RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 CLTCL1P53675 1640 aa12.03□□□□□ -0.48
NSMCE2-213ENST00000523824 RPGRIP1LQ68CZ1 1315 aa12.02□□□□□ -0.49
NSMCE2-213ENST00000523824 NPHP3Q7Z494 1330 aa12.02□□□□□ -0.49
NSMCE2-213ENST00000523824 ATRNO75882 1429 aa12.02□□□□□ -0.49
NSMCE2-213ENST00000523824 LAMC1P11047 1609 aa12.01□□□□□ -0.49
NSMCE2-213ENST00000523824 HFM1A2PYH4 1435 aa12.01□□□□□ -0.49
NSMCE2-213ENST00000523824 FOXO3O43524 673 aa12□□□□□ -0.49
NSMCE2-213ENST00000523824 XPCQ01831 940 aaPredicted RBP12□□□□□ -0.49
NSMCE2-213ENST00000523824 GJD4Q96KN9 370 aaPredicted RBP12□□□□□ -0.49
NSMCE2-213ENST00000523824 KIF1BO60333 1816 aa11.99□□□□□ -0.49
NSMCE2-213ENST00000523824 BCL9LQ86UU0 1499 aa11.98□□□□□ -0.49
NSMCE2-213ENST00000523824 LRPPRCP42704 1394 aaKnown RBP11.98□□□□□ -0.49
NSMCE2-213ENST00000523824 NUTM2FA1L443 756 aa11.98□□□□□ -0.49
NSMCE2-213ENST00000523824 MYOM2P54296 1465 aa11.97□□□□□ -0.49
NSMCE2-213ENST00000523824 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
NSMCE2-213ENST00000523824 STK26Q9P289 416 aa11.97□□□□□ -0.49
NSMCE2-213ENST00000523824 COL22A1Q8NFW1 1626 aaPredicted RBP11.97□□□□□ -0.49
NSMCE2-213ENST00000523824 PRAG1Q86YV5 1406 aa11.96□□□□□ -0.49
NSMCE2-213ENST00000523824 UNC5CLQ8IV45 518 aa11.96□□□□□ -0.49
NSMCE2-213ENST00000523824 NAIPQ13075 1403 aa11.95□□□□□ -0.5
NSMCE2-213ENST00000523824 WAPLQ7Z5K2 1190 aa11.95□□□□□ -0.5
NSMCE2-213ENST00000523824 PXDNQ92626 1479 aa11.95□□□□□ -0.5
NSMCE2-213ENST00000523824 SF3B2Q13435 895 aaKnown RBP11.94□□□□□ -0.5
NSMCE2-213ENST00000523824 EP400Q96L91 3159 aa11.93□□□□□ -0.5
NSMCE2-213ENST00000523824 CDC42BPGQ6DT37 1551 aa11.93□□□□□ -0.5
NSMCE2-213ENST00000523824 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
NSMCE2-213ENST00000523824 RGL3Q3MIN7 710 aa11.93□□□□□ -0.5
NSMCE2-213ENST00000523824 SPATA31A3Q5VYP0 1347 aa11.92□□□□□ -0.5
NSMCE2-213ENST00000523824 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
NSMCE2-213ENST00000523824 TMEM132EQ6IEE7 984 aa11.92□□□□□ -0.5
NSMCE2-213ENST00000523824 KRT28Q7Z3Y7 464 aa11.92□□□□□ -0.5
NSMCE2-213ENST00000523824 BLMP54132 1417 aaPredicted RBP11.92□□□□□ -0.5
NSMCE2-213ENST00000523824 RALGAPBQ86X10 1494 aa11.91□□□□□ -0.5
NSMCE2-213ENST00000523824 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
NSMCE2-213ENST00000523824 SEPT12Q8IYM1 358 aa11.91□□□□□ -0.5
NSMCE2-213ENST00000523824 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
NSMCE2-213ENST00000523824 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
NSMCE2-213ENST00000523824 PSME1Q06323 249 aa11.9□□□□□ -0.5
NSMCE2-213ENST00000523824 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
NSMCE2-213ENST00000523824 SLIT2O94813 1529 aa11.9□□□□□ -0.5
NSMCE2-213ENST00000523824 ABCC11Q96J66 1382 aa11.9□□□□□ -0.5
NSMCE2-213ENST00000523824 PPLO60437 1756 aa11.9□□□□□ -0.51
NSMCE2-213ENST00000523824 MARF1Q9Y4F3 1742 aaKnown RBP11.89□□□□□ -0.51
NSMCE2-213ENST00000523824 RRBP1Q9P2E9 1410 aaKnown RBP11.89□□□□□ -0.51
NSMCE2-213ENST00000523824 VPS72Q15906 364 aa11.89□□□□□ -0.51
NSMCE2-213ENST00000523824 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
NSMCE2-213ENST00000523824 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
NSMCE2-213ENST00000523824 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
NSMCE2-213ENST00000523824 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
NSMCE2-213ENST00000523824 TECPR2O15040 1411 aa11.88□□□□□ -0.51
NSMCE2-213ENST00000523824 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
NSMCE2-213ENST00000523824 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
NSMCE2-213ENST00000523824 ANKRD30BQ9BXX2 1392 aa11.88□□□□□ -0.51
NSMCE2-213ENST00000523824 GLI3P10071 1580 aa11.88□□□□□ -0.51
NSMCE2-213ENST00000523824 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
NSMCE2-213ENST00000523824 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.86□□□□□ -0.51
NSMCE2-213ENST00000523824 A0A0G2JS52 829 aa11.86□□□□□ -0.51
NSMCE2-213ENST00000523824 ONECUT3O60422 494 aaPredicted RBP11.86□□□□□ -0.51
NSMCE2-213ENST00000523824 MYT1Q01538 1121 aa11.86□□□□□ -0.51
NSMCE2-213ENST00000523824 SIRT1Q96EB6 747 aa11.86□□□□□ -0.51
NSMCE2-213ENST00000523824 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
NSMCE2-213ENST00000523824 YTHDC2Q9H6S0 1430 aaKnown RBP11.85□□□□□ -0.51
NSMCE2-213ENST00000523824 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
NSMCE2-213ENST00000523824 BAG6P46379 1132 aa11.84□□□□□ -0.51
NSMCE2-213ENST00000523824 USP32Q8NFA0 1604 aa11.84□□□□□ -0.51
NSMCE2-213ENST00000523824 SPATA31E1Q6ZUB1 1445 aa11.84□□□□□ -0.51
NSMCE2-213ENST00000523824 SBNO1A3KN83 1393 aa11.83□□□□□ -0.52
NSMCE2-213ENST00000523824 ARHGEF10O15013 1369 aa11.83□□□□□ -0.52
NSMCE2-213ENST00000523824 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
NSMCE2-213ENST00000523824 FAM83GA6ND36 823 aa11.83□□□□□ -0.52
NSMCE2-213ENST00000523824 SAFB2Q14151 953 aaKnown RBP eCLIP11.83□□□□□ -0.52
NSMCE2-213ENST00000523824 MPHOSPH9Q99550 1183 aa11.83□□□□□ -0.52
NSMCE2-213ENST00000523824 FMN2Q9NZ56 1722 aa11.83□□□□□ -0.52
NSMCE2-213ENST00000523824 DHX57Q6P158 1386 aaKnown RBP11.82□□□□□ -0.52
NSMCE2-213ENST00000523824 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
NSMCE2-213ENST00000523824 PMFBP1Q8TBY8 1022 aa11.82□□□□□ -0.52
NSMCE2-213ENST00000523824 C14orf93Q9H972 538 aaKnown RBP11.82□□□□□ -0.52
NSMCE2-213ENST00000523824 PIK3C2GO75747 1445 aa11.82□□□□□ -0.52
NSMCE2-213ENST00000523824 BRWD3Q6RI45 1802 aa11.81□□□□□ -0.52
NSMCE2-213ENST00000523824 CFAP70Q5T0N1 1121 aa11.81□□□□□ -0.52
NSMCE2-213ENST00000523824 PRAM1Q96QH2 718 aa11.81□□□□□ -0.52
NSMCE2-213ENST00000523824 BTG4Q9NY30 223 aa11.81□□□□□ -0.52
NSMCE2-213ENST00000523824 POGKQ9P215 609 aa11.81□□□□□ -0.52
NSMCE2-213ENST00000523824 KNDC1Q76NI1 1749 aa11.8□□□□□ -0.52
NSMCE2-213ENST00000523824 HRCP23327 699 aa11.8□□□□□ -0.52
NSMCE2-213ENST00000523824 NRXN1Q9ULB1 1477 aa11.8□□□□□ -0.52
NSMCE2-213ENST00000523824 EN1Q05925 392 aaPredicted RBP11.79□□□□□ -0.52
NSMCE2-213ENST00000523824 NWD2Q9ULI1 1742 aa11.78□□□□□ -0.52
NSMCE2-213ENST00000523824 PLCH1Q4KWH8 1693 aa11.78□□□□□ -0.52
NSMCE2-213ENST00000523824 FAM182BQ5T319 152 aa11.77□□□□□ -0.53
NSMCE2-213ENST00000523824 LRP5O75197 1615 aa11.77□□□□□ -0.53
NSMCE2-213ENST00000523824 GPRASP1Q5JY77 1395 aa11.77□□□□□ -0.53
NSMCE2-213ENST00000523824 IFT172Q9UG01 1749 aa11.77□□□□□ -0.53
NSMCE2-213ENST00000523824 R3HDM1Q15032 1099 aaKnown RBP11.76□□□□□ -0.53
NSMCE2-213ENST00000523824 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
NSMCE2-213ENST00000523824 RGPD8O14715 1765 aaPredicted RBP11.76□□□□□ -0.53
NSMCE2-213ENST00000523824 ANKARQ7Z5J8 1434 aa11.76□□□□□ -0.53
NSMCE2-213ENST00000523824 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
NSMCE2-213ENST00000523824 NGDNQ8NEJ9 315 aaKnown RBP11.75□□□□□ -0.53
NSMCE2-213ENST00000523824 SPATA31A5Q5VU36 1347 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms