RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 NISCHQ9Y2I1 1504 aa43.22■■■■■ 4.51
UBXN1-210ENST00000529640 ABCC9O60706 1549 aa39.5■■■■□ 3.91
UBXN1-210ENST00000529640 CCDC180Q9P1Z9 1646 aa39.11■■■■□ 3.85
UBXN1-210ENST00000529640 DNAJC5BQ9UF47 199 aa37.5■■■■□ 3.59
UBXN1-210ENST00000529640 RB1CC1Q8TDY2 1594 aa37.43■■■■□ 3.58
UBXN1-210ENST00000529640 NACADO15069 1562 aa37.05■■■■□ 3.52
UBXN1-210ENST00000529640 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
UBXN1-210ENST00000529640 PABPN1Q86U42 306 aaKnown RBP eCLIP36.63■■■■□ 3.45
UBXN1-210ENST00000529640 DCAF8L2P0C7V8 631 aa36.54■■■■□ 3.44
UBXN1-210ENST00000529640 MYO15BQ96JP2 1530 aa36.39■■■■□ 3.42
UBXN1-210ENST00000529640 BICRAQ9NZM4 1560 aa36.37■■■■□ 3.41
UBXN1-210ENST00000529640 SHROOM4Q9ULL8 1493 aa35.87■■■■□ 3.33
UBXN1-210ENST00000529640 ZCCHC6Q5VYS8 1495 aaKnown RBP35.73■■■■□ 3.31
UBXN1-210ENST00000529640 DCAF1Q9Y4B6 1507 aa35.72■■■■□ 3.31
UBXN1-210ENST00000529640 CC2D2AQ9P2K1 1620 aa35.72■■■■□ 3.31
UBXN1-210ENST00000529640 CECR2Q9BXF3 1484 aa35.67■■■■□ 3.3
UBXN1-210ENST00000529640 SCRIBQ14160 1630 aa35.51■■■■□ 3.28
UBXN1-210ENST00000529640 EIF4G1Q04637 1599 aaKnown RBP35.51■■■■□ 3.27
UBXN1-210ENST00000529640 DNAJC5Q9H3Z4 198 aa34.86■■■■□ 3.17
UBXN1-210ENST00000529640 CUX2O14529 1486 aa34.33■■■■□ 3.09
UBXN1-210ENST00000529640 NCAPD3P42695 1498 aa34.18■■■■□ 3.06
UBXN1-210ENST00000529640 ERCC6Q03468 1493 aa34.15■■■■□ 3.06
UBXN1-210ENST00000529640 ATAD2BQ9ULI0 1458 aa34■■■■□ 3.03
UBXN1-210ENST00000529640 HMGXB3Q12766 1538 aa33.93■■■■□ 3.02
UBXN1-210ENST00000529640 SMARCA2P51531 1590 aa33.9■■■■□ 3.02
UBXN1-210ENST00000529640 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
UBXN1-210ENST00000529640 NESP48681 1621 aa33.79■■■■□ 3
UBXN1-210ENST00000529640 THOC2Q8NI27 1593 aaKnown RBP33.64■■■□□ 2.98
UBXN1-210ENST00000529640 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
UBXN1-210ENST00000529640 BAZ1AQ9NRL2 1556 aaPredicted RBP33.6■■■□□ 2.97
UBXN1-210ENST00000529640 PEG3Q9GZU2 1588 aa33.56■■■□□ 2.96
UBXN1-210ENST00000529640 LAMC3Q9Y6N6 1575 aa33.53■■■□□ 2.96
UBXN1-210ENST00000529640 KIF21AQ7Z4S6 1674 aa33.41■■■□□ 2.94
UBXN1-210ENST00000529640 PDS5BQ9NTI5 1447 aa33.3■■■□□ 2.92
UBXN1-210ENST00000529640 MROH2BQ7Z745 1585 aa33.28■■■□□ 2.92
UBXN1-210ENST00000529640 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
UBXN1-210ENST00000529640 MRC2Q9UBG0 1479 aa33.07■■■□□ 2.88
UBXN1-210ENST00000529640 TRIM41Q8WV44 630 aa33.05■■■□□ 2.88
UBXN1-210ENST00000529640 WDR62O43379 1518 aa33.04■■■□□ 2.88
UBXN1-210ENST00000529640 WIZO95785 1651 aa32.87■■■□□ 2.85
UBXN1-210ENST00000529640 CEP164Q9UPV0 1460 aa32.83■■■□□ 2.85
UBXN1-210ENST00000529640 FANCD2Q9BXW9 1451 aa32.74■■■□□ 2.83
UBXN1-210ENST00000529640 CFTRP13569 1480 aa32.62■■■□□ 2.81
UBXN1-210ENST00000529640 OSCARQ8IYS5 282 aa32.58■■■□□ 2.81
UBXN1-210ENST00000529640 URB2Q14146 1524 aaKnown RBP32.51■■■□□ 2.79
UBXN1-210ENST00000529640 TOP2AP11388 1531 aaKnown RBP32.43■■■□□ 2.78
UBXN1-210ENST00000529640 RSF1Q96T23 1441 aaPredicted RBP32.37■■■□□ 2.77
UBXN1-210ENST00000529640 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
UBXN1-210ENST00000529640 RIMBP3CA6NJZ7 1639 aa32.31■■■□□ 2.76
UBXN1-210ENST00000529640 RIMBP3BA6NNM3 1639 aa32.31■■■□□ 2.76
UBXN1-210ENST00000529640 RIMBP3Q9UFD9 1639 aa32.31■■■□□ 2.76
UBXN1-210ENST00000529640 IFT140Q96RY7 1462 aa32.19■■■□□ 2.74
UBXN1-210ENST00000529640 ZNF608Q9ULD9 1512 aaPredicted RBP32.17■■■□□ 2.74
UBXN1-210ENST00000529640 ARHGEF11O15085 1522 aa32.14■■■□□ 2.74
UBXN1-210ENST00000529640 TOPBP1Q92547 1522 aa32.06■■■□□ 2.72
UBXN1-210ENST00000529640 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
UBXN1-210ENST00000529640 EIF4G3O43432 1585 aaKnown RBP32.02■■■□□ 2.72
UBXN1-210ENST00000529640 ABCC8Q09428 1581 aa31.97■■■□□ 2.71
UBXN1-210ENST00000529640 DNMBPQ6XZF7 1577 aa31.92■■■□□ 2.7
UBXN1-210ENST00000529640 CHD1O14646 1710 aa31.91■■■□□ 2.7
UBXN1-210ENST00000529640 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
UBXN1-210ENST00000529640 CYB5RLQ6IPT4 315 aa31.83■■■□□ 2.69
UBXN1-210ENST00000529640 AQRO60306 1485 aaKnown RBP eCLIP31.78■■■□□ 2.688e-8■■■■□ 24
UBXN1-210ENST00000529640 ARAP1Q96P48 1450 aa31.78■■■□□ 2.68
UBXN1-210ENST00000529640 POLA1P09884 1462 aaPredicted RBP31.7■■■□□ 2.66
UBXN1-210ENST00000529640 TRHP20396 242 aaPredicted RBP31.64■■■□□ 2.66
UBXN1-210ENST00000529640 FBLN2P98095 1184 aa31.62■■■□□ 2.65
UBXN1-210ENST00000529640 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
UBXN1-210ENST00000529640 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
UBXN1-210ENST00000529640 CLASP1Q7Z460 1538 aa31.51■■■□□ 2.63
UBXN1-210ENST00000529640 SOGA1O94964 1423 aa31.49■■■□□ 2.63
UBXN1-210ENST00000529640 TDRD9Q8NDG6 1382 aaKnown RBP31.49■■■□□ 2.63
UBXN1-210ENST00000529640 SNAPC4Q5SXM2 1469 aa31.48■■■□□ 2.63
UBXN1-210ENST00000529640 SYNJ1O43426 1573 aa31.43■■■□□ 2.62
UBXN1-210ENST00000529640 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
UBXN1-210ENST00000529640 MAGI1Q96QZ7 1491 aaPredicted RBP31.4■■■□□ 2.62
UBXN1-210ENST00000529640 CHMP7Q8WUX9 453 aaPredicted RBP31.33■■■□□ 2.61
UBXN1-210ENST00000529640 GRIN2BQ13224 1484 aa31.33■■■□□ 2.61
UBXN1-210ENST00000529640 CUX1P39880 1505 aa31.31■■■□□ 2.6
UBXN1-210ENST00000529640 SYNJ2O15056 1496 aa31.29■■■□□ 2.6
UBXN1-210ENST00000529640 PBRM1Q86U86 1689 aa31.23■■■□□ 2.59
UBXN1-210ENST00000529640 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
UBXN1-210ENST00000529640 AEBP2Q6ZN18 517 aaPredicted RBP31.13■■■□□ 2.57
UBXN1-210ENST00000529640 ABCA5Q8WWZ7 1642 aa31.09■■■□□ 2.57
UBXN1-210ENST00000529640 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
UBXN1-210ENST00000529640 ERCC6L2Q5T890 1561 aa30.94■■■□□ 2.54
UBXN1-210ENST00000529640 GRIN2AQ12879 1464 aa30.94■■■□□ 2.54
UBXN1-210ENST00000529640 ADAMTS12P58397 1594 aa30.88■■■□□ 2.53
UBXN1-210ENST00000529640 CEP170Q5SW79 1584 aa30.88■■■□□ 2.53
UBXN1-210ENST00000529640 NUP160Q12769 1436 aa30.86■■■□□ 2.53
UBXN1-210ENST00000529640 SHROOM2Q13796 1616 aa30.83■■■□□ 2.53
UBXN1-210ENST00000529640 WRNQ14191 1432 aaPredicted RBP eCLIP30.78■■■□□ 2.52
UBXN1-210ENST00000529640 KIF13AQ9H1H9 1805 aa30.73■■■□□ 2.51
UBXN1-210ENST00000529640 FHAD1B1AJZ9 1412 aa30.73■■■□□ 2.51
UBXN1-210ENST00000529640 BIVM-ERCC5R4GMW8 1640 aa30.72■■■□□ 2.51
UBXN1-210ENST00000529640 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
UBXN1-210ENST00000529640 ERICH3Q5RHP9 1530 aa30.66■■■□□ 2.5
UBXN1-210ENST00000529640 PRG4Q92954 1404 aaPredicted RBP30.56■■■□□ 2.48
UBXN1-210ENST00000529640 RUSC2Q8N2Y8 1516 aa30.47■■■□□ 2.47
UBXN1-210ENST00000529640 JPH4Q96JJ6 628 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms