RNA–Protein interactions for RNA: ENST00000521129.1

MCPH1-204, Transcript of microcephalin 1, humanhuman

TSL 2

Gene MCPH1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-204ENST00000521129 NISCHQ9Y2I1 1504 aa27.93■■■□□ 2.06
MCPH1-204ENST00000521129 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
MCPH1-204ENST00000521129 ABCC9O60706 1549 aa25■■□□□ 1.59
MCPH1-204ENST00000521129 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
MCPH1-204ENST00000521129 NACADO15069 1562 aa23.71■■□□□ 1.39
MCPH1-204ENST00000521129 DCAF8L2P0C7V8 631 aa23.45■■□□□ 1.34
MCPH1-204ENST00000521129 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
MCPH1-204ENST00000521129 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
MCPH1-204ENST00000521129 UNC13AQ9UPW8 1703 aa23.32■■□□□ 1.32
MCPH1-204ENST00000521129 PABPN1Q86U42 306 aaKnown RBP eCLIP23.26■■□□□ 1.31
MCPH1-204ENST00000521129 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
MCPH1-204ENST00000521129 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
MCPH1-204ENST00000521129 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
MCPH1-204ENST00000521129 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
MCPH1-204ENST00000521129 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
MCPH1-204ENST00000521129 CC2D2AQ9P2K1 1620 aa22.62■■□□□ 1.21
MCPH1-204ENST00000521129 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
MCPH1-204ENST00000521129 CECR2Q9BXF3 1484 aa22.55■■□□□ 1.2
MCPH1-204ENST00000521129 NCAPD3P42695 1498 aa21.89■■□□□ 1.09
MCPH1-204ENST00000521129 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
MCPH1-204ENST00000521129 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
MCPH1-204ENST00000521129 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
MCPH1-204ENST00000521129 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
MCPH1-204ENST00000521129 BAZ1AQ9NRL2 1556 aaPredicted RBP21.69■■□□□ 1.06
MCPH1-204ENST00000521129 CUX2O14529 1486 aa21.62■■□□□ 1.05
MCPH1-204ENST00000521129 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
MCPH1-204ENST00000521129 ERCC6Q03468 1493 aa21.6■■□□□ 1.05
MCPH1-204ENST00000521129 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
MCPH1-204ENST00000521129 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
MCPH1-204ENST00000521129 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
MCPH1-204ENST00000521129 NESP48681 1621 aa21.49■■□□□ 1.03
MCPH1-204ENST00000521129 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
MCPH1-204ENST00000521129 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
MCPH1-204ENST00000521129 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
MCPH1-204ENST00000521129 WIZO95785 1651 aa21.24■□□□□ 0.99
MCPH1-204ENST00000521129 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
MCPH1-204ENST00000521129 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
MCPH1-204ENST00000521129 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
MCPH1-204ENST00000521129 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
MCPH1-204ENST00000521129 WDR62O43379 1518 aa21.04■□□□□ 0.96
MCPH1-204ENST00000521129 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
MCPH1-204ENST00000521129 CFTRP13569 1480 aa20.98■□□□□ 0.95
MCPH1-204ENST00000521129 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
MCPH1-204ENST00000521129 FANCD2Q9BXW9 1451 aa20.95■□□□□ 0.94
MCPH1-204ENST00000521129 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
MCPH1-204ENST00000521129 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
MCPH1-204ENST00000521129 CCDC88BA6NC98 1476 aa20.74■□□□□ 0.91
MCPH1-204ENST00000521129 OSCARQ8IYS5 282 aa20.58■□□□□ 0.89
MCPH1-204ENST00000521129 IFT140Q96RY7 1462 aa20.57■□□□□ 0.88
MCPH1-204ENST00000521129 TOPBP1Q92547 1522 aa20.56■□□□□ 0.88
MCPH1-204ENST00000521129 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
MCPH1-204ENST00000521129 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
MCPH1-204ENST00000521129 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
MCPH1-204ENST00000521129 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
MCPH1-204ENST00000521129 EIF4G3O43432 1585 aaKnown RBP20.41■□□□□ 0.86
MCPH1-204ENST00000521129 TARBP1Q13395 1621 aaKnown RBP20.4■□□□□ 0.86
MCPH1-204ENST00000521129 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
MCPH1-204ENST00000521129 RIMBP3CA6NJZ7 1639 aa20.32■□□□□ 0.84
MCPH1-204ENST00000521129 RIMBP3BA6NNM3 1639 aa20.32■□□□□ 0.84
MCPH1-204ENST00000521129 RIMBP3Q9UFD9 1639 aa20.32■□□□□ 0.84
MCPH1-204ENST00000521129 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
MCPH1-204ENST00000521129 ARHGEF11O15085 1522 aa20.27■□□□□ 0.83
MCPH1-204ENST00000521129 CHD1O14646 1710 aa20.25■□□□□ 0.83
MCPH1-204ENST00000521129 SOGA1O94964 1423 aa20.25■□□□□ 0.83
MCPH1-204ENST00000521129 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
MCPH1-204ENST00000521129 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
MCPH1-204ENST00000521129 FGD5Q6ZNL6 1462 aa20.21■□□□□ 0.83
MCPH1-204ENST00000521129 CUX1P39880 1505 aa20.21■□□□□ 0.83
MCPH1-204ENST00000521129 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
MCPH1-204ENST00000521129 FBLN2P98095 1184 aa20.13■□□□□ 0.81
MCPH1-204ENST00000521129 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
MCPH1-204ENST00000521129 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
MCPH1-204ENST00000521129 GRIN2BQ13224 1484 aa20.09■□□□□ 0.81
MCPH1-204ENST00000521129 CYB5RLQ6IPT4 315 aa20.07■□□□□ 0.8
MCPH1-204ENST00000521129 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
MCPH1-204ENST00000521129 SUPT5HO00267 1087 aaKnown RBP20.05■□□□□ 0.8
MCPH1-204ENST00000521129 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
MCPH1-204ENST00000521129 SYNJ2O15056 1496 aa20.03■□□□□ 0.8
MCPH1-204ENST00000521129 SYNJ1O43426 1573 aa20.03■□□□□ 0.8
MCPH1-204ENST00000521129 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
MCPH1-204ENST00000521129 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.79
MCPH1-204ENST00000521129 GAPVD1Q14C86 1478 aa20.01■□□□□ 0.79
MCPH1-204ENST00000521129 PBRM1Q86U86 1689 aa20■□□□□ 0.79
MCPH1-204ENST00000521129 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
MCPH1-204ENST00000521129 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
MCPH1-204ENST00000521129 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
MCPH1-204ENST00000521129 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
MCPH1-204ENST00000521129 GRIN2AQ12879 1464 aa19.83■□□□□ 0.76
MCPH1-204ENST00000521129 ADAMTS12P58397 1594 aa19.83■□□□□ 0.76
MCPH1-204ENST00000521129 TRHP20396 242 aaPredicted RBP19.82■□□□□ 0.76
MCPH1-204ENST00000521129 NUP160Q12769 1436 aa19.78■□□□□ 0.76
MCPH1-204ENST00000521129 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
MCPH1-204ENST00000521129 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
MCPH1-204ENST00000521129 CEP170Q5SW79 1584 aa19.75■□□□□ 0.75
MCPH1-204ENST00000521129 SHROOM2Q13796 1616 aa19.7■□□□□ 0.74
MCPH1-204ENST00000521129 ERCC6L2Q5T890 1561 aa19.7■□□□□ 0.74
MCPH1-204ENST00000521129 PRG4Q92954 1404 aaPredicted RBP19.55■□□□□ 0.72
MCPH1-204ENST00000521129 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
MCPH1-204ENST00000521129 JPH4Q96JJ6 628 aa19.53■□□□□ 0.72
MCPH1-204ENST00000521129 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms