RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 ADGRG1Q9Y653 693 aa6.35□□□□□ -1.39
C11orf54-204ENST00000527003 RCCD1A6NED2 376 aa6.34□□□□□ -1.39
C11orf54-204ENST00000527003 CD2BP2O95400 341 aaKnown RBP6.34□□□□□ -1.39
C11orf54-204ENST00000527003 MLLT3P42568 568 aaPredicted RBP6.34□□□□□ -1.39
C11orf54-204ENST00000527003 ERCC6Q03468 1493 aa6.34□□□□□ -1.4
C11orf54-204ENST00000527003 SLC10A3P09131 477 aa6.33□□□□□ -1.4
C11orf54-204ENST00000527003 P3H3Q8IVL6 736 aa6.33□□□□□ -1.4
C11orf54-204ENST00000527003 SPSB2Q99619 263 aa6.33□□□□□ -1.4
C11orf54-204ENST00000527003 PTGDRQ13258 359 aa6.32□□□□□ -1.4
C11orf54-204ENST00000527003 MRC2Q9UBG0 1479 aa6.31□□□□□ -1.4
C11orf54-204ENST00000527003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.31□□□□□ -1.4
C11orf54-204ENST00000527003 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
C11orf54-204ENST00000527003 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
C11orf54-204ENST00000527003 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
C11orf54-204ENST00000527003 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
C11orf54-204ENST00000527003 PRDM2Q13029 1718 aa6.3□□□□□ -1.4
C11orf54-204ENST00000527003 TTC24A2A3L6 582 aaPredicted RBP6.3□□□□□ -1.4
C11orf54-204ENST00000527003 FAM181BA6NEQ2 426 aa6.3□□□□□ -1.4
C11orf54-204ENST00000527003 SEMA3EO15041 775 aa6.3□□□□□ -1.4
C11orf54-204ENST00000527003 SENP2Q9HC62 589 aa6.3□□□□□ -1.4
C11orf54-204ENST00000527003 ATP13A2Q9NQ11 1180 aa6.3□□□□□ -1.4
C11orf54-204ENST00000527003 FCF1Q9Y324 198 aaKnown RBP6.3□□□□□ -1.4
C11orf54-204ENST00000527003 RSPH4AQ5TD94 716 aa6.29□□□□□ -1.4
C11orf54-204ENST00000527003 TRIM47Q96LD4 638 aa6.29□□□□□ -1.4
C11orf54-204ENST00000527003 TOPBP1Q92547 1522 aa6.29□□□□□ -1.4
C11orf54-204ENST00000527003 DNMBPQ6XZF7 1577 aa6.28□□□□□ -1.4
C11orf54-204ENST00000527003 SNRPBP14678 240 aaKnown RBP6.28□□□□□ -1.4
C11orf54-204ENST00000527003 PUS10Q3MIT2 529 aaKnown RBP6.28□□□□□ -1.4
C11orf54-204ENST00000527003 CUX1P39880 1505 aa6.28□□□□□ -1.4
C11orf54-204ENST00000527003 TOP2BQ02880 1626 aa6.28□□□□□ -1.4
C11orf54-204ENST00000527003 URB2Q14146 1524 aaKnown RBP6.27□□□□□ -1.41
C11orf54-204ENST00000527003 VSIG10Q8N0Z9 540 aa6.27□□□□□ -1.41
C11orf54-204ENST00000527003 EEA1Q15075 1411 aa6.26□□□□□ -1.41
C11orf54-204ENST00000527003 WDR62O43379 1518 aa6.26□□□□□ -1.41
C11orf54-204ENST00000527003 FAM161AQ3B820 660 aa6.26□□□□□ -1.41
C11orf54-204ENST00000527003 SNIP1Q8TAD8 396 aaKnown RBP6.26□□□□□ -1.41
C11orf54-204ENST00000527003 KIFC2Q96AC6 838 aa6.26□□□□□ -1.41
C11orf54-204ENST00000527003 THAP11Q96EK4 314 aa6.26□□□□□ -1.41
C11orf54-204ENST00000527003 SOGA1O94964 1423 aa6.25□□□□□ -1.41
C11orf54-204ENST00000527003 WNT7AO00755 349 aa6.25□□□□□ -1.41
C11orf54-204ENST00000527003 ZBTB24O43167 697 aaPredicted RBP6.25□□□□□ -1.41
C11orf54-204ENST00000527003 SMPD1P17405 629 aa6.25□□□□□ -1.41
C11orf54-204ENST00000527003 SYNJ1O43426 1573 aa6.25□□□□□ -1.41
C11orf54-204ENST00000527003 BIVM-ERCC5R4GMW8 1640 aa6.25□□□□□ -1.41
C11orf54-204ENST00000527003 POLA1P09884 1462 aaPredicted RBP6.24□□□□□ -1.41
C11orf54-204ENST00000527003 FGD5Q6ZNL6 1462 aa6.24□□□□□ -1.41
C11orf54-204ENST00000527003 IFT140Q96RY7 1462 aa6.24□□□□□ -1.41
C11orf54-204ENST00000527003 TESPA1A2RU30 521 aaPredicted RBP6.24□□□□□ -1.41
C11orf54-204ENST00000527003 OATP04181 439 aa6.24□□□□□ -1.41
C11orf54-204ENST00000527003 MORN1Q5T089 497 aa6.24□□□□□ -1.41
C11orf54-204ENST00000527003 KIF27Q86VH2 1401 aa6.24□□□□□ -1.41
C11orf54-204ENST00000527003 KIF21AQ7Z4S6 1674 aa6.23□□□□□ -1.41
C11orf54-204ENST00000527003 FMNL1O95466 1100 aaPredicted RBP6.23□□□□□ -1.41
C11orf54-204ENST00000527003 FAM160A2Q8N612 972 aaPredicted RBP6.23□□□□□ -1.41
C11orf54-204ENST00000527003 PXYLP1Q8TE99 480 aa6.23□□□□□ -1.41
C11orf54-204ENST00000527003 SLC16A10Q8TF71 515 aa6.23□□□□□ -1.41
C11orf54-204ENST00000527003 SALL2Q9Y467 1007 aaPredicted RBP6.23□□□□□ -1.41
C11orf54-204ENST00000527003 ABCA10Q8WWZ4 1543 aa6.23□□□□□ -1.41
C11orf54-204ENST00000527003 CUX2O14529 1486 aa6.22□□□□□ -1.41
C11orf54-204ENST00000527003 FCHSD2O94868 740 aa6.22□□□□□ -1.41
C11orf54-204ENST00000527003 RBM26Q5T8P6 1007 aaKnown RBP6.22□□□□□ -1.41
C11orf54-204ENST00000527003 THOC2Q8NI27 1593 aaKnown RBP6.22□□□□□ -1.41
C11orf54-204ENST00000527003 NUTM2FA1L443 756 aa6.21□□□□□ -1.42
C11orf54-204ENST00000527003 ATP6V1AP38606 617 aa6.21□□□□□ -1.42
C11orf54-204ENST00000527003 TRIM32Q13049 653 aa6.21□□□□□ -1.42
C11orf54-204ENST00000527003 MSS51Q4VC12 460 aa6.21□□□□□ -1.42
C11orf54-204ENST00000527003 ZSCAN1Q8NBB4 408 aa6.21□□□□□ -1.42
C11orf54-204ENST00000527003 REPIN1Q9BWE0 567 aaKnown RBP6.21□□□□□ -1.42
C11orf54-204ENST00000527003 PRDM9Q9NQV7 894 aa6.21□□□□□ -1.42
C11orf54-204ENST00000527003 J3QL48 77 aa6.2□□□□□ -1.42
C11orf54-204ENST00000527003 FUT2Q10981 343 aa6.2□□□□□ -1.42
C11orf54-204ENST00000527003 METTL3Q86U44 580 aaKnown RBP6.2□□□□□ -1.42
C11orf54-204ENST00000527003 NPAS3Q8IXF0 933 aa6.2□□□□□ -1.42
C11orf54-204ENST00000527003 MRGPRX2Q96LB1 330 aa6.2□□□□□ -1.42
C11orf54-204ENST00000527003 NXF1Q9UBU9 619 aaKnown RBP6.2□□□□□ -1.42
C11orf54-204ENST00000527003 SLC27A5Q9Y2P5 690 aa6.2□□□□□ -1.42
C11orf54-204ENST00000527003 RAD54L2Q9Y4B4 1467 aa6.2□□□□□ -1.42
C11orf54-204ENST00000527003 WDR97A6NE52 1622 aa6.19□□□□□ -1.42
C11orf54-204ENST00000527003 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
C11orf54-204ENST00000527003 IRF7Q92985 503 aa6.19□□□□□ -1.42
C11orf54-204ENST00000527003 IGF1RP08069 1367 aa6.18□□□□□ -1.42
C11orf54-204ENST00000527003 GMPRP36959 345 aa6.18□□□□□ -1.42
C11orf54-204ENST00000527003 BRICD5Q6PL45 260 aa6.18□□□□□ -1.42
C11orf54-204ENST00000527003 RDH13Q8NBN7 331 aa6.18□□□□□ -1.42
C11orf54-204ENST00000527003 HPS1Q92902 700 aa6.18□□□□□ -1.42
C11orf54-204ENST00000527003 TDRD9Q8NDG6 1382 aaKnown RBP6.18□□□□□ -1.42
C11orf54-204ENST00000527003 GAPVD1Q14C86 1478 aa6.17□□□□□ -1.42
C11orf54-204ENST00000527003 GPR37O15354 613 aa6.17□□□□□ -1.42
C11orf54-204ENST00000527003 FAM9AQ8IZU1 332 aaPredicted RBP6.17□□□□□ -1.42
C11orf54-204ENST00000527003 DAXXQ9UER7 740 aaPredicted RBP6.17□□□□□ -1.42
C11orf54-204ENST00000527003 TARBP1Q13395 1621 aaKnown RBP6.16□□□□□ -1.42
C11orf54-204ENST00000527003 GRIN2BQ13224 1484 aa6.15□□□□□ -1.42
C11orf54-204ENST00000527003 ERICH3Q5RHP9 1530 aa6.15□□□□□ -1.42
C11orf54-204ENST00000527003 FECHP22830 423 aa6.15□□□□□ -1.42
C11orf54-204ENST00000527003 GCGRP47871 477 aa6.15□□□□□ -1.42
C11orf54-204ENST00000527003 SMYD5Q6GMV2 418 aa6.15□□□□□ -1.42
C11orf54-204ENST00000527003 CARMIL1Q5VZK9 1371 aa6.15□□□□□ -1.43
C11orf54-204ENST00000527003 AQRO60306 1485 aaKnown RBP eCLIP6.15□□□□□ -1.43
C11orf54-204ENST00000527003 DDX11L8A8MPP1 907 aa6.14□□□□□ -1.43
C11orf54-204ENST00000527003 MMP16P51512 607 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms