RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 PPLO60437 1756 aa22.8■■□□□ 1.24
DEPDC7-204ENST00000532078 PTCH1Q13635 1447 aa22.8■■□□□ 1.24
DEPDC7-204ENST00000532078 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
DEPDC7-204ENST00000532078 PRAG1Q86YV5 1406 aa22.76■■□□□ 1.23
DEPDC7-204ENST00000532078 MEX3CQ5U5Q3 659 aaKnown RBP22.76■■□□□ 1.23
DEPDC7-204ENST00000532078 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
DEPDC7-204ENST00000532078 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
DEPDC7-204ENST00000532078 ROBO2Q9HCK4 1378 aa22.72■■□□□ 1.23
DEPDC7-204ENST00000532078 ZBTB12Q9Y330 459 aaPredicted RBP22.7■■□□□ 1.22
DEPDC7-204ENST00000532078 C1orf167Q5SNV9 1468 aa22.7■■□□□ 1.22
DEPDC7-204ENST00000532078 ZNF772Q68DY9 489 aaPredicted RBP22.69■■□□□ 1.22
DEPDC7-204ENST00000532078 SPATA31E1Q6ZUB1 1445 aa22.67■■□□□ 1.22
DEPDC7-204ENST00000532078 LRRC59Q96AG4 307 aaKnown RBP22.67■■□□□ 1.22
DEPDC7-204ENST00000532078 IFT172Q9UG01 1749 aa22.67■■□□□ 1.22
DEPDC7-204ENST00000532078 LAMC1P11047 1609 aa22.67■■□□□ 1.22
DEPDC7-204ENST00000532078 NUTM2BA6NNL0 878 aaPredicted RBP22.66■■□□□ 1.22
DEPDC7-204ENST00000532078 NUTM2EB1AL46 878 aaPredicted RBP22.66■■□□□ 1.22
DEPDC7-204ENST00000532078 NUTM2AQ8IVF1 878 aaPredicted RBP22.66■■□□□ 1.22
DEPDC7-204ENST00000532078 ANKRD30BQ9BXX2 1392 aa22.65■■□□□ 1.22
DEPDC7-204ENST00000532078 MPHOSPH9Q99550 1183 aa22.65■■□□□ 1.22
DEPDC7-204ENST00000532078 CDC42BPGQ6DT37 1551 aa22.64■■□□□ 1.22
DEPDC7-204ENST00000532078 ACIN1Q9UKV3 1341 aaKnown RBP22.64■■□□□ 1.22
DEPDC7-204ENST00000532078 PNPLA6Q8IY17 1366 aa22.63■■□□□ 1.21
DEPDC7-204ENST00000532078 DDX17Q92841 729 aaKnown RBP22.62■■□□□ 1.21
DEPDC7-204ENST00000532078 ADGRF5Q8IZF2 1346 aa22.61■■□□□ 1.21
DEPDC7-204ENST00000532078 RGL3Q3MIN7 710 aa22.61■■□□□ 1.21
DEPDC7-204ENST00000532078 TECPR2O15040 1411 aa22.6■■□□□ 1.21
DEPDC7-204ENST00000532078 KNDC1Q76NI1 1749 aa22.59■■□□□ 1.21
DEPDC7-204ENST00000532078 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
DEPDC7-204ENST00000532078 AFF2P51816 1311 aa22.57■■□□□ 1.2
DEPDC7-204ENST00000532078 ORAI2Q96SN7 254 aa22.57■■□□□ 1.2
DEPDC7-204ENST00000532078 LRPPRCP42704 1394 aaKnown RBP22.57■■□□□ 1.2
DEPDC7-204ENST00000532078 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
DEPDC7-204ENST00000532078 CDK12Q9NYV4 1490 aaPredicted RBP22.56■■□□□ 1.2
DEPDC7-204ENST00000532078 RXRBP28702 533 aa22.55■■□□□ 1.2
DEPDC7-204ENST00000532078 ABCC11Q96J66 1382 aa22.53■■□□□ 1.2
DEPDC7-204ENST00000532078 C8orf37Q96NL8 207 aa22.53■■□□□ 1.2
DEPDC7-204ENST00000532078 STK26Q9P289 416 aa22.53■■□□□ 1.2
DEPDC7-204ENST00000532078 COL22A1Q8NFW1 1626 aaPredicted RBP22.52■■□□□ 1.2
DEPDC7-204ENST00000532078 MYOM2P54296 1465 aa22.51■■□□□ 1.19
DEPDC7-204ENST00000532078 NPHP3Q7Z494 1330 aa22.51■■□□□ 1.19
DEPDC7-204ENST00000532078 YTHDC2Q9H6S0 1430 aaKnown RBP22.5■■□□□ 1.19
DEPDC7-204ENST00000532078 NRXN1Q9ULB1 1477 aa22.49■■□□□ 1.19
DEPDC7-204ENST00000532078 ESCO1Q5FWF5 840 aa22.49■■□□□ 1.19
DEPDC7-204ENST00000532078 RAB3GAP2Q9H2M9 1393 aa22.49■■□□□ 1.19
DEPDC7-204ENST00000532078 PXDNQ92626 1479 aa22.48■■□□□ 1.19
DEPDC7-204ENST00000532078 TMEM132EQ6IEE7 984 aa22.48■■□□□ 1.19
DEPDC7-204ENST00000532078 WAPLQ7Z5K2 1190 aa22.48■■□□□ 1.19
DEPDC7-204ENST00000532078 FMN2Q9NZ56 1722 aa22.48■■□□□ 1.19
DEPDC7-204ENST00000532078 ADAMTS2O95450 1211 aa22.47■■□□□ 1.19
DEPDC7-204ENST00000532078 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
DEPDC7-204ENST00000532078 NGLY1Q96IV0 654 aa22.46■■□□□ 1.19
DEPDC7-204ENST00000532078 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
DEPDC7-204ENST00000532078 RBM6P78332 1123 aaKnown RBP22.44■■□□□ 1.18
DEPDC7-204ENST00000532078 C14orf93Q9H972 538 aaKnown RBP22.44■■□□□ 1.18
DEPDC7-204ENST00000532078 QTRT2Q9H974 415 aaKnown RBP22.44■■□□□ 1.18
DEPDC7-204ENST00000532078 RGS12O14924 1447 aa22.43■■□□□ 1.18
DEPDC7-204ENST00000532078 UPF1Q92900 1129 aaKnown RBP eCLIP22.43■■□□□ 1.18
DEPDC7-204ENST00000532078 DHX57Q6P158 1386 aaKnown RBP22.42■■□□□ 1.18
DEPDC7-204ENST00000532078 FOXO3O43524 673 aa22.42■■□□□ 1.18
DEPDC7-204ENST00000532078 SIRT1Q96EB6 747 aa22.42■■□□□ 1.18
DEPDC7-204ENST00000532078 NUTM2FA1L443 756 aa22.41■■□□□ 1.18
DEPDC7-204ENST00000532078 XPCQ01831 940 aaPredicted RBP22.39■■□□□ 1.17
DEPDC7-204ENST00000532078 CFAP70Q5T0N1 1121 aa22.39■■□□□ 1.17
DEPDC7-204ENST00000532078 USP21Q9UK80 565 aa22.39■■□□□ 1.17
DEPDC7-204ENST00000532078 MARF1Q9Y4F3 1742 aaKnown RBP22.39■■□□□ 1.17
DEPDC7-204ENST00000532078 DLC1Q96QB1 1528 aa22.37■■□□□ 1.17
DEPDC7-204ENST00000532078 FNBP4Q8N3X1 1017 aaPredicted RBP22.37■■□□□ 1.17
DEPDC7-204ENST00000532078 TRPC5Q9UL62 973 aaPredicted RBP22.36■■□□□ 1.17
DEPDC7-204ENST00000532078 ATRNO75882 1429 aa22.34■■□□□ 1.17
DEPDC7-204ENST00000532078 ADGRB1O14514 1584 aa22.33■■□□□ 1.17
DEPDC7-204ENST00000532078 ADGRB2O60241 1585 aa22.33■■□□□ 1.17
DEPDC7-204ENST00000532078 PRAM1Q96QH2 718 aa22.33■■□□□ 1.17
DEPDC7-204ENST00000532078 RGPD8O14715 1765 aaPredicted RBP22.33■■□□□ 1.16
DEPDC7-204ENST00000532078 SPATA31A3Q5VYP0 1347 aa22.32■■□□□ 1.16
DEPDC7-204ENST00000532078 MKRN4PQ13434 485 aaPredicted RBP22.3■■□□□ 1.16
DEPDC7-204ENST00000532078 SAFB2Q14151 953 aaKnown RBP eCLIP22.3■■□□□ 1.16
DEPDC7-204ENST00000532078 KRT28Q7Z3Y7 464 aa22.3■■□□□ 1.16
DEPDC7-204ENST00000532078 RBM42Q9BTD8 480 aaKnown RBP22.3■■□□□ 1.16
DEPDC7-204ENST00000532078 POGKQ9P215 609 aa22.3■■□□□ 1.16
DEPDC7-204ENST00000532078 PHF8Q9UPP1 1060 aa22.3■■□□□ 1.16
DEPDC7-204ENST00000532078 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.3■■□□□ 1.16
DEPDC7-204ENST00000532078 TNS3Q68CZ2 1445 aa22.3■■□□□ 1.16
DEPDC7-204ENST00000532078 ANKARQ7Z5J8 1434 aa22.3■■□□□ 1.16
DEPDC7-204ENST00000532078 BCL9LQ86UU0 1499 aa22.29■■□□□ 1.16
DEPDC7-204ENST00000532078 ATAD2Q6PL18 1390 aa22.29■■□□□ 1.16
DEPDC7-204ENST00000532078 USP32Q8NFA0 1604 aa22.29■■□□□ 1.16
DEPDC7-204ENST00000532078 HRCP23327 699 aa22.29■■□□□ 1.16
DEPDC7-204ENST00000532078 PSME1Q06323 249 aa22.27■■□□□ 1.16
DEPDC7-204ENST00000532078 STAC3Q96MF2 364 aa22.27■■□□□ 1.16
DEPDC7-204ENST00000532078 DCAF11Q8TEB1 546 aa22.26■■□□□ 1.15
DEPDC7-204ENST00000532078 SBNO1A3KN83 1393 aa22.25■■□□□ 1.15
DEPDC7-204ENST00000532078 EIF3AQ14152 1382 aaKnown RBP22.25■■□□□ 1.15
DEPDC7-204ENST00000532078 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
DEPDC7-204ENST00000532078 SLIT2O94813 1529 aa22.24■■□□□ 1.15
DEPDC7-204ENST00000532078 ARHGEF10O15013 1369 aa22.24■■□□□ 1.15
DEPDC7-204ENST00000532078 ABCA3Q99758 1704 aa22.23■■□□□ 1.15
DEPDC7-204ENST00000532078 TRAK1Q9UPV9 953 aa22.23■■□□□ 1.15
DEPDC7-204ENST00000532078 HAP1P54257 671 aaPredicted RBP22.22■■□□□ 1.15
DEPDC7-204ENST00000532078 TULP4Q9NRJ4 1543 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms