RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 CHD2O14647 1828 aaKnown RBP12.02□□□□□ -0.49
PABPC4-220ENST00000525669 CABP2Q9NPB3 220 aa12.01□□□□□ -0.49
PABPC4-220ENST00000525669 EVC2Q86UK5 1308 aa12.01□□□□□ -0.49
PABPC4-220ENST00000525669 CCDC184Q52MB2 194 aa12□□□□□ -0.49
PABPC4-220ENST00000525669 ANKLE2Q86XL3 938 aa12□□□□□ -0.49
PABPC4-220ENST00000525669 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
PABPC4-220ENST00000525669 ROBO2Q9HCK4 1378 aa12□□□□□ -0.49
PABPC4-220ENST00000525669 TECPR2O15040 1411 aa12□□□□□ -0.49
PABPC4-220ENST00000525669 CCER2I3L3R5 266 aa11.99□□□□□ -0.49
PABPC4-220ENST00000525669 PER1O15534 1290 aaPredicted RBP11.99□□□□□ -0.49
PABPC4-220ENST00000525669 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
PABPC4-220ENST00000525669 SRPK2P78362 688 aaKnown RBP11.99□□□□□ -0.49
PABPC4-220ENST00000525669 TMC1Q8TDI8 760 aa11.99□□□□□ -0.49
PABPC4-220ENST00000525669 CC2D1BQ5T0F9 858 aaKnown RBP11.98□□□□□ -0.49
PABPC4-220ENST00000525669 TBX22Q9Y458 520 aa11.98□□□□□ -0.49
PABPC4-220ENST00000525669 RGPD8O14715 1765 aaPredicted RBP11.97□□□□□ -0.49
PABPC4-220ENST00000525669 NPHP4O75161 1426 aaPredicted RBP11.97□□□□□ -0.49
PABPC4-220ENST00000525669 FAM135BQ49AJ0 1406 aa11.97□□□□□ -0.49
PABPC4-220ENST00000525669 CDK19Q9BWU1 502 aa11.97□□□□□ -0.49
PABPC4-220ENST00000525669 SLC12A5Q9H2X9 1139 aa11.97□□□□□ -0.49
PABPC4-220ENST00000525669 AMOTL2Q9Y2J4 779 aa11.97□□□□□ -0.49
PABPC4-220ENST00000525669 ADGRB2O60241 1585 aa11.96□□□□□ -0.5
PABPC4-220ENST00000525669 KTN1Q86UP2 1357 aaKnown RBP11.95□□□□□ -0.5
PABPC4-220ENST00000525669 ITSN1Q15811 1721 aa11.95□□□□□ -0.5
PABPC4-220ENST00000525669 NALCNQ8IZF0 1738 aa11.95□□□□□ -0.5
PABPC4-220ENST00000525669 HSPA2P54652 639 aa11.95□□□□□ -0.5
PABPC4-220ENST00000525669 CARD14Q9BXL6 1004 aa11.95□□□□□ -0.5
PABPC4-220ENST00000525669 SIRT1Q96EB6 747 aa11.94□□□□□ -0.5
PABPC4-220ENST00000525669 KNSTRNQ9Y448 316 aa11.94□□□□□ -0.5
PABPC4-220ENST00000525669 KIF20BQ96Q89 1820 aa11.94□□□□□ -0.5
PABPC4-220ENST00000525669 TOPAZ1Q8N9V7 1692 aa11.94□□□□□ -0.5
PABPC4-220ENST00000525669 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
PABPC4-220ENST00000525669 AKAP12Q02952 1782 aa11.93□□□□□ -0.5
PABPC4-220ENST00000525669 STRCQ7RTU9 1775 aa11.93□□□□□ -0.5
PABPC4-220ENST00000525669 MSH5O43196 834 aa11.93□□□□□ -0.5
PABPC4-220ENST00000525669 NSD3Q9BZ95 1437 aa11.93□□□□□ -0.5
PABPC4-220ENST00000525669 PARD3Q8TEW0 1356 aa11.92□□□□□ -0.5
PABPC4-220ENST00000525669 STRCP1A6NGW2 1772 aa11.92□□□□□ -0.5
PABPC4-220ENST00000525669 LMTK3Q96Q04 1460 aa11.92□□□□□ -0.5
PABPC4-220ENST00000525669 WASLO00401 505 aaPredicted RBP11.92□□□□□ -0.5
PABPC4-220ENST00000525669 KCNA6P17658 529 aa11.92□□□□□ -0.5
PABPC4-220ENST00000525669 PUS7Q96PZ0 661 aaKnown RBP11.92□□□□□ -0.5
PABPC4-220ENST00000525669 MRS2Q9HD23 443 aa11.92□□□□□ -0.5
PABPC4-220ENST00000525669 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
PABPC4-220ENST00000525669 ATAD2Q6PL18 1390 aa11.92□□□□□ -0.5
PABPC4-220ENST00000525669 ANKRD26Q9UPS8 1709 aa11.91□□□□□ -0.5
PABPC4-220ENST00000525669 CD163L1Q9NR16 1453 aa11.91□□□□□ -0.5
PABPC4-220ENST00000525669 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
PABPC4-220ENST00000525669 RALBP1Q15311 655 aa11.91□□□□□ -0.5
PABPC4-220ENST00000525669 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
PABPC4-220ENST00000525669 RBM33Q96EV2 1170 aaKnown RBP11.91□□□□□ -0.5
PABPC4-220ENST00000525669 FMN2Q9NZ56 1722 aa11.91□□□□□ -0.5
PABPC4-220ENST00000525669 A0A1W2PP64 1363 aa11.91□□□□□ -0.5
PABPC4-220ENST00000525669 PIK3R4Q99570 1358 aa11.91□□□□□ -0.5
PABPC4-220ENST00000525669 MYBBP1AQ9BQG0 1328 aaKnown RBP11.9□□□□□ -0.5
PABPC4-220ENST00000525669 NWD1Q149M9 1564 aa11.9□□□□□ -0.5
PABPC4-220ENST00000525669 MON2Q7Z3U7 1717 aa11.9□□□□□ -0.5
PABPC4-220ENST00000525669 CABP1Q9NZU7 370 aa11.9□□□□□ -0.5
PABPC4-220ENST00000525669 ANKRD36BQ8N2N9 1353 aa11.9□□□□□ -0.5
PABPC4-220ENST00000525669 PPIP5K1Q6PFW1 1433 aa11.89□□□□□ -0.51
PABPC4-220ENST00000525669 FAM9BQ8IZU0 186 aa11.89□□□□□ -0.51
PABPC4-220ENST00000525669 ATP7BP35670 1465 aa11.89□□□□□ -0.51
PABPC4-220ENST00000525669 PRR36Q9H6K5 1346 aa11.88□□□□□ -0.51
PABPC4-220ENST00000525669 CDC42BPGQ6DT37 1551 aa11.88□□□□□ -0.51
PABPC4-220ENST00000525669 NUDT16Q96DE0 195 aaKnown RBP11.88□□□□□ -0.51
PABPC4-220ENST00000525669 NINLQ9Y2I6 1382 aa11.87□□□□□ -0.51
PABPC4-220ENST00000525669 TERF2IPQ9NYB0 399 aa11.86□□□□□ -0.51
PABPC4-220ENST00000525669 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
PABPC4-220ENST00000525669 NRKQ7Z2Y5 1582 aa11.85□□□□□ -0.51
PABPC4-220ENST00000525669 BRD4O60885 1362 aaPredicted RBP11.85□□□□□ -0.51
PABPC4-220ENST00000525669 NPC1L1Q9UHC9 1359 aa11.85□□□□□ -0.51
PABPC4-220ENST00000525669 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
PABPC4-220ENST00000525669 HDGFL2Q7Z4V5 671 aaPredicted RBP11.85□□□□□ -0.51
PABPC4-220ENST00000525669 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
PABPC4-220ENST00000525669 TNNT2P45379 298 aaPredicted RBP11.84□□□□□ -0.51
PABPC4-220ENST00000525669 CENPBP07199 599 aaPredicted RBP11.83□□□□□ -0.52
PABPC4-220ENST00000525669 MORC1Q86VD1 984 aa11.83□□□□□ -0.52
PABPC4-220ENST00000525669 NLRP13Q86W25 1043 aa11.83□□□□□ -0.52
PABPC4-220ENST00000525669 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
PABPC4-220ENST00000525669 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
PABPC4-220ENST00000525669 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
PABPC4-220ENST00000525669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.82□□□□□ -0.52
PABPC4-220ENST00000525669 GGNBP2Q9H3C7 697 aa11.82□□□□□ -0.52
PABPC4-220ENST00000525669 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
PABPC4-220ENST00000525669 ADGRL3Q9HAR2 1447 aa11.81□□□□□ -0.52
PABPC4-220ENST00000525669 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
PABPC4-220ENST00000525669 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
PABPC4-220ENST00000525669 PMFBP1Q8TBY8 1022 aa11.81□□□□□ -0.52
PABPC4-220ENST00000525669 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
PABPC4-220ENST00000525669 SHPRHQ149N8 1683 aa11.81□□□□□ -0.52
PABPC4-220ENST00000525669 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.52
PABPC4-220ENST00000525669 MAP2P11137 1827 aaKnown RBP11.8□□□□□ -0.52
PABPC4-220ENST00000525669 ACEP12821 1306 aa11.8□□□□□ -0.52
PABPC4-220ENST00000525669 EDC4Q6P2E9 1401 aaKnown RBP11.79□□□□□ -0.52
PABPC4-220ENST00000525669 FYB1O15117 783 aa11.79□□□□□ -0.52
PABPC4-220ENST00000525669 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
PABPC4-220ENST00000525669 NSD2O96028 1365 aa11.79□□□□□ -0.52
PABPC4-220ENST00000525669 ANKARQ7Z5J8 1434 aa11.78□□□□□ -0.52
PABPC4-220ENST00000525669 NME9Q86XW9 330 aa11.78□□□□□ -0.52
PABPC4-220ENST00000525669 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms