RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 ABCC11Q96J66 1382 aa22.67■■□□□ 1.22
SREK1-212ENST00000522912 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
SREK1-212ENST00000522912 USP32Q8NFA0 1604 aa22.66■■□□□ 1.22
SREK1-212ENST00000522912 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
SREK1-212ENST00000522912 SRPK2P78362 688 aaKnown RBP22.65■■□□□ 1.22
SREK1-212ENST00000522912 FKBP8Q14318 412 aa22.64■■□□□ 1.22
SREK1-212ENST00000522912 WAPLQ7Z5K2 1190 aa22.64■■□□□ 1.22
SREK1-212ENST00000522912 ANKRD36BQ8N2N9 1353 aa22.64■■□□□ 1.22
SREK1-212ENST00000522912 PLEKHH1Q9ULM0 1364 aa22.64■■□□□ 1.22
SREK1-212ENST00000522912 LTKP29376 864 aa22.63■■□□□ 1.21
SREK1-212ENST00000522912 INSRP06213 1382 aa22.62■■□□□ 1.21
SREK1-212ENST00000522912 KNDC1Q76NI1 1749 aa22.62■■□□□ 1.21
SREK1-212ENST00000522912 BLMP54132 1417 aaPredicted RBP22.61■■□□□ 1.21
SREK1-212ENST00000522912 ADAMTS13Q76LX8 1427 aa22.61■■□□□ 1.21
SREK1-212ENST00000522912 ATAD2Q6PL18 1390 aa22.61■■□□□ 1.21
SREK1-212ENST00000522912 NINLQ9Y2I6 1382 aa22.61■■□□□ 1.21
SREK1-212ENST00000522912 CDK19Q9BWU1 502 aa22.6■■□□□ 1.21
SREK1-212ENST00000522912 BCANQ96GW7 911 aa22.6■■□□□ 1.21
SREK1-212ENST00000522912 NEFLP07196 543 aa22.59■■□□□ 1.21
SREK1-212ENST00000522912 PLEKHG1Q9ULL1 1385 aa22.59■■□□□ 1.21
SREK1-212ENST00000522912 SMG6Q86US8 1419 aaKnown RBP22.58■■□□□ 1.21
SREK1-212ENST00000522912 SLIT1O75093 1534 aa22.58■■□□□ 1.21
SREK1-212ENST00000522912 ARHGAP23Q9P227 1491 aa22.58■■□□□ 1.21
SREK1-212ENST00000522912 TXNDC2Q86VQ3 553 aa22.58■■□□□ 1.2
SREK1-212ENST00000522912 RIMS1Q86UR5 1692 aaKnown RBP22.57■■□□□ 1.2
SREK1-212ENST00000522912 TECPR2O15040 1411 aa22.57■■□□□ 1.2
SREK1-212ENST00000522912 ADAMTS8Q9UP79 889 aa22.57■■□□□ 1.2
SREK1-212ENST00000522912 A0A1W2PP64 1363 aa22.57■■□□□ 1.2
SREK1-212ENST00000522912 CGNL1Q0VF96 1302 aa22.57■■□□□ 1.2
SREK1-212ENST00000522912 CPS1P31327 1500 aa22.56■■□□□ 1.2
SREK1-212ENST00000522912 CD163L1Q9NR16 1453 aa22.56■■□□□ 1.2
SREK1-212ENST00000522912 MORC1Q86VD1 984 aa22.55■■□□□ 1.2
SREK1-212ENST00000522912 SIRT1Q96EB6 747 aa22.55■■□□□ 1.2
SREK1-212ENST00000522912 FAM135BQ49AJ0 1406 aa22.55■■□□□ 1.2
SREK1-212ENST00000522912 MED14O60244 1454 aa22.54■■□□□ 1.2
SREK1-212ENST00000522912 NUDCQ9Y266 331 aa22.54■■□□□ 1.2
SREK1-212ENST00000522912 WDR43Q15061 677 aaKnown RBP eCLIP22.53■■□□□ 1.26e-7■■□□□ 12.2
SREK1-212ENST00000522912 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
SREK1-212ENST00000522912 THEMISQ8N1K5 641 aaPredicted RBP22.52■■□□□ 1.19
SREK1-212ENST00000522912 SALL2Q9Y467 1007 aaPredicted RBP22.52■■□□□ 1.19
SREK1-212ENST00000522912 NSD2O96028 1365 aa22.51■■□□□ 1.19
SREK1-212ENST00000522912 ADAMTSL3P82987 1691 aa22.51■■□□□ 1.19
SREK1-212ENST00000522912 TERF2IPQ9NYB0 399 aa22.51■■□□□ 1.19
SREK1-212ENST00000522912 TNNT2P45379 298 aaPredicted RBP22.5■■□□□ 1.19
SREK1-212ENST00000522912 CABP1Q9NZU7 370 aa22.5■■□□□ 1.19
SREK1-212ENST00000522912 WASLO00401 505 aaPredicted RBP22.49■■□□□ 1.19
SREK1-212ENST00000522912 POLR3AO14802 1390 aaPredicted RBP22.49■■□□□ 1.19
SREK1-212ENST00000522912 ROBO2Q9HCK4 1378 aa22.49■■□□□ 1.19
SREK1-212ENST00000522912 SLC26A8Q96RN1 970 aa22.48■■□□□ 1.19
SREK1-212ENST00000522912 CEP170BQ9Y4F5 1589 aaPredicted RBP22.48■■□□□ 1.19
SREK1-212ENST00000522912 PTPRUQ92729 1446 aa22.47■■□□□ 1.19
SREK1-212ENST00000522912 ANKRD26Q9UPS8 1709 aa22.46■■□□□ 1.19
SREK1-212ENST00000522912 HDGFL2Q7Z4V5 671 aaPredicted RBP22.46■■□□□ 1.19
SREK1-212ENST00000522912 SHPRHQ149N8 1683 aa22.45■■□□□ 1.19
SREK1-212ENST00000522912 IRX6P78412 446 aaPredicted RBP22.45■■□□□ 1.18
SREK1-212ENST00000522912 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.45■■□□□ 1.18
SREK1-212ENST00000522912 TBX22Q9Y458 520 aa22.44■■□□□ 1.18
SREK1-212ENST00000522912 ATP7BP35670 1465 aa22.44■■□□□ 1.18
SREK1-212ENST00000522912 PDE3BQ13370 1112 aa22.43■■□□□ 1.18
SREK1-212ENST00000522912 FYB1O15117 783 aa22.43■■□□□ 1.18
SREK1-212ENST00000522912 KIF20BQ96Q89 1820 aa22.43■■□□□ 1.18
SREK1-212ENST00000522912 MTHFSP49914 203 aa22.42■■□□□ 1.18
SREK1-212ENST00000522912 GGNBP2Q9H3C7 697 aa22.42■■□□□ 1.18
SREK1-212ENST00000522912 DIP2AQ14689 1571 aa22.41■■□□□ 1.18
SREK1-212ENST00000522912 NUDT16Q96DE0 195 aaKnown RBP22.41■■□□□ 1.18
SREK1-212ENST00000522912 ADGRB2O60241 1585 aa22.41■■□□□ 1.18
SREK1-212ENST00000522912 PPIP5K1Q6PFW1 1433 aa22.4■■□□□ 1.18
SREK1-212ENST00000522912 CDCA7LQ96GN5 454 aa22.4■■□□□ 1.18
SREK1-212ENST00000522912 ZNF142P52746 1687 aaPredicted RBP22.4■■□□□ 1.18
SREK1-212ENST00000522912 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.17
SREK1-212ENST00000522912 AMOTL2Q9Y2J4 779 aa22.39■■□□□ 1.17
SREK1-212ENST00000522912 CPSF1Q10570 1443 aaKnown RBP22.39■■□□□ 1.17
SREK1-212ENST00000522912 SETD1BQ9UPS6 1966 aaKnown RBP22.38■■□□□ 1.17
SREK1-212ENST00000522912 RNF123Q5XPI4 1314 aa22.37■■□□□ 1.17
SREK1-212ENST00000522912 NCKAP5LQ9HCH0 1330 aa22.37■■□□□ 1.17
SREK1-212ENST00000522912 PRR36Q9H6K5 1346 aa22.37■■□□□ 1.17
SREK1-212ENST00000522912 CDC42BPGQ6DT37 1551 aa22.36■■□□□ 1.17
SREK1-212ENST00000522912 CCDC61Q9Y6R9 512 aa22.36■■□□□ 1.17
SREK1-212ENST00000522912 AKAP12Q02952 1782 aa22.35■■□□□ 1.17
SREK1-212ENST00000522912 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
SREK1-212ENST00000522912 PTCH1Q13635 1447 aa22.34■■□□□ 1.17
SREK1-212ENST00000522912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.34■■□□□ 1.17
SREK1-212ENST00000522912 CFAP53Q96M91 514 aa22.34■■□□□ 1.17
SREK1-212ENST00000522912 ZNF521Q96K83 1311 aa22.34■■□□□ 1.17
SREK1-212ENST00000522912 MON2Q7Z3U7 1717 aa22.34■■□□□ 1.17
SREK1-212ENST00000522912 ITSN1Q15811 1721 aa22.33■■□□□ 1.17
SREK1-212ENST00000522912 APAF1O14727 1248 aa22.33■■□□□ 1.16
SREK1-212ENST00000522912 ERICH6BQ5W0A0 696 aa22.33■■□□□ 1.16
SREK1-212ENST00000522912 EDC4Q6P2E9 1401 aaKnown RBP22.33■■□□□ 1.16
SREK1-212ENST00000522912 TOPAZ1Q8N9V7 1692 aa22.32■■□□□ 1.16
SREK1-212ENST00000522912 ANKLE2Q86XL3 938 aa22.29■■□□□ 1.16
SREK1-212ENST00000522912 COL3A1P02461 1466 aaPredicted RBP22.29■■□□□ 1.16
SREK1-212ENST00000522912 RCAN3Q9UKA8 241 aa22.28■■□□□ 1.16
SREK1-212ENST00000522912 PIK3R4Q99570 1358 aa22.27■■□□□ 1.16
SREK1-212ENST00000522912 NUTM2FA1L443 756 aa22.26■■□□□ 1.15
SREK1-212ENST00000522912 NME9Q86XW9 330 aa22.26■■□□□ 1.15
SREK1-212ENST00000522912 KCNA6P17658 529 aa22.25■■□□□ 1.15
SREK1-212ENST00000522912 GOLGA2Q08379 1002 aa22.25■■□□□ 1.15
SREK1-212ENST00000522912 RUNDC1Q96C34 613 aa22.25■■□□□ 1.15
SREK1-212ENST00000522912 ZNF692Q9BU19 519 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms