RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 FOXD1Q16676 465 aa22.71■■□□□ 1.23
PACS1-203ENST00000524815 CCDC125Q86Z20 511 aa22.7■■□□□ 1.22
PACS1-203ENST00000524815 KIF1BO60333 1816 aa22.68■■□□□ 1.22
PACS1-203ENST00000524815 HFM1A2PYH4 1435 aa22.68■■□□□ 1.22
PACS1-203ENST00000524815 ESCO1Q5FWF5 840 aa22.67■■□□□ 1.22
PACS1-203ENST00000524815 GJD4Q96KN9 370 aaPredicted RBP22.67■■□□□ 1.22
PACS1-203ENST00000524815 PXDNQ92626 1479 aa22.66■■□□□ 1.22
PACS1-203ENST00000524815 NPHP3Q7Z494 1330 aa22.66■■□□□ 1.22
PACS1-203ENST00000524815 XPCQ01831 940 aaPredicted RBP22.64■■□□□ 1.21
PACS1-203ENST00000524815 RPGRIP1LQ68CZ1 1315 aa22.63■■□□□ 1.21
PACS1-203ENST00000524815 FOXO3O43524 673 aa22.63■■□□□ 1.21
PACS1-203ENST00000524815 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
PACS1-203ENST00000524815 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
PACS1-203ENST00000524815 CDC42BPGQ6DT37 1551 aa22.61■■□□□ 1.21
PACS1-203ENST00000524815 NAIPQ13075 1403 aa22.58■■□□□ 1.21
PACS1-203ENST00000524815 UNC5CLQ8IV45 518 aa22.58■■□□□ 1.21
PACS1-203ENST00000524815 RALGAPBQ86X10 1494 aa22.57■■□□□ 1.2
PACS1-203ENST00000524815 GLI3P10071 1580 aa22.57■■□□□ 1.2
PACS1-203ENST00000524815 SLIT2O94813 1529 aa22.57■■□□□ 1.2
PACS1-203ENST00000524815 BLMP54132 1417 aaPredicted RBP22.57■■□□□ 1.2
PACS1-203ENST00000524815 PPLO60437 1756 aa22.56■■□□□ 1.2
PACS1-203ENST00000524815 LRPPRCP42704 1394 aaKnown RBP22.56■■□□□ 1.2
PACS1-203ENST00000524815 NUTM2FA1L443 756 aa22.56■■□□□ 1.2
PACS1-203ENST00000524815 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.55■■□□□ 1.2
PACS1-203ENST00000524815 WAPLQ7Z5K2 1190 aa22.55■■□□□ 1.2
PACS1-203ENST00000524815 DEFB132Q7Z7B7 95 aa22.54■■□□□ 1.2
PACS1-203ENST00000524815 SPATA31A3Q5VYP0 1347 aa22.53■■□□□ 1.2
PACS1-203ENST00000524815 ADGRF5Q8IZF2 1346 aa22.53■■□□□ 1.2
PACS1-203ENST00000524815 STK26Q9P289 416 aa22.52■■□□□ 1.2
PACS1-203ENST00000524815 TECPR2O15040 1411 aa22.51■■□□□ 1.19
PACS1-203ENST00000524815 PLEKHH1Q9ULM0 1364 aa22.5■■□□□ 1.19
PACS1-203ENST00000524815 SEPT12Q8IYM1 358 aa22.49■■□□□ 1.19
PACS1-203ENST00000524815 SLC4A1APQ9BWU0 796 aaKnown RBP22.49■■□□□ 1.19
PACS1-203ENST00000524815 BRWD3Q6RI45 1802 aa22.49■■□□□ 1.19
PACS1-203ENST00000524815 KRT28Q7Z3Y7 464 aa22.47■■□□□ 1.19
PACS1-203ENST00000524815 ABCC11Q96J66 1382 aa22.47■■□□□ 1.19
PACS1-203ENST00000524815 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
PACS1-203ENST00000524815 ONECUT3O60422 494 aaPredicted RBP22.46■■□□□ 1.19
PACS1-203ENST00000524815 VPS72Q15906 364 aa22.46■■□□□ 1.19
PACS1-203ENST00000524815 TMEM132EQ6IEE7 984 aa22.46■■□□□ 1.19
PACS1-203ENST00000524815 RRBP1Q9P2E9 1410 aaKnown RBP22.46■■□□□ 1.19
PACS1-203ENST00000524815 CCDC144AA2RUR9 1427 aa22.45■■□□□ 1.18
PACS1-203ENST00000524815 SF3B2Q13435 895 aaKnown RBP22.44■■□□□ 1.18
PACS1-203ENST00000524815 FMN2Q9NZ56 1722 aa22.44■■□□□ 1.18
PACS1-203ENST00000524815 CABLES1Q8TDN4 633 aa22.43■■□□□ 1.18
PACS1-203ENST00000524815 RGL3Q3MIN7 710 aa22.42■■□□□ 1.18
PACS1-203ENST00000524815 KIF1AQ12756 1690 aa22.42■■□□□ 1.18
PACS1-203ENST00000524815 KRT27Q7Z3Y8 459 aa22.41■■□□□ 1.18
PACS1-203ENST00000524815 LRP5O75197 1615 aa22.41■■□□□ 1.18
PACS1-203ENST00000524815 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
PACS1-203ENST00000524815 KNDC1Q76NI1 1749 aa22.4■■□□□ 1.18
PACS1-203ENST00000524815 TNS3Q68CZ2 1445 aa22.4■■□□□ 1.18
PACS1-203ENST00000524815 HAP1P54257 671 aaPredicted RBP22.39■■□□□ 1.17
PACS1-203ENST00000524815 PHF8Q9UPP1 1060 aa22.39■■□□□ 1.17
PACS1-203ENST00000524815 YTHDC2Q9H6S0 1430 aaKnown RBP22.39■■□□□ 1.17
PACS1-203ENST00000524815 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
PACS1-203ENST00000524815 PLEKHG5O94827 1062 aa22.38■■□□□ 1.17
PACS1-203ENST00000524815 CCDC9Q9Y3X0 531 aaKnown RBP22.38■■□□□ 1.17
PACS1-203ENST00000524815 PLCH1Q4KWH8 1693 aa22.37■■□□□ 1.17
PACS1-203ENST00000524815 FAM83GA6ND36 823 aa22.37■■□□□ 1.17
PACS1-203ENST00000524815 PSME1Q06323 249 aa22.37■■□□□ 1.17
PACS1-203ENST00000524815 SIRT1Q96EB6 747 aa22.37■■□□□ 1.17
PACS1-203ENST00000524815 PIK3C2GO75747 1445 aa22.37■■□□□ 1.17
PACS1-203ENST00000524815 PSDA5PKW4 1024 aaPredicted RBP22.36■■□□□ 1.17
PACS1-203ENST00000524815 IFT172Q9UG01 1749 aa22.36■■□□□ 1.17
PACS1-203ENST00000524815 NWD2Q9ULI1 1742 aa22.36■■□□□ 1.17
PACS1-203ENST00000524815 SBNO1A3KN83 1393 aa22.36■■□□□ 1.17
PACS1-203ENST00000524815 RGPD8O14715 1765 aaPredicted RBP22.35■■□□□ 1.17
PACS1-203ENST00000524815 HRCP23327 699 aa22.34■■□□□ 1.17
PACS1-203ENST00000524815 LMOD2Q6P5Q4 547 aa22.33■■□□□ 1.17
PACS1-203ENST00000524815 NRXN1Q9ULB1 1477 aa22.33■■□□□ 1.16
PACS1-203ENST00000524815 ABCA3Q99758 1704 aa22.32■■□□□ 1.16
PACS1-203ENST00000524815 BAG6P46379 1132 aa22.32■■□□□ 1.16
PACS1-203ENST00000524815 ARHGEF10O15013 1369 aa22.31■■□□□ 1.16
PACS1-203ENST00000524815 FAM98CQ17RN3 349 aaKnown RBP22.3■■□□□ 1.16
PACS1-203ENST00000524815 C14orf93Q9H972 538 aaKnown RBP22.3■■□□□ 1.16
PACS1-203ENST00000524815 A0A0G2JS52 829 aa22.28■■□□□ 1.16
PACS1-203ENST00000524815 MYT1Q01538 1121 aa22.28■■□□□ 1.16
PACS1-203ENST00000524815 EN1Q05925 392 aaPredicted RBP22.27■■□□□ 1.16
PACS1-203ENST00000524815 PMFBP1Q8TBY8 1022 aa22.27■■□□□ 1.16
PACS1-203ENST00000524815 MPHOSPH9Q99550 1183 aa22.27■■□□□ 1.16
PACS1-203ENST00000524815 BTG4Q9NY30 223 aa22.27■■□□□ 1.16
PACS1-203ENST00000524815 NRAPQ86VF7 1730 aa22.26■■□□□ 1.15
PACS1-203ENST00000524815 SAFB2Q14151 953 aaKnown RBP eCLIP22.26■■□□□ 1.15
PACS1-203ENST00000524815 CFAP70Q5T0N1 1121 aa22.26■■□□□ 1.15
PACS1-203ENST00000524815 PRAM1Q96QH2 718 aa22.26■■□□□ 1.15
PACS1-203ENST00000524815 FAM182BQ5T319 152 aa22.25■■□□□ 1.15
PACS1-203ENST00000524815 DHX57Q6P158 1386 aaKnown RBP22.25■■□□□ 1.15
PACS1-203ENST00000524815 R3HDM1Q15032 1099 aaKnown RBP22.22■■□□□ 1.15
PACS1-203ENST00000524815 ANKARQ7Z5J8 1434 aa22.22■■□□□ 1.15
PACS1-203ENST00000524815 SPATA31A5Q5VU36 1347 aa22.21■■□□□ 1.15
PACS1-203ENST00000524815 SPATA31A7Q8IWB4 1347 aa22.21■■□□□ 1.15
PACS1-203ENST00000524815 TRPM3Q9HCF6 1732 aaPredicted RBP22.2■■□□□ 1.14
PACS1-203ENST00000524815 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.14
PACS1-203ENST00000524815 DISP2A7MBM2 1401 aa22.19■■□□□ 1.14
PACS1-203ENST00000524815 COL14A1Q05707 1796 aaKnown RBP22.19■■□□□ 1.14
PACS1-203ENST00000524815 ALS2Q96Q42 1657 aa22.17■■□□□ 1.14
PACS1-203ENST00000524815 EZH2Q15910 746 aaKnown RBP22.17■■□□□ 1.14
PACS1-203ENST00000524815 POGKQ9P215 609 aa22.17■■□□□ 1.14
PACS1-203ENST00000524815 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms