RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 CARD14Q9BXL6 1004 aa28.22■■■□□ 2.11
SQLE-206ENST00000523430 ABCC11Q96J66 1382 aa28.22■■■□□ 2.11
SQLE-206ENST00000523430 PLEKHH1Q9ULM0 1364 aa28.22■■■□□ 2.11
SQLE-206ENST00000523430 BCANQ96GW7 911 aa28.21■■■□□ 2.11
SQLE-206ENST00000523430 CABP2Q9NPB3 220 aa28.21■■■□□ 2.11
SQLE-206ENST00000523430 SLC12A5Q9H2X9 1139 aa28.2■■■□□ 2.1
SQLE-206ENST00000523430 NPC1L1Q9UHC9 1359 aa28.2■■■□□ 2.1
SQLE-206ENST00000523430 PUS7Q96PZ0 661 aaKnown RBP28.19■■■□□ 2.1
SQLE-206ENST00000523430 PNISRQ8TF01 805 aaKnown RBP28.19■■■□□ 2.1
SQLE-206ENST00000523430 CPS1P31327 1500 aa28.18■■■□□ 2.1
SQLE-206ENST00000523430 TXNDC2Q86VQ3 553 aa28.18■■■□□ 2.1
SQLE-206ENST00000523430 TECPR2O15040 1411 aa28.17■■■□□ 2.1
SQLE-206ENST00000523430 NSD3Q9BZ95 1437 aa28.17■■■□□ 2.1
SQLE-206ENST00000523430 WAPLQ7Z5K2 1190 aa28.17■■■□□ 2.1
SQLE-206ENST00000523430 SRPK2P78362 688 aaKnown RBP28.15■■■□□ 2.1
SQLE-206ENST00000523430 MED14O60244 1454 aa28.14■■■□□ 2.1
SQLE-206ENST00000523430 USP32Q8NFA0 1604 aa28.14■■■□□ 2.1
SQLE-206ENST00000523430 EID1Q9Y6B2 187 aa28.14■■■□□ 2.1
SQLE-206ENST00000523430 ZNF142P52746 1687 aaPredicted RBP28.14■■■□□ 2.09
SQLE-206ENST00000523430 THEMISQ8N1K5 641 aaPredicted RBP28.12■■■□□ 2.09
SQLE-206ENST00000523430 ANKRD36BQ8N2N9 1353 aa28.12■■■□□ 2.09
SQLE-206ENST00000523430 ATAD2Q6PL18 1390 aa28.11■■■□□ 2.09
SQLE-206ENST00000523430 FAM135BQ49AJ0 1406 aa28.1■■■□□ 2.09
SQLE-206ENST00000523430 NINLQ9Y2I6 1382 aa28.1■■■□□ 2.09
SQLE-206ENST00000523430 PPP2R1AP30153 589 aa28.09■■■□□ 2.09
SQLE-206ENST00000523430 CDK19Q9BWU1 502 aa28.08■■■□□ 2.09
SQLE-206ENST00000523430 SLC26A8Q96RN1 970 aa28.07■■■□□ 2.08
SQLE-206ENST00000523430 ROBO2Q9HCK4 1378 aa28.07■■■□□ 2.08
SQLE-206ENST00000523430 PTPRUQ92729 1446 aa28.06■■■□□ 2.08
SQLE-206ENST00000523430 A0A1W2PP64 1363 aa28.06■■■□□ 2.08
SQLE-206ENST00000523430 ZBED9Q6R2W3 1325 aa28.06■■■□□ 2.08
SQLE-206ENST00000523430 DIP2AQ14689 1571 aa28.06■■■□□ 2.08
SQLE-206ENST00000523430 CD163L1Q9NR16 1453 aa28.05■■■□□ 2.08
SQLE-206ENST00000523430 SIRT1Q96EB6 747 aa28.02■■■□□ 2.08
SQLE-206ENST00000523430 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.99■■■□□ 2.07
SQLE-206ENST00000523430 ADGRB2O60241 1585 aa27.98■■■□□ 2.07
SQLE-206ENST00000523430 CGNL1Q0VF96 1302 aa27.98■■■□□ 2.07
SQLE-206ENST00000523430 TBX22Q9Y458 520 aa27.98■■■□□ 2.07
SQLE-206ENST00000523430 WASLO00401 505 aaPredicted RBP27.97■■■□□ 2.07
SQLE-206ENST00000523430 SENP3-EIF4A1A0A087X0R7 540 aa27.96■■■□□ 2.07
SQLE-206ENST00000523430 XRN1Q8IZH2 1706 aaKnown RBP27.96■■■□□ 2.07
SQLE-206ENST00000523430 BLMP54132 1417 aaPredicted RBP27.94■■■□□ 2.06
SQLE-206ENST00000523430 CABP1Q9NZU7 370 aa27.94■■■□□ 2.06
SQLE-206ENST00000523430 PTCH1Q13635 1447 aa27.94■■■□□ 2.06
SQLE-206ENST00000523430 ATP7BP35670 1465 aa27.94■■■□□ 2.06
SQLE-206ENST00000523430 TERF2IPQ9NYB0 399 aa27.93■■■□□ 2.06
SQLE-206ENST00000523430 NSD2O96028 1365 aa27.93■■■□□ 2.06
SQLE-206ENST00000523430 MORC1Q86VD1 984 aa27.92■■■□□ 2.06
SQLE-206ENST00000523430 AMOTL2Q9Y2J4 779 aa27.91■■■□□ 2.06
SQLE-206ENST00000523430 PPIP5K1Q6PFW1 1433 aa27.9■■■□□ 2.06
SQLE-206ENST00000523430 SETD1BQ9UPS6 1966 aaKnown RBP27.9■■■□□ 2.06
SQLE-206ENST00000523430 INSRP06213 1382 aa27.9■■■□□ 2.06
SQLE-206ENST00000523430 ANKRD26Q9UPS8 1709 aa27.89■■■□□ 2.06
SQLE-206ENST00000523430 TNNT2P45379 298 aaPredicted RBP27.88■■■□□ 2.05
SQLE-206ENST00000523430 HDGFL2Q7Z4V5 671 aaPredicted RBP27.88■■■□□ 2.05
SQLE-206ENST00000523430 KIF20BQ96Q89 1820 aa27.87■■■□□ 2.05
SQLE-206ENST00000523430 ANKLE2Q86XL3 938 aa27.87■■■□□ 2.05
SQLE-206ENST00000523430 CDC42BPGQ6DT37 1551 aa27.87■■■□□ 2.05
SQLE-206ENST00000523430 NUDT16Q96DE0 195 aaKnown RBP27.85■■■□□ 2.05
SQLE-206ENST00000523430 TOPAZ1Q8N9V7 1692 aa27.85■■■□□ 2.05
SQLE-206ENST00000523430 PRR36Q9H6K5 1346 aa27.85■■■□□ 2.05
SQLE-206ENST00000523430 NCKAP5LQ9HCH0 1330 aa27.85■■■□□ 2.05
SQLE-206ENST00000523430 ADAMTS8Q9UP79 889 aa27.84■■■□□ 2.05
SQLE-206ENST00000523430 CPSF1Q10570 1443 aaKnown RBP27.84■■■□□ 2.05
SQLE-206ENST00000523430 WDR43Q15061 677 aaKnown RBP eCLIP27.83■■■□□ 2.05
SQLE-206ENST00000523430 PIK3R4Q99570 1358 aa27.83■■■□□ 2.05
SQLE-206ENST00000523430 POLR3AO14802 1390 aaPredicted RBP27.82■■■□□ 2.04
SQLE-206ENST00000523430 GGNBP2Q9H3C7 697 aa27.82■■■□□ 2.04
SQLE-206ENST00000523430 SHPRHQ149N8 1683 aa27.82■■■□□ 2.04
SQLE-206ENST00000523430 ITSN1Q15811 1721 aa27.81■■■□□ 2.04
SQLE-206ENST00000523430 MON2Q7Z3U7 1717 aa27.81■■■□□ 2.04
SQLE-206ENST00000523430 AKAP12Q02952 1782 aa27.8■■■□□ 2.04
SQLE-206ENST00000523430 FYB1O15117 783 aa27.8■■■□□ 2.04
SQLE-206ENST00000523430 KCNA6P17658 529 aa27.79■■■□□ 2.04
SQLE-206ENST00000523430 CCDC61Q9Y6R9 512 aa27.79■■■□□ 2.04
SQLE-206ENST00000523430 CHD2O14647 1828 aaKnown RBP27.78■■■□□ 2.04
SQLE-206ENST00000523430 NPHP4O75161 1426 aaPredicted RBP27.77■■■□□ 2.04
SQLE-206ENST00000523430 SMG6Q86US8 1419 aaKnown RBP27.77■■■□□ 2.04
SQLE-206ENST00000523430 EDC4Q6P2E9 1401 aaKnown RBP27.76■■■□□ 2.03
SQLE-206ENST00000523430 NKTRP30414 1462 aaKnown RBP27.76■■■□□ 2.03
SQLE-206ENST00000523430 SALL2Q9Y467 1007 aaPredicted RBP27.76■■■□□ 2.03
SQLE-206ENST00000523430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.75■■■□□ 2.037e-8■■■■■ 27.2
SQLE-206ENST00000523430 NUTM2FA1L443 756 aa27.74■■■□□ 2.03
SQLE-206ENST00000523430 MTHFSP49914 203 aa27.74■■■□□ 2.03
SQLE-206ENST00000523430 SUPT16HQ9Y5B9 1047 aaKnown RBP27.74■■■□□ 2.03
SQLE-206ENST00000523430 NRKQ7Z2Y5 1582 aa27.72■■■□□ 2.03
SQLE-206ENST00000523430 NALCNQ8IZF0 1738 aa27.71■■■□□ 2.03
SQLE-206ENST00000523430 NUDCQ9Y266 331 aa27.7■■■□□ 2.03
SQLE-206ENST00000523430 FKBP8Q14318 412 aa27.68■■■□□ 2.02
SQLE-206ENST00000523430 CCDC146Q8IYE0 955 aa27.68■■■□□ 2.02
SQLE-206ENST00000523430 FMN2Q9NZ56 1722 aa27.67■■■□□ 2.02
SQLE-206ENST00000523430 COL3A1P02461 1466 aaPredicted RBP27.66■■■□□ 2.02
SQLE-206ENST00000523430 RGPD8O14715 1765 aaPredicted RBP27.66■■■□□ 2.02
SQLE-206ENST00000523430 NEFLP07196 543 aa27.66■■■□□ 2.02
SQLE-206ENST00000523430 NME9Q86XW9 330 aa27.66■■■□□ 2.02
SQLE-206ENST00000523430 CFAP53Q96M91 514 aa27.65■■■□□ 2.02
SQLE-206ENST00000523430 ACEP12821 1306 aa27.64■■■□□ 2.02
SQLE-206ENST00000523430 PLEKHG3A1L390 1219 aa27.64■■■□□ 2.01
SQLE-206ENST00000523430 NWD1Q149M9 1564 aa27.63■■■□□ 2.01
SQLE-206ENST00000523430 USP6P35125 1406 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms