RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
SRPRA-203ENST00000528744 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
SRPRA-203ENST00000528744 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
SRPRA-203ENST00000528744 PPLO60437 1756 aa17.16■□□□□ 0.34
SRPRA-203ENST00000528744 AFF2P51816 1311 aa17.16■□□□□ 0.34
SRPRA-203ENST00000528744 ESCO1Q5FWF5 840 aa17.15■□□□□ 0.34
SRPRA-203ENST00000528744 PIK3C2GO75747 1445 aa17.14■□□□□ 0.33
SRPRA-203ENST00000528744 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
SRPRA-203ENST00000528744 XPCQ01831 940 aaPredicted RBP17.14■□□□□ 0.33
SRPRA-203ENST00000528744 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
SRPRA-203ENST00000528744 NHSL1Q5SYE7 1610 aa17.14■□□□□ 0.33
SRPRA-203ENST00000528744 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
SRPRA-203ENST00000528744 FOXO3O43524 673 aa17.13■□□□□ 0.33
SRPRA-203ENST00000528744 TECPR2O15040 1411 aa17.13■□□□□ 0.33
SRPRA-203ENST00000528744 RXRBP28702 533 aa17.12■□□□□ 0.33
SRPRA-203ENST00000528744 QTRT2Q9H974 415 aaKnown RBP17.11■□□□□ 0.33
SRPRA-203ENST00000528744 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.33
SRPRA-203ENST00000528744 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
SRPRA-203ENST00000528744 YTHDC2Q9H6S0 1430 aaKnown RBP17.1■□□□□ 0.33
SRPRA-203ENST00000528744 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.32
SRPRA-203ENST00000528744 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
SRPRA-203ENST00000528744 NGLY1Q96IV0 654 aa17.08■□□□□ 0.32
SRPRA-203ENST00000528744 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
SRPRA-203ENST00000528744 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
SRPRA-203ENST00000528744 NPHP3Q7Z494 1330 aa17.05■□□□□ 0.32
SRPRA-203ENST00000528744 ACIN1Q9UKV3 1341 aaKnown RBP17.05■□□□□ 0.32
SRPRA-203ENST00000528744 FNBP4Q8N3X1 1017 aaPredicted RBP17.05■□□□□ 0.32
SRPRA-203ENST00000528744 LAMC1P11047 1609 aa17.05■□□□□ 0.32
SRPRA-203ENST00000528744 PXDNQ92626 1479 aa17.05■□□□□ 0.32
SRPRA-203ENST00000528744 IFT172Q9UG01 1749 aa17.04■□□□□ 0.32
SRPRA-203ENST00000528744 HRCP23327 699 aa17.04■□□□□ 0.32
SRPRA-203ENST00000528744 RBM6P78332 1123 aaKnown RBP17.04■□□□□ 0.32
SRPRA-203ENST00000528744 DHX57Q6P158 1386 aaKnown RBP17.03■□□□□ 0.32
SRPRA-203ENST00000528744 KRT28Q7Z3Y7 464 aa17.03■□□□□ 0.32
SRPRA-203ENST00000528744 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
SRPRA-203ENST00000528744 USP21Q9UK80 565 aa17.03■□□□□ 0.32
SRPRA-203ENST00000528744 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.32
SRPRA-203ENST00000528744 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.32
SRPRA-203ENST00000528744 MYOM2P54296 1465 aa17.01■□□□□ 0.31
SRPRA-203ENST00000528744 SPATA31A3Q5VYP0 1347 aa17■□□□□ 0.31
SRPRA-203ENST00000528744 PHF8Q9UPP1 1060 aa17■□□□□ 0.31
SRPRA-203ENST00000528744 RGS12O14924 1447 aa16.99■□□□□ 0.31
SRPRA-203ENST00000528744 HIRIP3Q9BW71 556 aaPredicted RBP16.99■□□□□ 0.31
SRPRA-203ENST00000528744 PMFBP1Q8TBY8 1022 aa16.98■□□□□ 0.31
SRPRA-203ENST00000528744 CABLES1Q8TDN4 633 aa16.98■□□□□ 0.31
SRPRA-203ENST00000528744 POGKQ9P215 609 aa16.98■□□□□ 0.31
SRPRA-203ENST00000528744 TRPC5Q9UL62 973 aaPredicted RBP16.97■□□□□ 0.31
SRPRA-203ENST00000528744 BCL9LQ86UU0 1499 aa16.97■□□□□ 0.31
SRPRA-203ENST00000528744 CDK12Q9NYV4 1490 aaPredicted RBP16.97■□□□□ 0.31
SRPRA-203ENST00000528744 PRR36Q9H6K5 1346 aa16.96■□□□□ 0.31
SRPRA-203ENST00000528744 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
SRPRA-203ENST00000528744 ADGRB1O14514 1584 aa16.96■□□□□ 0.31
SRPRA-203ENST00000528744 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.3
SRPRA-203ENST00000528744 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
SRPRA-203ENST00000528744 ATRNO75882 1429 aa16.95■□□□□ 0.3
SRPRA-203ENST00000528744 COL22A1Q8NFW1 1626 aaPredicted RBP16.92■□□□□ 0.3
SRPRA-203ENST00000528744 PSME1Q06323 249 aa16.92■□□□□ 0.3
SRPRA-203ENST00000528744 FMN2Q9NZ56 1722 aa16.92■□□□□ 0.3
SRPRA-203ENST00000528744 WASLO00401 505 aaPredicted RBP16.91■□□□□ 0.3
SRPRA-203ENST00000528744 NBPF1Q3BBV0 1214 aa16.91■□□□□ 0.3
SRPRA-203ENST00000528744 GJD4Q96KN9 370 aaPredicted RBP16.91■□□□□ 0.3
SRPRA-203ENST00000528744 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
SRPRA-203ENST00000528744 LMOD2Q6P5Q4 547 aa16.89■□□□□ 0.29
SRPRA-203ENST00000528744 UNC5CLQ8IV45 518 aa16.89■□□□□ 0.29
SRPRA-203ENST00000528744 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
SRPRA-203ENST00000528744 FAM83GA6ND36 823 aa16.88■□□□□ 0.29
SRPRA-203ENST00000528744 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
SRPRA-203ENST00000528744 SLIT2O94813 1529 aa16.87■□□□□ 0.29
SRPRA-203ENST00000528744 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
SRPRA-203ENST00000528744 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
SRPRA-203ENST00000528744 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
SRPRA-203ENST00000528744 ANKARQ7Z5J8 1434 aa16.85■□□□□ 0.29
SRPRA-203ENST00000528744 NUDT16Q96DE0 195 aaKnown RBP16.84■□□□□ 0.29
SRPRA-203ENST00000528744 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
SRPRA-203ENST00000528744 CDK19Q9BWU1 502 aa16.84■□□□□ 0.29
SRPRA-203ENST00000528744 RALGAPBQ86X10 1494 aa16.82■□□□□ 0.28
SRPRA-203ENST00000528744 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
SRPRA-203ENST00000528744 VPS72Q15906 364 aa16.81■□□□□ 0.28
SRPRA-203ENST00000528744 NGDNQ8NEJ9 315 aaKnown RBP16.81■□□□□ 0.28
SRPRA-203ENST00000528744 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
SRPRA-203ENST00000528744 ONECUT3O60422 494 aaPredicted RBP16.8■□□□□ 0.28
SRPRA-203ENST00000528744 L3MBTL2Q969R5 705 aa16.8■□□□□ 0.28
SRPRA-203ENST00000528744 EP400Q96L91 3159 aa16.8■□□□□ 0.28
SRPRA-203ENST00000528744 ADGRB2O60241 1585 aa16.8■□□□□ 0.28
SRPRA-203ENST00000528744 SRCAPQ6ZRS2 3230 aa16.79■□□□□ 0.28
SRPRA-203ENST00000528744 ARHGEF10O15013 1369 aa16.79■□□□□ 0.28
SRPRA-203ENST00000528744 ATAD2Q6PL18 1390 aa16.79■□□□□ 0.28
SRPRA-203ENST00000528744 SEPT12Q8IYM1 358 aa16.79■□□□□ 0.28
SRPRA-203ENST00000528744 GLI3P10071 1580 aa16.79■□□□□ 0.28
SRPRA-203ENST00000528744 PAK3O75914 559 aaPredicted RBP16.78■□□□□ 0.28
SRPRA-203ENST00000528744 TULP4Q9NRJ4 1543 aa16.78■□□□□ 0.28
SRPRA-203ENST00000528744 GPRASP1Q5JY77 1395 aa16.77■□□□□ 0.28
SRPRA-203ENST00000528744 NBPF8Q3BBV2 869 aa16.77■□□□□ 0.28
SRPRA-203ENST00000528744 NUTM2GQ5VZR2 741 aa16.77■□□□□ 0.28
SRPRA-203ENST00000528744 BTG4Q9NY30 223 aa16.77■□□□□ 0.28
SRPRA-203ENST00000528744 ATP7BP35670 1465 aa16.76■□□□□ 0.27
SRPRA-203ENST00000528744 ACEP12821 1306 aa16.75■□□□□ 0.27
SRPRA-203ENST00000528744 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
SRPRA-203ENST00000528744 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
SRPRA-203ENST00000528744 CCDC9Q9Y3X0 531 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms