RNA–Protein interactions for RNA: ENST00000521129.1

MCPH1-204, Transcript of microcephalin 1, humanhuman

TSL 2

Gene MCPH1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-204ENST00000521129 PIK3C2GO75747 1445 aa16.56■□□□□ 0.24
MCPH1-204ENST00000521129 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
MCPH1-204ENST00000521129 C8orf37Q96NL8 207 aa16.56■□□□□ 0.24
MCPH1-204ENST00000521129 KNDC1Q76NI1 1749 aa16.56■□□□□ 0.24
MCPH1-204ENST00000521129 ABCC11Q96J66 1382 aa16.55■□□□□ 0.24
MCPH1-204ENST00000521129 RGL3Q3MIN7 710 aa16.55■□□□□ 0.24
MCPH1-204ENST00000521129 COL22A1Q8NFW1 1626 aaPredicted RBP16.55■□□□□ 0.24
MCPH1-204ENST00000521129 TRIM26Q12899 539 aaPredicted RBP16.54■□□□□ 0.24
MCPH1-204ENST00000521129 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
MCPH1-204ENST00000521129 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
MCPH1-204ENST00000521129 PXDNQ92626 1479 aa16.52■□□□□ 0.23
MCPH1-204ENST00000521129 RBM6P78332 1123 aaKnown RBP16.51■□□□□ 0.23
MCPH1-204ENST00000521129 NGLY1Q96IV0 654 aa16.51■□□□□ 0.23
MCPH1-204ENST00000521129 QTRT2Q9H974 415 aaKnown RBP16.51■□□□□ 0.23
MCPH1-204ENST00000521129 MYOM2P54296 1465 aa16.5■□□□□ 0.23
MCPH1-204ENST00000521129 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
MCPH1-204ENST00000521129 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
MCPH1-204ENST00000521129 ESCO1Q5FWF5 840 aa16.5■□□□□ 0.23
MCPH1-204ENST00000521129 WAPLQ7Z5K2 1190 aa16.5■□□□□ 0.23
MCPH1-204ENST00000521129 STK26Q9P289 416 aa16.5■□□□□ 0.23
MCPH1-204ENST00000521129 RGS12O14924 1447 aa16.5■□□□□ 0.23
MCPH1-204ENST00000521129 YTHDC2Q9H6S0 1430 aaKnown RBP16.5■□□□□ 0.23
MCPH1-204ENST00000521129 TMEM132EQ6IEE7 984 aa16.49■□□□□ 0.23
MCPH1-204ENST00000521129 SIRT1Q96EB6 747 aa16.49■□□□□ 0.23
MCPH1-204ENST00000521129 PLEKHH1Q9ULM0 1364 aa16.49■□□□□ 0.23
MCPH1-204ENST00000521129 FMN2Q9NZ56 1722 aa16.48■□□□□ 0.23
MCPH1-204ENST00000521129 FNBP4Q8N3X1 1017 aaPredicted RBP16.48■□□□□ 0.23
MCPH1-204ENST00000521129 C14orf93Q9H972 538 aaKnown RBP16.47■□□□□ 0.23
MCPH1-204ENST00000521129 FOXO3O43524 673 aa16.46■□□□□ 0.23
MCPH1-204ENST00000521129 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
MCPH1-204ENST00000521129 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
MCPH1-204ENST00000521129 USP21Q9UK80 565 aa16.45■□□□□ 0.22
MCPH1-204ENST00000521129 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
MCPH1-204ENST00000521129 ATRNO75882 1429 aa16.44■□□□□ 0.22
MCPH1-204ENST00000521129 DHX57Q6P158 1386 aaKnown RBP16.43■□□□□ 0.22
MCPH1-204ENST00000521129 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
MCPH1-204ENST00000521129 NUTM2FA1L443 756 aa16.43■□□□□ 0.22
MCPH1-204ENST00000521129 XPCQ01831 940 aaPredicted RBP16.42■□□□□ 0.22
MCPH1-204ENST00000521129 CFAP70Q5T0N1 1121 aa16.42■□□□□ 0.22
MCPH1-204ENST00000521129 DLC1Q96QB1 1528 aa16.41■□□□□ 0.22
MCPH1-204ENST00000521129 EP400Q96L91 3159 aa16.41■□□□□ 0.22
MCPH1-204ENST00000521129 SPATA31A3Q5VYP0 1347 aa16.41■□□□□ 0.22
MCPH1-204ENST00000521129 BCL9LQ86UU0 1499 aa16.41■□□□□ 0.22
MCPH1-204ENST00000521129 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.39■□□□□ 0.21
MCPH1-204ENST00000521129 RGPD8O14715 1765 aaPredicted RBP16.39■□□□□ 0.21
MCPH1-204ENST00000521129 ATAD2Q6PL18 1390 aa16.38■□□□□ 0.21
MCPH1-204ENST00000521129 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
MCPH1-204ENST00000521129 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
MCPH1-204ENST00000521129 PRAM1Q96QH2 718 aa16.37■□□□□ 0.21
MCPH1-204ENST00000521129 PHF8Q9UPP1 1060 aa16.37■□□□□ 0.21
MCPH1-204ENST00000521129 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
MCPH1-204ENST00000521129 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
MCPH1-204ENST00000521129 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
MCPH1-204ENST00000521129 SLIT2O94813 1529 aa16.36■□□□□ 0.21
MCPH1-204ENST00000521129 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
MCPH1-204ENST00000521129 USP32Q8NFA0 1604 aa16.36■□□□□ 0.21
MCPH1-204ENST00000521129 HRCP23327 699 aa16.35■□□□□ 0.21
MCPH1-204ENST00000521129 PSME1Q06323 249 aa16.35■□□□□ 0.21
MCPH1-204ENST00000521129 SBNO1A3KN83 1393 aa16.35■□□□□ 0.21
MCPH1-204ENST00000521129 GJD4Q96KN9 370 aaPredicted RBP16.34■□□□□ 0.21
MCPH1-204ENST00000521129 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
MCPH1-204ENST00000521129 SRCAPQ6ZRS2 3230 aa16.34■□□□□ 0.21
MCPH1-204ENST00000521129 SAFB2Q14151 953 aaKnown RBP eCLIP16.33■□□□□ 0.2
MCPH1-204ENST00000521129 UNC5CLQ8IV45 518 aa16.33■□□□□ 0.2
MCPH1-204ENST00000521129 POGKQ9P215 609 aa16.33■□□□□ 0.2
MCPH1-204ENST00000521129 ARHGEF10O15013 1369 aa16.32■□□□□ 0.2
MCPH1-204ENST00000521129 ABCA3Q99758 1704 aa16.31■□□□□ 0.2
MCPH1-204ENST00000521129 GLI3P10071 1580 aa16.3■□□□□ 0.2
MCPH1-204ENST00000521129 RALGAPBQ86X10 1494 aa16.3■□□□□ 0.2
MCPH1-204ENST00000521129 EIF3AQ14152 1382 aaKnown RBP16.3■□□□□ 0.2
MCPH1-204ENST00000521129 DCAF11Q8TEB1 546 aa16.3■□□□□ 0.2
MCPH1-204ENST00000521129 NWD2Q9ULI1 1742 aa16.3■□□□□ 0.2
MCPH1-204ENST00000521129 CCDC125Q86Z20 511 aa16.29■□□□□ 0.2
MCPH1-204ENST00000521129 TRAK1Q9UPV9 953 aa16.29■□□□□ 0.2
MCPH1-204ENST00000521129 TRPM3Q9HCF6 1732 aaPredicted RBP16.28■□□□□ 0.2
MCPH1-204ENST00000521129 PLCH1Q4KWH8 1693 aa16.28■□□□□ 0.2
MCPH1-204ENST00000521129 TULP4Q9NRJ4 1543 aa16.28■□□□□ 0.2
MCPH1-204ENST00000521129 HAP1P54257 671 aaPredicted RBP16.27■□□□□ 0.2
MCPH1-204ENST00000521129 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
MCPH1-204ENST00000521129 CABLES1Q8TDN4 633 aa16.27■□□□□ 0.2
MCPH1-204ENST00000521129 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.2
MCPH1-204ENST00000521129 VPS72Q15906 364 aa16.26■□□□□ 0.19
MCPH1-204ENST00000521129 ALS2Q96Q42 1657 aa16.26■□□□□ 0.19
MCPH1-204ENST00000521129 MINK1Q8N4C8 1332 aaPredicted RBP16.25■□□□□ 0.19
MCPH1-204ENST00000521129 PRR36Q9H6K5 1346 aa16.25■□□□□ 0.19
MCPH1-204ENST00000521129 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
MCPH1-204ENST00000521129 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
MCPH1-204ENST00000521129 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
MCPH1-204ENST00000521129 GPRASP1Q5JY77 1395 aa16.25■□□□□ 0.19
MCPH1-204ENST00000521129 BRWD3Q6RI45 1802 aa16.24■□□□□ 0.19
MCPH1-204ENST00000521129 LMOD2Q6P5Q4 547 aa16.24■□□□□ 0.19
MCPH1-204ENST00000521129 ONECUT3O60422 494 aaPredicted RBP16.23■□□□□ 0.19
MCPH1-204ENST00000521129 FAM83GA6ND36 823 aa16.22■□□□□ 0.19
MCPH1-204ENST00000521129 ITSN1Q15811 1721 aa16.22■□□□□ 0.19
MCPH1-204ENST00000521129 NRAPQ86VF7 1730 aa16.21■□□□□ 0.19
MCPH1-204ENST00000521129 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
MCPH1-204ENST00000521129 COL14A1Q05707 1796 aaKnown RBP16.21■□□□□ 0.18
MCPH1-204ENST00000521129 BLMP54132 1417 aaPredicted RBP16.2■□□□□ 0.18
MCPH1-204ENST00000521129 CRYBG1Q9Y4K1 1723 aa16.2■□□□□ 0.18
MCPH1-204ENST00000521129 SEPT12Q8IYM1 358 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms