RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.13■□□□□ 0.65
CCDC90B-205ENST00000525916 BRWD3Q6RI45 1802 aa19.13■□□□□ 0.65
CCDC90B-205ENST00000525916 PRAG1Q86YV5 1406 aa19.11■□□□□ 0.65
CCDC90B-205ENST00000525916 CDC42BPGQ6DT37 1551 aa19.1■□□□□ 0.65
CCDC90B-205ENST00000525916 BCL9LQ86UU0 1499 aa19.09■□□□□ 0.65
CCDC90B-205ENST00000525916 PXDNQ92626 1479 aa19.09■□□□□ 0.65
CCDC90B-205ENST00000525916 FOXD1Q16676 465 aa19.08■□□□□ 0.64
CCDC90B-205ENST00000525916 HFM1A2PYH4 1435 aa19.08■□□□□ 0.64
CCDC90B-205ENST00000525916 GLI3P10071 1580 aa19.06■□□□□ 0.64
CCDC90B-205ENST00000525916 NPHP3Q7Z494 1330 aa19.05■□□□□ 0.64
CCDC90B-205ENST00000525916 VGFO15240 615 aaPredicted RBP19.04■□□□□ 0.64
CCDC90B-205ENST00000525916 XPCQ01831 940 aaPredicted RBP19.04■□□□□ 0.64
CCDC90B-205ENST00000525916 ESCO1Q5FWF5 840 aa19.03■□□□□ 0.64
CCDC90B-205ENST00000525916 CCDC125Q86Z20 511 aa19.03■□□□□ 0.64
CCDC90B-205ENST00000525916 RGPD8O14715 1765 aaPredicted RBP19.02■□□□□ 0.64
CCDC90B-205ENST00000525916 GJD4Q96KN9 370 aaPredicted RBP19.02■□□□□ 0.64
CCDC90B-205ENST00000525916 FMN2Q9NZ56 1722 aa19.02■□□□□ 0.63
CCDC90B-205ENST00000525916 USP32Q8NFA0 1604 aa19.01■□□□□ 0.63
CCDC90B-205ENST00000525916 KNDC1Q76NI1 1749 aa19■□□□□ 0.63
CCDC90B-205ENST00000525916 FOXO3O43524 673 aa19■□□□□ 0.63
CCDC90B-205ENST00000525916 RALGAPBQ86X10 1494 aa19■□□□□ 0.63
CCDC90B-205ENST00000525916 PLCH1Q4KWH8 1693 aa19■□□□□ 0.63
CCDC90B-205ENST00000525916 NAIPQ13075 1403 aa19■□□□□ 0.63
CCDC90B-205ENST00000525916 KIF1AQ12756 1690 aa18.99■□□□□ 0.63
CCDC90B-205ENST00000525916 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
CCDC90B-205ENST00000525916 IFT172Q9UG01 1749 aa18.99■□□□□ 0.63
CCDC90B-205ENST00000525916 SLIT2O94813 1529 aa18.99■□□□□ 0.63
CCDC90B-205ENST00000525916 BLMP54132 1417 aaPredicted RBP18.99■□□□□ 0.63
CCDC90B-205ENST00000525916 ABCA3Q99758 1704 aa18.98■□□□□ 0.63
CCDC90B-205ENST00000525916 LRP5O75197 1615 aa18.98■□□□□ 0.63
CCDC90B-205ENST00000525916 NUTM2FA1L443 756 aa18.97■□□□□ 0.63
CCDC90B-205ENST00000525916 RPGRIP1LQ68CZ1 1315 aa18.97■□□□□ 0.63
CCDC90B-205ENST00000525916 NWD2Q9ULI1 1742 aa18.96■□□□□ 0.63
CCDC90B-205ENST00000525916 LRPPRCP42704 1394 aaKnown RBP18.95■□□□□ 0.62
CCDC90B-205ENST00000525916 DEFB132Q7Z7B7 95 aa18.95■□□□□ 0.62
CCDC90B-205ENST00000525916 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
CCDC90B-205ENST00000525916 TECPR2O15040 1411 aa18.93■□□□□ 0.62
CCDC90B-205ENST00000525916 WAPLQ7Z5K2 1190 aa18.93■□□□□ 0.62
CCDC90B-205ENST00000525916 STK26Q9P289 416 aa18.92■□□□□ 0.62
CCDC90B-205ENST00000525916 SPATA31A3Q5VYP0 1347 aa18.92■□□□□ 0.62
CCDC90B-205ENST00000525916 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
CCDC90B-205ENST00000525916 ADGRF5Q8IZF2 1346 aa18.91■□□□□ 0.62
CCDC90B-205ENST00000525916 PLEKHH1Q9ULM0 1364 aa18.91■□□□□ 0.62
CCDC90B-205ENST00000525916 CCDC144AA2RUR9 1427 aa18.91■□□□□ 0.62
CCDC90B-205ENST00000525916 SF3B2Q13435 895 aaKnown RBP18.88■□□□□ 0.61
CCDC90B-205ENST00000525916 SEPT12Q8IYM1 358 aa18.88■□□□□ 0.61
CCDC90B-205ENST00000525916 NRAPQ86VF7 1730 aa18.88■□□□□ 0.61
CCDC90B-205ENST00000525916 TNS3Q68CZ2 1445 aa18.87■□□□□ 0.61
CCDC90B-205ENST00000525916 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
CCDC90B-205ENST00000525916 KRT28Q7Z3Y7 464 aa18.86■□□□□ 0.61
CCDC90B-205ENST00000525916 ABCC11Q96J66 1382 aa18.85■□□□□ 0.61
CCDC90B-205ENST00000525916 PLEKHG5O94827 1062 aa18.85■□□□□ 0.61
CCDC90B-205ENST00000525916 HAP1P54257 671 aaPredicted RBP18.85■□□□□ 0.61
CCDC90B-205ENST00000525916 TMEM132EQ6IEE7 984 aa18.85■□□□□ 0.61
CCDC90B-205ENST00000525916 RGPD1P0DJD0 1748 aa18.84■□□□□ 0.61
CCDC90B-205ENST00000525916 VPS72Q15906 364 aa18.84■□□□□ 0.61
CCDC90B-205ENST00000525916 CABLES1Q8TDN4 633 aa18.84■□□□□ 0.61
CCDC90B-205ENST00000525916 CCDC9Q9Y3X0 531 aaKnown RBP18.84■□□□□ 0.61
CCDC90B-205ENST00000525916 PIK3C2GO75747 1445 aa18.83■□□□□ 0.6
CCDC90B-205ENST00000525916 SPATA31E1Q6ZUB1 1445 aa18.83■□□□□ 0.6
CCDC90B-205ENST00000525916 YTHDC2Q9H6S0 1430 aaKnown RBP18.83■□□□□ 0.6
CCDC90B-205ENST00000525916 RGL3Q3MIN7 710 aa18.82■□□□□ 0.6
CCDC90B-205ENST00000525916 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
CCDC90B-205ENST00000525916 PSDA5PKW4 1024 aaPredicted RBP18.81■□□□□ 0.6
CCDC90B-205ENST00000525916 ANKRD30BQ9BXX2 1392 aa18.81■□□□□ 0.6
CCDC90B-205ENST00000525916 TNS1Q9HBL0 1735 aaKnown RBP18.8■□□□□ 0.6
CCDC90B-205ENST00000525916 TRPM3Q9HCF6 1732 aaPredicted RBP18.8■□□□□ 0.6
CCDC90B-205ENST00000525916 NRXN1Q9ULB1 1477 aa18.8■□□□□ 0.6
CCDC90B-205ENST00000525916 ONECUT3O60422 494 aaPredicted RBP18.8■□□□□ 0.6
CCDC90B-205ENST00000525916 PHF8Q9UPP1 1060 aa18.79■□□□□ 0.6
CCDC90B-205ENST00000525916 A0A0G2JS52 829 aa18.78■□□□□ 0.6
CCDC90B-205ENST00000525916 MYT1Q01538 1121 aa18.78■□□□□ 0.6
CCDC90B-205ENST00000525916 LMOD2Q6P5Q4 547 aa18.78■□□□□ 0.6
CCDC90B-205ENST00000525916 ALS2Q96Q42 1657 aa18.78■□□□□ 0.6
CCDC90B-205ENST00000525916 SBNO1A3KN83 1393 aa18.78■□□□□ 0.6
CCDC90B-205ENST00000525916 COL14A1Q05707 1796 aaKnown RBP18.78■□□□□ 0.6
CCDC90B-205ENST00000525916 HRCP23327 699 aa18.77■□□□□ 0.6
CCDC90B-205ENST00000525916 BAG6P46379 1132 aa18.77■□□□□ 0.6
CCDC90B-205ENST00000525916 PSME1Q06323 249 aa18.77■□□□□ 0.6
CCDC90B-205ENST00000525916 CRYBG1Q9Y4K1 1723 aa18.77■□□□□ 0.59
CCDC90B-205ENST00000525916 ARHGEF10O15013 1369 aa18.76■□□□□ 0.59
CCDC90B-205ENST00000525916 FAM83GA6ND36 823 aa18.74■□□□□ 0.59
CCDC90B-205ENST00000525916 FAM98CQ17RN3 349 aaKnown RBP18.74■□□□□ 0.59
CCDC90B-205ENST00000525916 THSD7AQ9UPZ6 1657 aa18.73■□□□□ 0.59
CCDC90B-205ENST00000525916 ADGRB2O60241 1585 aa18.72■□□□□ 0.59
CCDC90B-205ENST00000525916 EN1Q05925 392 aaPredicted RBP18.72■□□□□ 0.59
CCDC90B-205ENST00000525916 SAFB2Q14151 953 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC90B-205ENST00000525916 FAM182BQ5T319 152 aa18.71■□□□□ 0.59
CCDC90B-205ENST00000525916 PMFBP1Q8TBY8 1022 aa18.71■□□□□ 0.59
CCDC90B-205ENST00000525916 SIRT1Q96EB6 747 aa18.71■□□□□ 0.59
CCDC90B-205ENST00000525916 BTG4Q9NY30 223 aa18.7■□□□□ 0.58
CCDC90B-205ENST00000525916 PRAM1Q96QH2 718 aa18.69■□□□□ 0.58
CCDC90B-205ENST00000525916 DHX57Q6P158 1386 aaKnown RBP18.68■□□□□ 0.58
CCDC90B-205ENST00000525916 ANKARQ7Z5J8 1434 aa18.68■□□□□ 0.58
CCDC90B-205ENST00000525916 R3HDM1Q15032 1099 aaKnown RBP18.68■□□□□ 0.58
CCDC90B-205ENST00000525916 C14orf93Q9H972 538 aaKnown RBP18.68■□□□□ 0.58
CCDC90B-205ENST00000525916 DLC1Q96QB1 1528 aa18.68■□□□□ 0.58
CCDC90B-205ENST00000525916 DISP2A7MBM2 1401 aa18.67■□□□□ 0.58
CCDC90B-205ENST00000525916 CFAP70Q5T0N1 1121 aa18.67■□□□□ 0.58
CCDC90B-205ENST00000525916 MPHOSPH9Q99550 1183 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms