RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 C1orf167Q5SNV9 1468 aa11.56□□□□□ -0.56
VPS26B-204ENST00000527586 ADGRB3O60242 1522 aa11.55□□□□□ -0.56
VPS26B-204ENST00000527586 PARD3Q8TEW0 1356 aa11.55□□□□□ -0.56
VPS26B-204ENST00000527586 CHD4Q14839 1912 aa11.55□□□□□ -0.56
VPS26B-204ENST00000527586 ADGRL3Q9HAR2 1447 aa11.55□□□□□ -0.56
VPS26B-204ENST00000527586 SYT17Q9BSW7 474 aa11.55□□□□□ -0.56
VPS26B-204ENST00000527586 TRIM37O94972 964 aa11.54□□□□□ -0.56
VPS26B-204ENST00000527586 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
VPS26B-204ENST00000527586 TRPM2O94759 1503 aa11.54□□□□□ -0.56
VPS26B-204ENST00000527586 FHDC1Q9C0D6 1143 aaPredicted RBP11.53□□□□□ -0.56
VPS26B-204ENST00000527586 RPRD2Q5VT52 1461 aaKnown RBP11.52□□□□□ -0.56
VPS26B-204ENST00000527586 EHBP1L1Q8N3D4 1523 aa11.52□□□□□ -0.57
VPS26B-204ENST00000527586 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
VPS26B-204ENST00000527586 SLC52A1Q9NWF4 448 aa11.52□□□□□ -0.57
VPS26B-204ENST00000527586 LAMC1P11047 1609 aa11.52□□□□□ -0.57
VPS26B-204ENST00000527586 NRKQ7Z2Y5 1582 aa11.51□□□□□ -0.57
VPS26B-204ENST00000527586 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS26B-204ENST00000527586 MARF1Q9Y4F3 1742 aaKnown RBP11.51□□□□□ -0.57
VPS26B-204ENST00000527586 NOS1P29475 1434 aa11.51□□□□□ -0.57
VPS26B-204ENST00000527586 EIF2AK4Q9P2K8 1649 aaKnown RBP11.49□□□□□ -0.57
VPS26B-204ENST00000527586 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
VPS26B-204ENST00000527586 PTGER2P43116 358 aa11.49□□□□□ -0.57
VPS26B-204ENST00000527586 GPR162Q16538 588 aa11.49□□□□□ -0.57
VPS26B-204ENST00000527586 ADGRB2O60241 1585 aa11.49□□□□□ -0.57
VPS26B-204ENST00000527586 ZBTB7AO95365 584 aa11.48□□□□□ -0.57
VPS26B-204ENST00000527586 XPCQ01831 940 aaPredicted RBP11.48□□□□□ -0.57
VPS26B-204ENST00000527586 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
VPS26B-204ENST00000527586 NPHP3Q7Z494 1330 aa11.46□□□□□ -0.57
VPS26B-204ENST00000527586 SHANK3Q9BYB0 1731 aa11.46□□□□□ -0.58
VPS26B-204ENST00000527586 FAM196AQ6ZSG2 479 aa11.45□□□□□ -0.58
VPS26B-204ENST00000527586 DNAJC5GQ8N7S2 189 aa11.45□□□□□ -0.58
VPS26B-204ENST00000527586 PDGFDQ9GZP0 370 aaPredicted RBP11.45□□□□□ -0.58
VPS26B-204ENST00000527586 EEA1Q15075 1411 aa11.44□□□□□ -0.58
VPS26B-204ENST00000527586 NUP188Q5SRE5 1749 aa11.44□□□□□ -0.58
VPS26B-204ENST00000527586 MYOM1P52179 1685 aa11.44□□□□□ -0.58
VPS26B-204ENST00000527586 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
VPS26B-204ENST00000527586 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
VPS26B-204ENST00000527586 KANK1Q14678 1352 aa11.43□□□□□ -0.58
VPS26B-204ENST00000527586 APLP1P51693 650 aa11.43□□□□□ -0.58
VPS26B-204ENST00000527586 PXDNQ92626 1479 aa11.43□□□□□ -0.58
VPS26B-204ENST00000527586 FYCO1Q9BQS8 1478 aa11.43□□□□□ -0.58
VPS26B-204ENST00000527586 RREB1Q92766 1687 aa11.43□□□□□ -0.58
VPS26B-204ENST00000527586 DLC1Q96QB1 1528 aa11.42□□□□□ -0.58
VPS26B-204ENST00000527586 FOXO3O43524 673 aa11.42□□□□□ -0.58
VPS26B-204ENST00000527586 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
VPS26B-204ENST00000527586 WWC3Q9ULE0 1092 aa11.42□□□□□ -0.58
VPS26B-204ENST00000527586 TMEM131LA2VDJ0 1609 aa11.42□□□□□ -0.58
VPS26B-204ENST00000527586 ESCO1Q5FWF5 840 aa11.41□□□□□ -0.58
VPS26B-204ENST00000527586 ADGRL2O95490 1459 aa11.4□□□□□ -0.58
VPS26B-204ENST00000527586 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
VPS26B-204ENST00000527586 PELP1Q8IZL8 1130 aaKnown RBP11.4□□□□□ -0.58
VPS26B-204ENST00000527586 ATP10DQ9P241 1426 aa11.4□□□□□ -0.58
VPS26B-204ENST00000527586 ARHGEF5Q12774 1597 aa11.4□□□□□ -0.58
VPS26B-204ENST00000527586 XRN1Q8IZH2 1706 aaKnown RBP11.4□□□□□ -0.58
VPS26B-204ENST00000527586 USP32Q8NFA0 1604 aa11.39□□□□□ -0.59
VPS26B-204ENST00000527586 ANO8Q9HCE9 1232 aaPredicted RBP11.39□□□□□ -0.59
VPS26B-204ENST00000527586 DUOX2Q9NRD8 1548 aa11.39□□□□□ -0.59
VPS26B-204ENST00000527586 NALCNQ8IZF0 1738 aa11.38□□□□□ -0.59
VPS26B-204ENST00000527586 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
VPS26B-204ENST00000527586 METP08581 1390 aa11.38□□□□□ -0.59
VPS26B-204ENST00000527586 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
VPS26B-204ENST00000527586 ARXQ96QS3 562 aa11.37□□□□□ -0.59
VPS26B-204ENST00000527586 LMTK2Q8IWU2 1503 aa11.36□□□□□ -0.59
VPS26B-204ENST00000527586 PTPN23Q9H3S7 1636 aa11.36□□□□□ -0.59
VPS26B-204ENST00000527586 ZNF526Q8TF50 670 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-204ENST00000527586 LRPPRCP42704 1394 aaKnown RBP11.36□□□□□ -0.59
VPS26B-204ENST00000527586 CASZ1Q86V15 1759 aa11.36□□□□□ -0.59
VPS26B-204ENST00000527586 CEP162Q5TB80 1403 aa11.35□□□□□ -0.59
VPS26B-204ENST00000527586 MYO5BQ9ULV0 1848 aa11.35□□□□□ -0.59
VPS26B-204ENST00000527586 SGIP1Q9BQI5 828 aa11.35□□□□□ -0.59
VPS26B-204ENST00000527586 BTG4Q9NY30 223 aa11.35□□□□□ -0.59
VPS26B-204ENST00000527586 NWD2Q9ULI1 1742 aa11.35□□□□□ -0.59
VPS26B-204ENST00000527586 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
VPS26B-204ENST00000527586 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
VPS26B-204ENST00000527586 PLCH1Q4KWH8 1693 aa11.34□□□□□ -0.59
VPS26B-204ENST00000527586 MAP3K5Q99683 1374 aa11.34□□□□□ -0.59
VPS26B-204ENST00000527586 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
VPS26B-204ENST00000527586 ERBINQ96RT1 1412 aa11.34□□□□□ -0.59
VPS26B-204ENST00000527586 GCC2Q8IWJ2 1684 aa11.33□□□□□ -0.6
VPS26B-204ENST00000527586 KIF15Q9NS87 1388 aa11.33□□□□□ -0.6
VPS26B-204ENST00000527586 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
VPS26B-204ENST00000527586 RRP7BPQ9NSQ0 103 aa11.33□□□□□ -0.6
VPS26B-204ENST00000527586 AATKQ6ZMQ8 1374 aa11.32□□□□□ -0.6
VPS26B-204ENST00000527586 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
VPS26B-204ENST00000527586 KLRG1Q96E93 195 aa11.31□□□□□ -0.6
VPS26B-204ENST00000527586 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
VPS26B-204ENST00000527586 PDE3BQ13370 1112 aa11.3□□□□□ -0.6
VPS26B-204ENST00000527586 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
VPS26B-204ENST00000527586 NEXMIFQ5QGS0 1516 aa11.3□□□□□ -0.6
VPS26B-204ENST00000527586 ABCC5O15440 1437 aa11.29□□□□□ -0.6
VPS26B-204ENST00000527586 GRIN3BO60391 1043 aa11.29□□□□□ -0.6
VPS26B-204ENST00000527586 KRT28Q7Z3Y7 464 aa11.29□□□□□ -0.6
VPS26B-204ENST00000527586 GOLGB1Q14789 3259 aaKnown RBP11.29□□□□□ -0.6
VPS26B-204ENST00000527586 KIF3CO14782 793 aa11.28□□□□□ -0.6
VPS26B-204ENST00000527586 FAM161AQ3B820 660 aa11.28□□□□□ -0.6
VPS26B-204ENST00000527586 NUTM2FA1L443 756 aa11.27□□□□□ -0.61
VPS26B-204ENST00000527586 PLSCR1O15162 318 aa11.27□□□□□ -0.61
VPS26B-204ENST00000527586 HTRA3P83110 453 aa11.27□□□□□ -0.61
VPS26B-204ENST00000527586 LMOD2Q6P5Q4 547 aa11.27□□□□□ -0.61
VPS26B-204ENST00000527586 STK32BQ9NY57 414 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms