RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 CCDC125Q86Z20 511 aa16.25■□□□□ 0.19
CTNND1-235ENST00000533189 HFM1A2PYH4 1435 aa16.25■□□□□ 0.19
CTNND1-235ENST00000533189 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
CTNND1-235ENST00000533189 MYOM2P54296 1465 aa16.22■□□□□ 0.19
CTNND1-235ENST00000533189 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
CTNND1-235ENST00000533189 ESCO1Q5FWF5 840 aa16.22■□□□□ 0.19
CTNND1-235ENST00000533189 BCL9LQ86UU0 1499 aa16.2■□□□□ 0.18
CTNND1-235ENST00000533189 CDC42BPGQ6DT37 1551 aa16.2■□□□□ 0.18
CTNND1-235ENST00000533189 PPLO60437 1756 aa16.2■□□□□ 0.18
CTNND1-235ENST00000533189 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
CTNND1-235ENST00000533189 GJD4Q96KN9 370 aaPredicted RBP16.19■□□□□ 0.18
CTNND1-235ENST00000533189 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.19■□□□□ 0.18
CTNND1-235ENST00000533189 PXDNQ92626 1479 aa16.18■□□□□ 0.18
CTNND1-235ENST00000533189 LRPPRCP42704 1394 aaKnown RBP16.18■□□□□ 0.18
CTNND1-235ENST00000533189 FOXO3O43524 673 aa16.18■□□□□ 0.18
CTNND1-235ENST00000533189 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
CTNND1-235ENST00000533189 PPARGC1BQ86YN6 1023 aaKnown RBP16.16■□□□□ 0.18
CTNND1-235ENST00000533189 BLMP54132 1417 aaPredicted RBP16.14■□□□□ 0.17
CTNND1-235ENST00000533189 NAIPQ13075 1403 aa16.14■□□□□ 0.17
CTNND1-235ENST00000533189 NUTM2FA1L443 756 aa16.14■□□□□ 0.17
CTNND1-235ENST00000533189 UNC5CLQ8IV45 518 aa16.14■□□□□ 0.17
CTNND1-235ENST00000533189 GLI3P10071 1580 aa16.13■□□□□ 0.17
CTNND1-235ENST00000533189 BRWD3Q6RI45 1802 aa16.13■□□□□ 0.17
CTNND1-235ENST00000533189 RALGAPBQ86X10 1494 aa16.13■□□□□ 0.17
CTNND1-235ENST00000533189 SF3B2Q13435 895 aaKnown RBP16.12■□□□□ 0.17
CTNND1-235ENST00000533189 STK26Q9P289 416 aa16.12■□□□□ 0.17
CTNND1-235ENST00000533189 KIF1AQ12756 1690 aa16.11■□□□□ 0.17
CTNND1-235ENST00000533189 SLIT2O94813 1529 aa16.11■□□□□ 0.17
CTNND1-235ENST00000533189 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
CTNND1-235ENST00000533189 USP32Q8NFA0 1604 aa16.1■□□□□ 0.17
CTNND1-235ENST00000533189 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
CTNND1-235ENST00000533189 WAPLQ7Z5K2 1190 aa16.1■□□□□ 0.17
CTNND1-235ENST00000533189 SPATA31A3Q5VYP0 1347 aa16.1■□□□□ 0.17
CTNND1-235ENST00000533189 FMN2Q9NZ56 1722 aa16.1■□□□□ 0.17
CTNND1-235ENST00000533189 CCDC144AA2RUR9 1427 aa16.09■□□□□ 0.17
CTNND1-235ENST00000533189 RRBP1Q9P2E9 1410 aaKnown RBP16.09■□□□□ 0.17
CTNND1-235ENST00000533189 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.17
CTNND1-235ENST00000533189 DEFB132Q7Z7B7 95 aa16.08■□□□□ 0.16
CTNND1-235ENST00000533189 TECPR2O15040 1411 aa16.08■□□□□ 0.16
CTNND1-235ENST00000533189 KRT28Q7Z3Y7 464 aa16.07■□□□□ 0.16
CTNND1-235ENST00000533189 SEPT12Q8IYM1 358 aa16.07■□□□□ 0.16
CTNND1-235ENST00000533189 CCDC9Q9Y3X0 531 aaKnown RBP16.07■□□□□ 0.16
CTNND1-235ENST00000533189 ADGRF5Q8IZF2 1346 aa16.07■□□□□ 0.16
CTNND1-235ENST00000533189 ABCC11Q96J66 1382 aa16.06■□□□□ 0.16
CTNND1-235ENST00000533189 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
CTNND1-235ENST00000533189 PLCH1Q4KWH8 1693 aa16.05■□□□□ 0.16
CTNND1-235ENST00000533189 VPS72Q15906 364 aa16.05■□□□□ 0.16
CTNND1-235ENST00000533189 RGL3Q3MIN7 710 aa16.05■□□□□ 0.16
CTNND1-235ENST00000533189 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
CTNND1-235ENST00000533189 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
CTNND1-235ENST00000533189 LRP5O75197 1615 aa16.05■□□□□ 0.16
CTNND1-235ENST00000533189 ANKRD30BQ9BXX2 1392 aa16.04■□□□□ 0.16
CTNND1-235ENST00000533189 PLEKHH1Q9ULM0 1364 aa16.04■□□□□ 0.16
CTNND1-235ENST00000533189 PSME1Q06323 249 aa16.04■□□□□ 0.16
CTNND1-235ENST00000533189 TMEM132EQ6IEE7 984 aa16.04■□□□□ 0.16
CTNND1-235ENST00000533189 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
CTNND1-235ENST00000533189 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
CTNND1-235ENST00000533189 KRT27Q7Z3Y8 459 aa16.03■□□□□ 0.16
CTNND1-235ENST00000533189 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.16
CTNND1-235ENST00000533189 CABLES1Q8TDN4 633 aa16.02■□□□□ 0.16
CTNND1-235ENST00000533189 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.16
CTNND1-235ENST00000533189 A0A0G2JS52 829 aa16.01■□□□□ 0.15
CTNND1-235ENST00000533189 MYT1Q01538 1121 aa16.01■□□□□ 0.15
CTNND1-235ENST00000533189 ABCA3Q99758 1704 aa16.01■□□□□ 0.15
CTNND1-235ENST00000533189 YTHDC2Q9H6S0 1430 aaKnown RBP16.01■□□□□ 0.15
CTNND1-235ENST00000533189 ONECUT3O60422 494 aaPredicted RBP16■□□□□ 0.15
CTNND1-235ENST00000533189 BAG6P46379 1132 aa16■□□□□ 0.15
CTNND1-235ENST00000533189 PIK3C2GO75747 1445 aa15.99■□□□□ 0.15
CTNND1-235ENST00000533189 SPATA31E1Q6ZUB1 1445 aa15.99■□□□□ 0.15
CTNND1-235ENST00000533189 SBNO1A3KN83 1393 aa15.99■□□□□ 0.15
CTNND1-235ENST00000533189 ARHGEF10O15013 1369 aa15.99■□□□□ 0.15
CTNND1-235ENST00000533189 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
CTNND1-235ENST00000533189 SIRT1Q96EB6 747 aa15.97■□□□□ 0.15
CTNND1-235ENST00000533189 NRXN1Q9ULB1 1477 aa15.97■□□□□ 0.15
CTNND1-235ENST00000533189 RGPD1P0DJD0 1748 aa15.95■□□□□ 0.14
CTNND1-235ENST00000533189 NRAPQ86VF7 1730 aa15.95■□□□□ 0.14
CTNND1-235ENST00000533189 FAM98CQ17RN3 349 aaKnown RBP15.95■□□□□ 0.14
CTNND1-235ENST00000533189 DHX57Q6P158 1386 aaKnown RBP15.95■□□□□ 0.14
CTNND1-235ENST00000533189 FAM83GA6ND36 823 aa15.94■□□□□ 0.14
CTNND1-235ENST00000533189 HRCP23327 699 aa15.94■□□□□ 0.14
CTNND1-235ENST00000533189 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
CTNND1-235ENST00000533189 BTG4Q9NY30 223 aa15.93■□□□□ 0.14
CTNND1-235ENST00000533189 COL14A1Q05707 1796 aaKnown RBP15.92■□□□□ 0.14
CTNND1-235ENST00000533189 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
CTNND1-235ENST00000533189 C14orf93Q9H972 538 aaKnown RBP15.92■□□□□ 0.14
CTNND1-235ENST00000533189 EN1Q05925 392 aaPredicted RBP15.91■□□□□ 0.14
CTNND1-235ENST00000533189 PRAM1Q96QH2 718 aa15.91■□□□□ 0.14
CTNND1-235ENST00000533189 MPHOSPH9Q99550 1183 aa15.91■□□□□ 0.14
CTNND1-235ENST00000533189 POGKQ9P215 609 aa15.91■□□□□ 0.14
CTNND1-235ENST00000533189 ANKARQ7Z5J8 1434 aa15.91■□□□□ 0.14
CTNND1-235ENST00000533189 CFAP70Q5T0N1 1121 aa15.9■□□□□ 0.14
CTNND1-235ENST00000533189 TRPM3Q9HCF6 1732 aaPredicted RBP15.9■□□□□ 0.14
CTNND1-235ENST00000533189 GPRASP1Q5JY77 1395 aa15.89■□□□□ 0.13
CTNND1-235ENST00000533189 ALS2Q96Q42 1657 aa15.89■□□□□ 0.13
CTNND1-235ENST00000533189 R3HDM1Q15032 1099 aaKnown RBP15.88■□□□□ 0.13
CTNND1-235ENST00000533189 DLC1Q96QB1 1528 aa15.88■□□□□ 0.13
CTNND1-235ENST00000533189 ADGRB2O60241 1585 aa15.87■□□□□ 0.13
CTNND1-235ENST00000533189 FAM182BQ5T319 152 aa15.87■□□□□ 0.13
CTNND1-235ENST00000533189 TNS1Q9HBL0 1735 aaKnown RBP15.87■□□□□ 0.13
CTNND1-235ENST00000533189 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms