RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 CHMP4CQ96CF2 233 aa9.85□□□□□ -0.83
CTNND1-234ENST00000532844 CABP2Q9NPB3 220 aa9.85□□□□□ -0.83
CTNND1-234ENST00000532844 PES1O00541 588 aaKnown RBP9.85□□□□□ -0.83
CTNND1-234ENST00000532844 HSP90B2PQ58FF3 399 aa9.85□□□□□ -0.83
CTNND1-234ENST00000532844 PLCD4Q9BRC7 762 aa9.85□□□□□ -0.83
CTNND1-234ENST00000532844 BECN2A8MW95 431 aa9.84□□□□□ -0.83
CTNND1-234ENST00000532844 ZKSCAN1P17029 563 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-234ENST00000532844 TPD52L1Q16890 204 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-234ENST00000532844 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-234ENST00000532844 MTERF4Q7Z6M4 381 aaKnown RBP9.84□□□□□ -0.83
CTNND1-234ENST00000532844 C22orf23Q9BZE7 217 aa9.84□□□□□ -0.83
CTNND1-234ENST00000532844 GGNBP2Q9H3C7 697 aa9.84□□□□□ -0.83
CTNND1-234ENST00000532844 CFTRP13569 1480 aa9.84□□□□□ -0.83
CTNND1-234ENST00000532844 HSP90AB3PQ58FF7 597 aa9.84□□□□□ -0.83
CTNND1-234ENST00000532844 TSPYL4Q9UJ04 414 aa9.84□□□□□ -0.83
CTNND1-234ENST00000532844 IPO7O95373 1038 aaKnown RBP9.84□□□□□ -0.83
CTNND1-234ENST00000532844 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
CTNND1-234ENST00000532844 CDCA7LQ96GN5 454 aa9.83□□□□□ -0.84
CTNND1-234ENST00000532844 EHBP1L1Q8N3D4 1523 aa9.83□□□□□ -0.84
CTNND1-234ENST00000532844 TPM2P07951 284 aa9.83□□□□□ -0.84
CTNND1-234ENST00000532844 AKAP17AQ02040 695 aaKnown RBP9.83□□□□□ -0.84
CTNND1-234ENST00000532844 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.83□□□□□ -0.84
CTNND1-234ENST00000532844 AAMPQ13685 434 aa9.82□□□□□ -0.84
CTNND1-234ENST00000532844 TMEM132EQ6IEE7 984 aa9.82□□□□□ -0.84
CTNND1-234ENST00000532844 SYNE3Q6ZMZ3 975 aa9.82□□□□□ -0.84
CTNND1-234ENST00000532844 NEFHP12036 1026 aa9.82□□□□□ -0.84
CTNND1-234ENST00000532844 PRKCSHP14314 528 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-234ENST00000532844 PPP2R1AP30153 589 aa9.82□□□□□ -0.84
CTNND1-234ENST00000532844 LRRFIP1Q32MZ4 808 aaKnown RBP9.82□□□□□ -0.84
CTNND1-234ENST00000532844 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
CTNND1-234ENST00000532844 DDX58O95786 925 aaKnown RBP9.82□□□□□ -0.84
CTNND1-234ENST00000532844 G3BP1Q13283 466 aaKnown RBP eCLIP9.82□□□□□ -0.848e-9■□□□□ 11.1
CTNND1-234ENST00000532844 RAD21O60216 631 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 NFKBIBQ15653 356 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 NOL10Q9BSC4 688 aaKnown RBP9.81□□□□□ -0.84
CTNND1-234ENST00000532844 PSME1Q06323 249 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 EFCAB5A4FU69 1503 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 NCAPD3P42695 1498 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 CDC45O75419 566 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 NUCB2P80303 420 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 CYB5RLQ6IPT4 315 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 HOMER1Q86YM7 354 aa9.81□□□□□ -0.84
CTNND1-234ENST00000532844 MTHFSP49914 203 aa9.8□□□□□ -0.84
CTNND1-234ENST00000532844 TRIM29Q14134 588 aa9.8□□□□□ -0.84
CTNND1-234ENST00000532844 BICD2Q8TD16 824 aa9.8□□□□□ -0.84
CTNND1-234ENST00000532844 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
CTNND1-234ENST00000532844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-234ENST00000532844 VPS37CA5D8V6 355 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-234ENST00000532844 PPP1R1BQ9UD71 204 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-234ENST00000532844 FAM43AQ8N2R8 423 aa9.8□□□□□ -0.84
CTNND1-234ENST00000532844 AKNAQ7Z591 1439 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 GRIN2BQ13224 1484 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 CCAR1Q8IX12 1150 aaKnown RBP9.79□□□□□ -0.84
CTNND1-234ENST00000532844 TCP11L2Q8N4U5 519 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 TIAM1Q13009 1591 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 CPLX2Q6PUV4 134 aaKnown RBP9.79□□□□□ -0.84
CTNND1-234ENST00000532844 MNS1Q8NEH6 495 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 CPLX1O14810 134 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 ERC2O15083 957 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 HSP90AB4PQ58FF6 505 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 CFAP70Q5T0N1 1121 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.79□□□□□ -0.841e-6■■■■■ 38.5
CTNND1-234ENST00000532844 FOSBP53539 338 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 AMOTL1Q8IY63 956 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 KIAA1107Q9UPP5 1409 aa9.79□□□□□ -0.84
CTNND1-234ENST00000532844 TOP2BQ02880 1626 aa9.78□□□□□ -0.84
CTNND1-234ENST00000532844 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
CTNND1-234ENST00000532844 SYNJ2O15056 1496 aa9.78□□□□□ -0.84
CTNND1-234ENST00000532844 NBPF1Q3BBV0 1214 aa9.78□□□□□ -0.84
CTNND1-234ENST00000532844 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
CTNND1-234ENST00000532844 DYDC1Q8WWB3 177 aa9.78□□□□□ -0.84
CTNND1-234ENST00000532844 TSPYL1Q9H0U9 437 aa9.77□□□□□ -0.84
CTNND1-234ENST00000532844 C9orf84Q5VXU9 1444 aa9.77□□□□□ -0.84
CTNND1-234ENST00000532844 NBPF8Q3BBV2 869 aa9.77□□□□□ -0.85
CTNND1-234ENST00000532844 UBTFL1P0CB47 393 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-234ENST00000532844 PDZRN3Q9UPQ7 1066 aa9.77□□□□□ -0.85
CTNND1-234ENST00000532844 NUTM2GQ5VZR2 741 aa9.77□□□□□ -0.85
CTNND1-234ENST00000532844 ERCC4Q92889 916 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-234ENST00000532844 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.85
CTNND1-234ENST00000532844 NFXL1Q6ZNB6 911 aa9.77□□□□□ -0.85
CTNND1-234ENST00000532844 SUPT6HQ7KZ85 1726 aaKnown RBP9.76□□□□□ -0.85
CTNND1-234ENST00000532844 WDR97A6NE52 1622 aa9.76□□□□□ -0.85
CTNND1-234ENST00000532844 SCAPERQ9BY12 1400 aa9.76□□□□□ -0.85
CTNND1-234ENST00000532844 EXOSC9Q06265 439 aaKnown RBP9.76□□□□□ -0.85
CTNND1-234ENST00000532844 AIMP1Q12904 312 aaKnown RBP9.76□□□□□ -0.85
CTNND1-234ENST00000532844 TRDNQ13061 729 aa9.76□□□□□ -0.85
CTNND1-234ENST00000532844 ZRSR2Q15696 482 aaKnown RBP9.76□□□□□ -0.85
CTNND1-234ENST00000532844 SASS6Q6UVJ0 657 aa9.76□□□□□ -0.85
CTNND1-234ENST00000532844 RIC3Q7Z5B4 369 aa9.76□□□□□ -0.85
CTNND1-234ENST00000532844 ANKRD20A12PQ8NF67 263 aa9.76□□□□□ -0.85
CTNND1-234ENST00000532844 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
CTNND1-234ENST00000532844 FAM69CQ0P6D2 419 aa9.76□□□□□ -0.85
CTNND1-234ENST00000532844 AFAP1Q8N556 730 aa9.76□□□□□ -0.85
CTNND1-234ENST00000532844 LEKR1Q6ZMV7 388 aa9.75□□□□□ -0.85
CTNND1-234ENST00000532844 SYTL4Q96C24 671 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-234ENST00000532844 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
CTNND1-234ENST00000532844 BCAR3O75815 825 aa9.75□□□□□ -0.85
CTNND1-234ENST00000532844 PRKAR2BP31323 418 aa9.75□□□□□ -0.85
CTNND1-234ENST00000532844 NOB1Q9ULX3 412 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms