RNA–Protein interactions for RNA: ENST00000531257.1

FOXRED1-211, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-211ENST00000531257 RGPD8O14715 1765 aaPredicted RBP16.92■□□□□ 0.3
FOXRED1-211ENST00000531257 PIK3C2GO75747 1445 aa16.91■□□□□ 0.3
FOXRED1-211ENST00000531257 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
FOXRED1-211ENST00000531257 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
FOXRED1-211ENST00000531257 ADAMTS2O95450 1211 aa16.9■□□□□ 0.3
FOXRED1-211ENST00000531257 RXRBP28702 533 aa16.9■□□□□ 0.3
FOXRED1-211ENST00000531257 ESCO1Q5FWF5 840 aa16.9■□□□□ 0.3
FOXRED1-211ENST00000531257 ACIN1Q9UKV3 1341 aaKnown RBP16.9■□□□□ 0.3
FOXRED1-211ENST00000531257 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
FOXRED1-211ENST00000531257 RAB3GAP2Q9H2M9 1393 aa16.89■□□□□ 0.3
FOXRED1-211ENST00000531257 MARF1Q9Y4F3 1742 aaKnown RBP16.89■□□□□ 0.29
FOXRED1-211ENST00000531257 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.29
FOXRED1-211ENST00000531257 SOS2Q07890 1332 aaPredicted RBP16.88■□□□□ 0.29
FOXRED1-211ENST00000531257 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
FOXRED1-211ENST00000531257 TECPR2O15040 1411 aa16.87■□□□□ 0.29
FOXRED1-211ENST00000531257 PLEKHH1Q9ULM0 1364 aa16.87■□□□□ 0.29
FOXRED1-211ENST00000531257 YTHDC2Q9H6S0 1430 aaKnown RBP16.87■□□□□ 0.29
FOXRED1-211ENST00000531257 NGLY1Q96IV0 654 aa16.86■□□□□ 0.29
FOXRED1-211ENST00000531257 ABCC11Q96J66 1382 aa16.86■□□□□ 0.29
FOXRED1-211ENST00000531257 KIF1AQ12756 1690 aa16.85■□□□□ 0.29
FOXRED1-211ENST00000531257 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
FOXRED1-211ENST00000531257 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
FOXRED1-211ENST00000531257 FOXO3O43524 673 aa16.84■□□□□ 0.29
FOXRED1-211ENST00000531257 QTRT2Q9H974 415 aaKnown RBP16.84■□□□□ 0.29
FOXRED1-211ENST00000531257 MYOM2P54296 1465 aa16.84■□□□□ 0.29
FOXRED1-211ENST00000531257 CFAP70Q5T0N1 1121 aa16.83■□□□□ 0.28
FOXRED1-211ENST00000531257 PXDNQ92626 1479 aa16.83■□□□□ 0.28
FOXRED1-211ENST00000531257 CDK12Q9NYV4 1490 aaPredicted RBP16.83■□□□□ 0.28
FOXRED1-211ENST00000531257 NRXN1Q9ULB1 1477 aa16.82■□□□□ 0.28
FOXRED1-211ENST00000531257 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
FOXRED1-211ENST00000531257 C14orf93Q9H972 538 aaKnown RBP16.82■□□□□ 0.28
FOXRED1-211ENST00000531257 RBM6P78332 1123 aaKnown RBP16.8■□□□□ 0.28
FOXRED1-211ENST00000531257 SAFB2Q14151 953 aaKnown RBP eCLIP16.8■□□□□ 0.28
FOXRED1-211ENST00000531257 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
FOXRED1-211ENST00000531257 USP21Q9UK80 565 aa16.8■□□□□ 0.28
FOXRED1-211ENST00000531257 RGS12O14924 1447 aa16.79■□□□□ 0.28
FOXRED1-211ENST00000531257 PRAM1Q96QH2 718 aa16.77■□□□□ 0.28
FOXRED1-211ENST00000531257 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.28
FOXRED1-211ENST00000531257 SIRT1Q96EB6 747 aa16.76■□□□□ 0.27
FOXRED1-211ENST00000531257 POGKQ9P215 609 aa16.76■□□□□ 0.27
FOXRED1-211ENST00000531257 TRPC5Q9UL62 973 aaPredicted RBP16.75■□□□□ 0.27
FOXRED1-211ENST00000531257 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
FOXRED1-211ENST00000531257 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
FOXRED1-211ENST00000531257 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
FOXRED1-211ENST00000531257 KRT28Q7Z3Y7 464 aa16.74■□□□□ 0.27
FOXRED1-211ENST00000531257 DCAF11Q8TEB1 546 aa16.74■□□□□ 0.27
FOXRED1-211ENST00000531257 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-211ENST00000531257 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
FOXRED1-211ENST00000531257 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
FOXRED1-211ENST00000531257 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
FOXRED1-211ENST00000531257 TRAK1Q9UPV9 953 aa16.73■□□□□ 0.27
FOXRED1-211ENST00000531257 ABCA3Q99758 1704 aa16.73■□□□□ 0.27
FOXRED1-211ENST00000531257 SPATA31A3Q5VYP0 1347 aa16.72■□□□□ 0.27
FOXRED1-211ENST00000531257 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
FOXRED1-211ENST00000531257 ATRNO75882 1429 aa16.71■□□□□ 0.27
FOXRED1-211ENST00000531257 ARHGEF28Q8N1W1 1705 aaKnown RBP16.71■□□□□ 0.27
FOXRED1-211ENST00000531257 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
FOXRED1-211ENST00000531257 PLCH1Q4KWH8 1693 aa16.7■□□□□ 0.26
FOXRED1-211ENST00000531257 PSME1Q06323 249 aa16.7■□□□□ 0.26
FOXRED1-211ENST00000531257 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
FOXRED1-211ENST00000531257 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
FOXRED1-211ENST00000531257 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
FOXRED1-211ENST00000531257 BCL9LQ86UU0 1499 aa16.69■□□□□ 0.26
FOXRED1-211ENST00000531257 PMFBP1Q8TBY8 1022 aa16.69■□□□□ 0.26
FOXRED1-211ENST00000531257 MINK1Q8N4C8 1332 aaPredicted RBP16.69■□□□□ 0.26
FOXRED1-211ENST00000531257 ITSN1Q15811 1721 aa16.67■□□□□ 0.26
FOXRED1-211ENST00000531257 ATAD2Q6PL18 1390 aa16.67■□□□□ 0.26
FOXRED1-211ENST00000531257 HRCP23327 699 aa16.67■□□□□ 0.26
FOXRED1-211ENST00000531257 CABLES1Q8TDN4 633 aa16.67■□□□□ 0.26
FOXRED1-211ENST00000531257 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
FOXRED1-211ENST00000531257 TRPM3Q9HCF6 1732 aaPredicted RBP16.67■□□□□ 0.26
FOXRED1-211ENST00000531257 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
FOXRED1-211ENST00000531257 NWD2Q9ULI1 1742 aa16.66■□□□□ 0.26
FOXRED1-211ENST00000531257 GJD4Q96KN9 370 aaPredicted RBP16.65■□□□□ 0.26
FOXRED1-211ENST00000531257 TULP4Q9NRJ4 1543 aa16.65■□□□□ 0.26
FOXRED1-211ENST00000531257 SBNO1A3KN83 1393 aa16.64■□□□□ 0.26
FOXRED1-211ENST00000531257 GLI3P10071 1580 aa16.64■□□□□ 0.25
FOXRED1-211ENST00000531257 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
FOXRED1-211ENST00000531257 ALS2Q96Q42 1657 aa16.64■□□□□ 0.25
FOXRED1-211ENST00000531257 SLIT2O94813 1529 aa16.64■□□□□ 0.25
FOXRED1-211ENST00000531257 ARHGEF10O15013 1369 aa16.64■□□□□ 0.25
FOXRED1-211ENST00000531257 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.25
FOXRED1-211ENST00000531257 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
FOXRED1-211ENST00000531257 UNC5CLQ8IV45 518 aa16.63■□□□□ 0.25
FOXRED1-211ENST00000531257 EP400Q96L91 3159 aa16.62■□□□□ 0.25
FOXRED1-211ENST00000531257 RALGAPBQ86X10 1494 aa16.61■□□□□ 0.25
FOXRED1-211ENST00000531257 WASLO00401 505 aaPredicted RBP16.61■□□□□ 0.25
FOXRED1-211ENST00000531257 PRR36Q9H6K5 1346 aa16.61■□□□□ 0.25
FOXRED1-211ENST00000531257 GPRASP1Q5JY77 1395 aa16.61■□□□□ 0.25
FOXRED1-211ENST00000531257 CCDC9Q9Y3X0 531 aaKnown RBP16.6■□□□□ 0.25
FOXRED1-211ENST00000531257 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
FOXRED1-211ENST00000531257 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
FOXRED1-211ENST00000531257 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
FOXRED1-211ENST00000531257 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
FOXRED1-211ENST00000531257 COL14A1Q05707 1796 aaKnown RBP16.58■□□□□ 0.24
FOXRED1-211ENST00000531257 TOPAZ1Q8N9V7 1692 aa16.56■□□□□ 0.24
FOXRED1-211ENST00000531257 ATP7BP35670 1465 aa16.55■□□□□ 0.24
FOXRED1-211ENST00000531257 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
FOXRED1-211ENST00000531257 PHRF1Q9P1Y6 1649 aaKnown RBP16.55■□□□□ 0.24
FOXRED1-211ENST00000531257 QRICH2Q9H0J4 1663 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms