ -0
CLSTN3-203ENST00000534830 GLI3P10071 1580 aa15.05■□□□□ -0
CLSTN3-203ENST00000534830 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.05■□□□□ -0
CLSTN3-203ENST00000534830 PRAG1Q86YV5 1406 aa15.04■□□□□ -0
CLSTN3-203ENST00000534830 FOXO3O43524 673 aa15.04■□□□□ -0
CLSTN3-203ENST00000534830 HRCP23327 699 aa15.04■□□□□ -0
CLSTN3-203ENST00000534830 SEPT12Q8IYM1 358 aa15.04■□□□□ -0
CLSTN3-203ENST00000534830 IFT172Q9UG01 1749 aa15.03■□□□□ -0
CLSTN3-203ENST00000534830 SPATA31E1Q6ZUB1 1445 aa15.03■□□□□ -0
CLSTN3-203ENST00000534830 ACIN1Q9UKV3 1341 aaKnown RBP15.03■□□□□ -0
CLSTN3-203ENST00000534830 PXDNQ92626 1479 aa15.02■□□□□ -0
CLSTN3-203ENST00000534830 CCDC144AA2RUR9 1427 aa15.01□□□□□ -0.01
CLSTN3-203ENST00000534830 BAG6P46379 1132 aa15.01□□□□□ -0.01
CLSTN3-203ENST00000534830 CCDC9Q9Y3X0 531 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-203ENST00000534830 SLIT2O94813 1529 aa15.01□□□□□ -0.01
CLSTN3-203ENST00000534830 KRT27Q7Z3Y8 459 aa15□□□□□ -0.01
CLSTN3-203ENST00000534830 LRPPRCP42704 1394 aaKnown RBP14.99□□□□□ -0.01
CLSTN3-203ENST00000534830 A0A0G2JS52 829 aa14.99□□□□□ -0.01
CLSTN3-203ENST00000534830 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
CLSTN3-203ENST00000534830 HAP1P54257 671 aaPredicted RBP14.99□□□□□ -0.01
CLSTN3-203ENST00000534830 MYT1Q01538 1121 aa14.99□□□□□ -0.01
CLSTN3-203ENST00000534830 ADGRF5Q8IZF2 1346 aa14.98□□□□□ -0.01
CLSTN3-203ENST00000534830 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
CLSTN3-203ENST00000534830 VPS72Q15906 364 aa14.97□□□□□ -0.01
CLSTN3-203ENST00000534830 ANKRD30BQ9BXX2 1392 aa14.97□□□□□ -0.01
CLSTN3-203ENST00000534830 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
CLSTN3-203ENST00000534830 CDC42BPGQ6DT37 1551 aa14.95□□□□□ -0.02
CLSTN3-203ENST00000534830 YY1P25490 414 aa14.95□□□□□ -0.02
CLSTN3-203ENST00000534830 R3HDM1Q15032 1099 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-203ENST00000534830 RGL3Q3MIN7 710 aa14.95□□□□□ -0.02
CLSTN3-203ENST00000534830 USP32Q8NFA0 1604 aa14.95□□□□□ -0.02
CLSTN3-203ENST00000534830 SPATA31A3Q5VYP0 1347 aa14.94□□□□□ -0.02
CLSTN3-203ENST00000534830 PIK3C2GO75747 1445 aa14.94□□□□□ -0.02
CLSTN3-203ENST00000534830 EN1Q05925 392 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-203ENST00000534830 TECPR2O15040 1411 aa14.93□□□□□ -0.02
CLSTN3-203ENST00000534830 ONECUT3O60422 494 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-203ENST00000534830 KNDC1Q76NI1 1749 aa14.92□□□□□ -0.02
CLSTN3-203ENST00000534830 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
CLSTN3-203ENST00000534830 CABLES1Q8TDN4 633 aa14.92□□□□□ -0.02
CLSTN3-203ENST00000534830 NRXN1Q9ULB1 1477 aa14.92□□□□□ -0.02
CLSTN3-203ENST00000534830 ABCC11Q96J66 1382 aa14.91□□□□□ -0.02
CLSTN3-203ENST00000534830 PLCH1Q4KWH8 1693 aa14.9□□□□□ -0.02
CLSTN3-203ENST00000534830 FAM98CQ17RN3 349 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-203ENST00000534830 WAPLQ7Z5K2 1190 aa14.9□□□□□ -0.02
CLSTN3-203ENST00000534830 STK26Q9P289 416 aa14.9□□□□□ -0.02
CLSTN3-203ENST00000534830 NWD2Q9ULI1 1742 aa14.89□□□□□ -0.03
CLSTN3-203ENST00000534830 FAM182BQ5T319 152 aa14.89□□□□□ -0.03
CLSTN3-203ENST00000534830 LMOD2Q6P5Q4 547 aa14.89□□□□□ -0.03
CLSTN3-203ENST00000534830 C14orf93Q9H972 538 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-203ENST00000534830 RGPD1P0DJD0 1748 aa14.88□□□□□ -0.03
CLSTN3-203ENST00000534830 TMEM132EQ6IEE7 984 aa14.87□□□□□ -0.03
CLSTN3-203ENST00000534830 SIRT1Q96EB6 747 aa14.87□□□□□ -0.03
CLSTN3-203ENST00000534830 TNS3Q68CZ2 1445 aa14.86□□□□□ -0.03
CLSTN3-203ENST00000534830 YTHDC2Q9H6S0 1430 aaKnown RBP14.86□□□□□ -0.03
CLSTN3-203ENST00000534830 FAM83GA6ND36 823 aa14.86□□□□□ -0.03
CLSTN3-203ENST00000534830 PSME1Q06323 249 aa14.86□□□□□ -0.03
CLSTN3-203ENST00000534830 KIF1AQ12756 1690 aa14.86□□□□□ -0.03
CLSTN3-203ENST00000534830 EZH2Q15910 746 aaKnown RBP14.85□□□□□ -0.03
CLSTN3-203ENST00000534830 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
CLSTN3-203ENST00000534830 FMN2Q9NZ56 1722 aa14.83□□□□□ -0.03
CLSTN3-203ENST00000534830 CFAP70Q5T0N1 1121 aa14.83□□□□□ -0.04
CLSTN3-203ENST00000534830 BTG4Q9NY30 223 aa14.83□□□□□ -0.04
CLSTN3-203ENST00000534830 PHF8Q9UPP1 1060 aa14.83□□□□□ -0.04
CLSTN3-203ENST00000534830 ABCA3Q99758 1704 aa14.82□□□□□ -0.04
CLSTN3-203ENST00000534830 RGPD8O14715 1765 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-203ENST00000534830 DISP2A7MBM2 1401 aa14.82□□□□□ -0.04
CLSTN3-203ENST00000534830 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
CLSTN3-203ENST00000534830 ARHGEF10O15013 1369 aa14.81□□□□□ -0.04
CLSTN3-203ENST00000534830 DHX57Q6P158 1386 aaKnown RBP14.81□□□□□ -0.04
CLSTN3-203ENST00000534830 TNS1Q9HBL0 1735 aaKnown RBP14.8□□□□□ -0.04
CLSTN3-203ENST00000534830 IFFO2Q5TF58 517 aa14.8□□□□□ -0.04
CLSTN3-203ENST00000534830 PPP1R1BQ9UD71 204 aaPredicted RBP14.8□□□□□ -0.04
CLSTN3-203ENST00000534830 SBNO1A3KN83 1393 aa14.8□□□□□ -0.04
CLSTN3-203ENST00000534830 DLC1Q96QB1 1528 aa14.8□□□□□ -0.04
CLSTN3-203ENST00000534830 ADGRB1O14514 1584 aa14.8□□□□□ -0.04
CLSTN3-203ENST00000534830 NRAPQ86VF7 1730 aa14.8□□□□□ -0.04
CLSTN3-203ENST00000534830 TRIM37O94972 964 aa14.79□□□□□ -0.04
CLSTN3-203ENST00000534830 STAC3Q96MF2 364 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms