RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 ITGAEP38570 1179 aa25.79■■□□□ 1.72
UBXN1-210ENST00000529640 HFM1A2PYH4 1435 aa25.77■■□□□ 1.72
UBXN1-210ENST00000529640 CDC42BPGQ6DT37 1551 aa25.75■■□□□ 1.71
UBXN1-210ENST00000529640 BCL9LQ86UU0 1499 aa25.75■■□□□ 1.71
UBXN1-210ENST00000529640 CCDC125Q86Z20 511 aa25.75■■□□□ 1.71
UBXN1-210ENST00000529640 VGFO15240 615 aaPredicted RBP25.74■■□□□ 1.71
UBXN1-210ENST00000529640 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.74■■□□□ 1.71
UBXN1-210ENST00000529640 PXDNQ92626 1479 aa25.73■■□□□ 1.71
UBXN1-210ENST00000529640 PPLO60437 1756 aa25.72■■□□□ 1.71
UBXN1-210ENST00000529640 NPHP3Q7Z494 1330 aa25.72■■□□□ 1.71
UBXN1-210ENST00000529640 RPGRIP1LQ68CZ1 1315 aa25.66■■□□□ 1.7
UBXN1-210ENST00000529640 ESCO1Q5FWF5 840 aa25.66■■□□□ 1.7
UBXN1-210ENST00000529640 GJD4Q96KN9 370 aaPredicted RBP25.66■■□□□ 1.7
UBXN1-210ENST00000529640 GLI3P10071 1580 aa25.64■■□□□ 1.69
UBXN1-210ENST00000529640 LRPPRCP42704 1394 aaKnown RBP25.62■■□□□ 1.69
UBXN1-210ENST00000529640 BRWD3Q6RI45 1802 aa25.62■■□□□ 1.69
UBXN1-210ENST00000529640 BLMP54132 1417 aaPredicted RBP25.62■■□□□ 1.69
UBXN1-210ENST00000529640 FOXO3O43524 673 aa25.61■■□□□ 1.69
UBXN1-210ENST00000529640 SLIT2O94813 1529 aa25.61■■□□□ 1.69
UBXN1-210ENST00000529640 NAIPQ13075 1403 aa25.61■■□□□ 1.69
UBXN1-210ENST00000529640 RALGAPBQ86X10 1494 aa25.6■■□□□ 1.69
UBXN1-210ENST00000529640 XPCQ01831 940 aaPredicted RBP25.6■■□□□ 1.69
UBXN1-210ENST00000529640 USP32Q8NFA0 1604 aa25.58■■□□□ 1.69
UBXN1-210ENST00000529640 KIF1AQ12756 1690 aa25.58■■□□□ 1.68
UBXN1-210ENST00000529640 TECPR2O15040 1411 aa25.57■■□□□ 1.68
UBXN1-210ENST00000529640 UNC5CLQ8IV45 518 aa25.57■■□□□ 1.68
UBXN1-210ENST00000529640 KNDC1Q76NI1 1749 aa25.57■■□□□ 1.68
UBXN1-210ENST00000529640 FMN2Q9NZ56 1722 aa25.56■■□□□ 1.68
UBXN1-210ENST00000529640 LRP5O75197 1615 aa25.55■■□□□ 1.68
UBXN1-210ENST00000529640 SPATA31A3Q5VYP0 1347 aa25.53■■□□□ 1.68
UBXN1-210ENST00000529640 CCDC144AA2RUR9 1427 aa25.53■■□□□ 1.68
UBXN1-210ENST00000529640 RRBP1Q9P2E9 1410 aaKnown RBP25.51■■□□□ 1.67
UBXN1-210ENST00000529640 IFT172Q9UG01 1749 aa25.51■■□□□ 1.67
UBXN1-210ENST00000529640 NWD2Q9ULI1 1742 aa25.51■■□□□ 1.67
UBXN1-210ENST00000529640 PLCH1Q4KWH8 1693 aa25.5■■□□□ 1.67
UBXN1-210ENST00000529640 NUTM2FA1L443 756 aa25.49■■□□□ 1.67
UBXN1-210ENST00000529640 ADGRF5Q8IZF2 1346 aa25.48■■□□□ 1.67
UBXN1-210ENST00000529640 WAPLQ7Z5K2 1190 aa25.48■■□□□ 1.67
UBXN1-210ENST00000529640 DEFB132Q7Z7B7 95 aa25.48■■□□□ 1.67
UBXN1-210ENST00000529640 PPARGC1BQ86YN6 1023 aaKnown RBP25.48■■□□□ 1.67
UBXN1-210ENST00000529640 ABCC11Q96J66 1382 aa25.47■■□□□ 1.67
UBXN1-210ENST00000529640 ABCA3Q99758 1704 aa25.47■■□□□ 1.67
UBXN1-210ENST00000529640 SLC4A1APQ9BWU0 796 aaKnown RBP25.47■■□□□ 1.67
UBXN1-210ENST00000529640 PLEKHH1Q9ULM0 1364 aa25.46■■□□□ 1.67
UBXN1-210ENST00000529640 SF3B2Q13435 895 aaKnown RBP25.46■■□□□ 1.67
UBXN1-210ENST00000529640 STK26Q9P289 416 aa25.46■■□□□ 1.67
UBXN1-210ENST00000529640 RGPD8O14715 1765 aaPredicted RBP25.46■■□□□ 1.67
UBXN1-210ENST00000529640 SEPT12Q8IYM1 358 aa25.45■■□□□ 1.66
UBXN1-210ENST00000529640 TNS3Q68CZ2 1445 aa25.45■■□□□ 1.66
UBXN1-210ENST00000529640 VPS72Q15906 364 aa25.44■■□□□ 1.66
UBXN1-210ENST00000529640 ANKRD30BQ9BXX2 1392 aa25.43■■□□□ 1.66
UBXN1-210ENST00000529640 KRT28Q7Z3Y7 464 aa25.42■■□□□ 1.66
UBXN1-210ENST00000529640 PIK3C2GO75747 1445 aa25.41■■□□□ 1.66
UBXN1-210ENST00000529640 SPATA31E1Q6ZUB1 1445 aa25.41■■□□□ 1.66
UBXN1-210ENST00000529640 ONECUT3O60422 494 aaPredicted RBP25.41■■□□□ 1.66
UBXN1-210ENST00000529640 YTHDC2Q9H6S0 1430 aaKnown RBP25.39■■□□□ 1.66
UBXN1-210ENST00000529640 HAP1P54257 671 aaPredicted RBP25.39■■□□□ 1.66
UBXN1-210ENST00000529640 TMEM132EQ6IEE7 984 aa25.38■■□□□ 1.65
UBXN1-210ENST00000529640 KRT27Q7Z3Y8 459 aa25.38■■□□□ 1.65
UBXN1-210ENST00000529640 NRAPQ86VF7 1730 aa25.37■■□□□ 1.65
UBXN1-210ENST00000529640 NRXN1Q9ULB1 1477 aa25.36■■□□□ 1.65
UBXN1-210ENST00000529640 SBNO1A3KN83 1393 aa25.36■■□□□ 1.65
UBXN1-210ENST00000529640 PSME1Q06323 249 aa25.36■■□□□ 1.65
UBXN1-210ENST00000529640 PHF8Q9UPP1 1060 aa25.36■■□□□ 1.65
UBXN1-210ENST00000529640 RGL3Q3MIN7 710 aa25.35■■□□□ 1.65
UBXN1-210ENST00000529640 CABLES1Q8TDN4 633 aa25.35■■□□□ 1.65
UBXN1-210ENST00000529640 CCDC9Q9Y3X0 531 aaKnown RBP25.35■■□□□ 1.65
UBXN1-210ENST00000529640 ARHGEF10O15013 1369 aa25.34■■□□□ 1.65
UBXN1-210ENST00000529640 SIRT1Q96EB6 747 aa25.34■■□□□ 1.65
UBXN1-210ENST00000529640 BAG6P46379 1132 aa25.32■■□□□ 1.64
UBXN1-210ENST00000529640 RGPD1P0DJD0 1748 aa25.32■■□□□ 1.64
UBXN1-210ENST00000529640 PSDA5PKW4 1024 aaPredicted RBP25.29■■□□□ 1.64
UBXN1-210ENST00000529640 HRCP23327 699 aa25.29■■□□□ 1.64
UBXN1-210ENST00000529640 FAM83GA6ND36 823 aa25.28■■□□□ 1.64
UBXN1-210ENST00000529640 TRPM3Q9HCF6 1732 aaPredicted RBP25.28■■□□□ 1.64
UBXN1-210ENST00000529640 COL14A1Q05707 1796 aaKnown RBP25.27■■□□□ 1.64
UBXN1-210ENST00000529640 PLEKHG5O94827 1062 aa25.26■■□□□ 1.63
UBXN1-210ENST00000529640 LMOD2Q6P5Q4 547 aa25.26■■□□□ 1.63
UBXN1-210ENST00000529640 A0A0G2JS52 829 aa25.25■■□□□ 1.63
UBXN1-210ENST00000529640 MYT1Q01538 1121 aa25.25■■□□□ 1.63
UBXN1-210ENST00000529640 ANKARQ7Z5J8 1434 aa25.25■■□□□ 1.63
UBXN1-210ENST00000529640 ALS2Q96Q42 1657 aa25.25■■□□□ 1.63
UBXN1-210ENST00000529640 TNS1Q9HBL0 1735 aaKnown RBP25.24■■□□□ 1.63
UBXN1-210ENST00000529640 ADGRB2O60241 1585 aa25.24■■□□□ 1.63
UBXN1-210ENST00000529640 FAM98CQ17RN3 349 aaKnown RBP25.24■■□□□ 1.63
UBXN1-210ENST00000529640 C14orf93Q9H972 538 aaKnown RBP25.24■■□□□ 1.63
UBXN1-210ENST00000529640 DHX57Q6P158 1386 aaKnown RBP25.23■■□□□ 1.63
UBXN1-210ENST00000529640 DISP2A7MBM2 1401 aa25.22■■□□□ 1.63
UBXN1-210ENST00000529640 THSD7AQ9UPZ6 1657 aa25.22■■□□□ 1.63
UBXN1-210ENST00000529640 DLC1Q96QB1 1528 aa25.22■■□□□ 1.63
UBXN1-210ENST00000529640 CRYBG1Q9Y4K1 1723 aa25.2■■□□□ 1.63
UBXN1-210ENST00000529640 BTG4Q9NY30 223 aa25.2■■□□□ 1.62
UBXN1-210ENST00000529640 EN1Q05925 392 aaPredicted RBP25.19■■□□□ 1.62
UBXN1-210ENST00000529640 PRAM1Q96QH2 718 aa25.19■■□□□ 1.62
UBXN1-210ENST00000529640 MPHOSPH9Q99550 1183 aa25.19■■□□□ 1.62
UBXN1-210ENST00000529640 PMFBP1Q8TBY8 1022 aa25.18■■□□□ 1.62
UBXN1-210ENST00000529640 SAFB2Q14151 953 aaKnown RBP eCLIP25.17■■□□□ 1.62
UBXN1-210ENST00000529640 CFAP70Q5T0N1 1121 aa25.17■■□□□ 1.62
UBXN1-210ENST00000529640 SPATA31A5Q5VU36 1347 aa25.16■■□□□ 1.62
UBXN1-210ENST00000529640 SPATA31A7Q8IWB4 1347 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms