RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 TRPM2O94759 1503 aa10.62□□□□□ -0.71
PTP4A2-210ENST00000528253 CLTCL1P53675 1640 aa10.62□□□□□ -0.71
PTP4A2-210ENST00000528253 ZFYVE9O95405 1425 aa10.61□□□□□ -0.71
PTP4A2-210ENST00000528253 UBAP1LF5GYI3 381 aa10.61□□□□□ -0.71
PTP4A2-210ENST00000528253 NUTM2DQ5VT03 806 aaPredicted RBP10.61□□□□□ -0.71
PTP4A2-210ENST00000528253 PLEKHG1Q9ULL1 1385 aa10.61□□□□□ -0.71
PTP4A2-210ENST00000528253 TOM1O60784 492 aa10.6□□□□□ -0.71
PTP4A2-210ENST00000528253 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
PTP4A2-210ENST00000528253 CHD2O14647 1828 aaKnown RBP10.6□□□□□ -0.71
PTP4A2-210ENST00000528253 KCNA6P17658 529 aa10.59□□□□□ -0.71
PTP4A2-210ENST00000528253 LCE2DQ5TA82 110 aaPredicted RBP10.59□□□□□ -0.71
PTP4A2-210ENST00000528253 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
PTP4A2-210ENST00000528253 HRCP23327 699 aa10.58□□□□□ -0.72
PTP4A2-210ENST00000528253 NUBP1P53384 320 aa10.58□□□□□ -0.72
PTP4A2-210ENST00000528253 FAM212AQ96EL1 285 aa10.58□□□□□ -0.72
PTP4A2-210ENST00000528253 TBX22Q9Y458 520 aa10.58□□□□□ -0.72
PTP4A2-210ENST00000528253 XIRP1Q702N8 1843 aaKnown RBP10.57□□□□□ -0.72
PTP4A2-210ENST00000528253 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
PTP4A2-210ENST00000528253 LRRC7Q96NW7 1537 aa10.57□□□□□ -0.72
PTP4A2-210ENST00000528253 RPGRIP1LQ68CZ1 1315 aa10.57□□□□□ -0.72
PTP4A2-210ENST00000528253 VGFO15240 615 aaPredicted RBP10.56□□□□□ -0.72
PTP4A2-210ENST00000528253 DCAF8Q5TAQ9 597 aa10.56□□□□□ -0.72
PTP4A2-210ENST00000528253 PROSER2Q86WR7 435 aaPredicted RBP10.56□□□□□ -0.72
PTP4A2-210ENST00000528253 CCDC144AA2RUR9 1427 aa10.56□□□□□ -0.72
PTP4A2-210ENST00000528253 PPLO60437 1756 aa10.55□□□□□ -0.72
PTP4A2-210ENST00000528253 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
PTP4A2-210ENST00000528253 ZNF579Q8NAF0 562 aaKnown RBP10.55□□□□□ -0.72
PTP4A2-210ENST00000528253 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
PTP4A2-210ENST00000528253 DIP2AQ14689 1571 aa10.55□□□□□ -0.72
PTP4A2-210ENST00000528253 GALR2O43603 387 aaPredicted RBP10.54□□□□□ -0.72
PTP4A2-210ENST00000528253 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
PTP4A2-210ENST00000528253 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
PTP4A2-210ENST00000528253 PIK3R4Q99570 1358 aa10.53□□□□□ -0.72
PTP4A2-210ENST00000528253 NWD1Q149M9 1564 aa10.53□□□□□ -0.72
PTP4A2-210ENST00000528253 ADAMTS13Q76LX8 1427 aa10.53□□□□□ -0.72
PTP4A2-210ENST00000528253 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.73
PTP4A2-210ENST00000528253 AMOTL2Q9Y2J4 779 aa10.52□□□□□ -0.73
PTP4A2-210ENST00000528253 NKTRP30414 1462 aaKnown RBP10.52□□□□□ -0.73
PTP4A2-210ENST00000528253 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.73
PTP4A2-210ENST00000528253 TMEM94Q12767 1356 aa10.52□□□□□ -0.73
PTP4A2-210ENST00000528253 NRXN3Q9Y4C0 1643 aa10.51□□□□□ -0.73
PTP4A2-210ENST00000528253 PAXIP1Q6ZW49 1069 aaPredicted RBP10.51□□□□□ -0.73
PTP4A2-210ENST00000528253 C14orf37Q86TY3 774 aa10.51□□□□□ -0.73
PTP4A2-210ENST00000528253 RBM33Q96EV2 1170 aaKnown RBP10.51□□□□□ -0.73
PTP4A2-210ENST00000528253 FAM163AQ96GL9 167 aaPredicted RBP10.51□□□□□ -0.73
PTP4A2-210ENST00000528253 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
PTP4A2-210ENST00000528253 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
PTP4A2-210ENST00000528253 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
PTP4A2-210ENST00000528253 MSH6P52701 1360 aa10.49□□□□□ -0.73
PTP4A2-210ENST00000528253 ANKRD30BQ9BXX2 1392 aa10.49□□□□□ -0.73
PTP4A2-210ENST00000528253 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
PTP4A2-210ENST00000528253 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
PTP4A2-210ENST00000528253 SPATA31E1Q6ZUB1 1445 aa10.48□□□□□ -0.73
PTP4A2-210ENST00000528253 NCOA3Q9Y6Q9 1424 aa10.48□□□□□ -0.73
PTP4A2-210ENST00000528253 ALKQ9UM73 1620 aa10.47□□□□□ -0.73
PTP4A2-210ENST00000528253 RIOK3O14730 519 aaKnown RBP10.47□□□□□ -0.73
PTP4A2-210ENST00000528253 HS6ST3Q8IZP7 471 aa10.47□□□□□ -0.73
PTP4A2-210ENST00000528253 METP08581 1390 aa10.47□□□□□ -0.73
PTP4A2-210ENST00000528253 PTPRUQ92729 1446 aa10.47□□□□□ -0.73
PTP4A2-210ENST00000528253 ATF3P18847 181 aa10.46□□□□□ -0.73
PTP4A2-210ENST00000528253 C19orf44Q9H6X5 657 aa10.46□□□□□ -0.73
PTP4A2-210ENST00000528253 SETD1AO15047 1707 aaKnown RBP10.46□□□□□ -0.74
PTP4A2-210ENST00000528253 XRN1Q8IZH2 1706 aaKnown RBP10.46□□□□□ -0.74
PTP4A2-210ENST00000528253 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.46□□□□□ -0.74
PTP4A2-210ENST00000528253 ADGRF5Q8IZF2 1346 aa10.45□□□□□ -0.74
PTP4A2-210ENST00000528253 HSPA1LP34931 641 aa10.45□□□□□ -0.74
PTP4A2-210ENST00000528253 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
PTP4A2-210ENST00000528253 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
PTP4A2-210ENST00000528253 SLAIN2Q9P270 581 aa10.45□□□□□ -0.74
PTP4A2-210ENST00000528253 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
PTP4A2-210ENST00000528253 RASEFQ8IZ41 740 aa10.44□□□□□ -0.74
PTP4A2-210ENST00000528253 RNF25Q96BH1 459 aaPredicted RBP10.44□□□□□ -0.74
PTP4A2-210ENST00000528253 FAM135BQ49AJ0 1406 aa10.43□□□□□ -0.74
PTP4A2-210ENST00000528253 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
PTP4A2-210ENST00000528253 ROBO1Q9Y6N7 1651 aa10.43□□□□□ -0.74
PTP4A2-210ENST00000528253 POTEJP0CG39 1038 aa10.42□□□□□ -0.74
PTP4A2-210ENST00000528253 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
PTP4A2-210ENST00000528253 DCAF11Q8TEB1 546 aa10.42□□□□□ -0.74
PTP4A2-210ENST00000528253 KDM2AQ9Y2K7 1162 aa10.42□□□□□ -0.74
PTP4A2-210ENST00000528253 STK26Q9P289 416 aa10.41□□□□□ -0.74
PTP4A2-210ENST00000528253 PIK3C2GO75747 1445 aa10.41□□□□□ -0.74
PTP4A2-210ENST00000528253 LAMC1P11047 1609 aa10.4□□□□□ -0.74
PTP4A2-210ENST00000528253 TMEM132EQ6IEE7 984 aa10.4□□□□□ -0.74
PTP4A2-210ENST00000528253 C14orf93Q9H972 538 aaKnown RBP10.4□□□□□ -0.74
PTP4A2-210ENST00000528253 MYOM2P54296 1465 aa10.4□□□□□ -0.74
PTP4A2-210ENST00000528253 PHLPP1O60346 1717 aa10.39□□□□□ -0.75
PTP4A2-210ENST00000528253 NALCNQ8IZF0 1738 aa10.39□□□□□ -0.75
PTP4A2-210ENST00000528253 DCCP43146 1447 aa10.39□□□□□ -0.75
PTP4A2-210ENST00000528253 PTCH1Q13635 1447 aa10.39□□□□□ -0.75
PTP4A2-210ENST00000528253 DHX57Q6P158 1386 aaKnown RBP10.39□□□□□ -0.75
PTP4A2-210ENST00000528253 ROBO2Q9HCK4 1378 aa10.39□□□□□ -0.75
PTP4A2-210ENST00000528253 NRXN1Q9ULB1 1477 aa10.38□□□□□ -0.75
PTP4A2-210ENST00000528253 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
PTP4A2-210ENST00000528253 CDAN1Q8IWY9 1227 aa10.38□□□□□ -0.75
PTP4A2-210ENST00000528253 ADGRL3Q9HAR2 1447 aa10.38□□□□□ -0.75
PTP4A2-210ENST00000528253 KNDC1Q76NI1 1749 aa10.38□□□□□ -0.75
PTP4A2-210ENST00000528253 LRPPRCP42704 1394 aaKnown RBP10.38□□□□□ -0.75
PTP4A2-210ENST00000528253 ABCC11Q96J66 1382 aa10.38□□□□□ -0.75
PTP4A2-210ENST00000528253 DISP3Q9P2K9 1392 aa10.38□□□□□ -0.75
PTP4A2-210ENST00000528253 YTHDC2Q9H6S0 1430 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms