RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 KTN1Q86UP2 1357 aaKnown RBP31.65■■■□□ 2.66
LTBP3-212ENST00000529189 PLEKHH1Q9ULM0 1364 aa31.65■■■□□ 2.66
LTBP3-212ENST00000529189 CDCA8Q53HL2 280 aa31.63■■■□□ 2.65
LTBP3-212ENST00000529189 WAPLQ7Z5K2 1190 aa31.63■■■□□ 2.65
LTBP3-212ENST00000529189 PIK3R4Q99570 1358 aa31.63■■■□□ 2.65
LTBP3-212ENST00000529189 XRN1Q8IZH2 1706 aaKnown RBP31.63■■■□□ 2.65
LTBP3-212ENST00000529189 ROBO2Q9HCK4 1378 aa31.63■■■□□ 2.65
LTBP3-212ENST00000529189 AMOTL2Q9Y2J4 779 aa31.62■■■□□ 2.65
LTBP3-212ENST00000529189 FAM135BQ49AJ0 1406 aa31.61■■■□□ 2.65
LTBP3-212ENST00000529189 SLC24A1O60721 1099 aa31.61■■■□□ 2.65
LTBP3-212ENST00000529189 MYT1Q01538 1121 aa31.6■■■□□ 2.65
LTBP3-212ENST00000529189 TULP4Q9NRJ4 1543 aa31.6■■■□□ 2.65
LTBP3-212ENST00000529189 MINK1Q8N4C8 1332 aaPredicted RBP31.59■■■□□ 2.65
LTBP3-212ENST00000529189 CNGB1Q14028 1251 aaPredicted RBP31.59■■■□□ 2.65
LTBP3-212ENST00000529189 SIRT1Q96EB6 747 aa31.58■■■□□ 2.65
LTBP3-212ENST00000529189 CHD2O14647 1828 aaKnown RBP31.58■■■□□ 2.65
LTBP3-212ENST00000529189 STRCQ7RTU9 1775 aa31.58■■■□□ 2.65
LTBP3-212ENST00000529189 RALBP1Q15311 655 aa31.57■■■□□ 2.64
LTBP3-212ENST00000529189 PTCH1Q13635 1447 aa31.57■■■□□ 2.64
LTBP3-212ENST00000529189 PER1O15534 1290 aaPredicted RBP31.55■■■□□ 2.64
LTBP3-212ENST00000529189 HNRNPUQ00839 825 aaKnown RBP eCLIP31.54■■■□□ 2.64
LTBP3-212ENST00000529189 PANK3Q9H999 370 aa31.54■■■□□ 2.64
LTBP3-212ENST00000529189 MYOM1P52179 1685 aa31.53■■■□□ 2.64
LTBP3-212ENST00000529189 EVC2Q86UK5 1308 aa31.53■■■□□ 2.64
LTBP3-212ENST00000529189 KCNA6P17658 529 aa31.53■■■□□ 2.64
LTBP3-212ENST00000529189 FAM9BQ8IZU0 186 aa31.51■■■□□ 2.63
LTBP3-212ENST00000529189 MYBBP1AQ9BQG0 1328 aaKnown RBP31.51■■■□□ 2.63
LTBP3-212ENST00000529189 PARD3Q8TEW0 1356 aa31.49■■■□□ 2.63
LTBP3-212ENST00000529189 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.48■■■□□ 2.63
LTBP3-212ENST00000529189 NWD1Q149M9 1564 aa31.48■■■□□ 2.63
LTBP3-212ENST00000529189 BRD4O60885 1362 aaPredicted RBP31.45■■■□□ 2.63
LTBP3-212ENST00000529189 CABP2Q9NPB3 220 aa31.45■■■□□ 2.62
LTBP3-212ENST00000529189 ADGRB2O60241 1585 aa31.43■■■□□ 2.62
LTBP3-212ENST00000529189 SRPK2P78362 688 aaKnown RBP31.43■■■□□ 2.62
LTBP3-212ENST00000529189 CDK19Q9BWU1 502 aa31.42■■■□□ 2.62
LTBP3-212ENST00000529189 TMC1Q8TDI8 760 aa31.41■■■□□ 2.62
LTBP3-212ENST00000529189 PUS7Q96PZ0 661 aaKnown RBP31.39■■■□□ 2.62
LTBP3-212ENST00000529189 WASLO00401 505 aaPredicted RBP31.38■■■□□ 2.61
LTBP3-212ENST00000529189 STRCP1A6NGW2 1772 aa31.37■■■□□ 2.61
LTBP3-212ENST00000529189 CC2D1BQ5T0F9 858 aaKnown RBP31.36■■■□□ 2.61
LTBP3-212ENST00000529189 NLRP13Q86W25 1043 aa31.36■■■□□ 2.61
LTBP3-212ENST00000529189 KNSTRNQ9Y448 316 aa31.36■■■□□ 2.61
LTBP3-212ENST00000529189 NKTRP30414 1462 aaKnown RBP31.35■■■□□ 2.61
LTBP3-212ENST00000529189 ATAD2Q6PL18 1390 aa31.34■■■□□ 2.61
LTBP3-212ENST00000529189 RBM33Q96EV2 1170 aaKnown RBP31.34■■■□□ 2.61
LTBP3-212ENST00000529189 NALCNQ8IZF0 1738 aa31.34■■■□□ 2.61
LTBP3-212ENST00000529189 PNISRQ8TF01 805 aaKnown RBP31.34■■■□□ 2.61
LTBP3-212ENST00000529189 SLC12A5Q9H2X9 1139 aa31.31■■■□□ 2.6
LTBP3-212ENST00000529189 ZBED9Q6R2W3 1325 aa31.31■■■□□ 2.6
LTBP3-212ENST00000529189 NPC1L1Q9UHC9 1359 aa31.27■■■□□ 2.6
LTBP3-212ENST00000529189 ATP7BP35670 1465 aa31.27■■■□□ 2.6
LTBP3-212ENST00000529189 ADGRL3Q9HAR2 1447 aa31.27■■■□□ 2.6
LTBP3-212ENST00000529189 NINLQ9Y2I6 1382 aa31.27■■■□□ 2.6
LTBP3-212ENST00000529189 AMER1Q5JTC6 1135 aaPredicted RBP31.26■■■□□ 2.6
LTBP3-212ENST00000529189 PROSER2Q86WR7 435 aaPredicted RBP31.26■■■□□ 2.6
LTBP3-212ENST00000529189 CDC42BPGQ6DT37 1551 aa31.25■■■□□ 2.59
LTBP3-212ENST00000529189 PRR36Q9H6K5 1346 aa31.24■■■□□ 2.59
LTBP3-212ENST00000529189 NUDT16Q96DE0 195 aaKnown RBP31.24■■■□□ 2.59
LTBP3-212ENST00000529189 DMRT2Q9Y5R5 561 aa31.24■■■□□ 2.59
LTBP3-212ENST00000529189 ZNF335Q9H4Z2 1342 aaPredicted RBP31.23■■■□□ 2.59
LTBP3-212ENST00000529189 NUTM2FA1L443 756 aa31.23■■■□□ 2.59
LTBP3-212ENST00000529189 FMN2Q9NZ56 1722 aa31.22■■■□□ 2.59
LTBP3-212ENST00000529189 C14orf37Q86TY3 774 aa31.22■■■□□ 2.59
LTBP3-212ENST00000529189 USP32Q8NFA0 1604 aa31.22■■■□□ 2.59
LTBP3-212ENST00000529189 CABP1Q9NZU7 370 aa31.21■■■□□ 2.59
LTBP3-212ENST00000529189 PPIP5K1Q6PFW1 1433 aa31.21■■■□□ 2.59
LTBP3-212ENST00000529189 ANKRD36BQ8N2N9 1353 aa31.21■■■□□ 2.59
LTBP3-212ENST00000529189 TOPAZ1Q8N9V7 1692 aa31.2■■■□□ 2.59
LTBP3-212ENST00000529189 SUPT16HQ9Y5B9 1047 aaKnown RBP31.2■■■□□ 2.59
LTBP3-212ENST00000529189 TMEM94Q12767 1356 aa31.19■■■□□ 2.58
LTBP3-212ENST00000529189 CARD14Q9BXL6 1004 aa31.19■■■□□ 2.58
LTBP3-212ENST00000529189 CD163L1Q9NR16 1453 aa31.19■■■□□ 2.58
LTBP3-212ENST00000529189 A0A1W2PP64 1363 aa31.18■■■□□ 2.58
LTBP3-212ENST00000529189 CCDC61Q9Y6R9 512 aa31.17■■■□□ 2.58
LTBP3-212ENST00000529189 NSD3Q9BZ95 1437 aa31.16■■■□□ 2.58
LTBP3-212ENST00000529189 RGPD8O14715 1765 aaPredicted RBP31.15■■■□□ 2.58
LTBP3-212ENST00000529189 ITSN1Q15811 1721 aa31.14■■■□□ 2.58
LTBP3-212ENST00000529189 ANKARQ7Z5J8 1434 aa31.14■■■□□ 2.58
LTBP3-212ENST00000529189 AEBP2Q6ZN18 517 aaPredicted RBP31.14■■■□□ 2.57
LTBP3-212ENST00000529189 TERF2IPQ9NYB0 399 aa31.14■■■□□ 2.57
LTBP3-212ENST00000529189 PPP2R1AP30153 589 aa31.12■■■□□ 2.57
LTBP3-212ENST00000529189 XIRP1Q702N8 1843 aaKnown RBP31.12■■■□□ 2.57
LTBP3-212ENST00000529189 LRRC7Q96NW7 1537 aa31.12■■■□□ 2.57
LTBP3-212ENST00000529189 NCOA3Q9Y6Q9 1424 aa31.11■■■□□ 2.57
LTBP3-212ENST00000529189 HDGFL2Q7Z4V5 671 aaPredicted RBP31.1■■■□□ 2.57
LTBP3-212ENST00000529189 INSRP06213 1382 aa31.09■■■□□ 2.57
LTBP3-212ENST00000529189 NEFLP07196 543 aa31.09■■■□□ 2.57
LTBP3-212ENST00000529189 C19orf44Q9H6X5 657 aa31.08■■■□□ 2.57
LTBP3-212ENST00000529189 CPSF1Q10570 1443 aaKnown RBP31.08■■■□□ 2.57
LTBP3-212ENST00000529189 AKAP12Q02952 1782 aa31.07■■■□□ 2.56
LTBP3-212ENST00000529189 PLEKHG3A1L390 1219 aa31.05■■■□□ 2.56
LTBP3-212ENST00000529189 MON2Q7Z3U7 1717 aa31.04■■■□□ 2.56
LTBP3-212ENST00000529189 DCCP43146 1447 aa31.03■■■□□ 2.56
LTBP3-212ENST00000529189 FKBP8Q14318 412 aa31.03■■■□□ 2.56
LTBP3-212ENST00000529189 PMFBP1Q8TBY8 1022 aa31.02■■■□□ 2.56
LTBP3-212ENST00000529189 ACEP12821 1306 aa31.02■■■□□ 2.56
LTBP3-212ENST00000529189 MSH6P52701 1360 aa31.01■■■□□ 2.56
LTBP3-212ENST00000529189 BLMP54132 1417 aaPredicted RBP31.01■■■□□ 2.56
LTBP3-212ENST00000529189 CGNL1Q0VF96 1302 aa31.01■■■□□ 2.55
LTBP3-212ENST00000529189 ATF3P18847 181 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms