RNA–Protein interactions for RNA: ENST00000519138.1

MCM4-206, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-206ENST00000519138 KDM2AQ9Y2K7 1162 aa18.49■□□□□ 0.55
MCM4-206ENST00000519138 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
MCM4-206ENST00000519138 NRXN1Q9ULB1 1477 aa18.48■□□□□ 0.55
MCM4-206ENST00000519138 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
MCM4-206ENST00000519138 MYOM2P54296 1465 aa18.47■□□□□ 0.55
MCM4-206ENST00000519138 TECPR2O15040 1411 aa18.47■□□□□ 0.55
MCM4-206ENST00000519138 SPATA31A6Q5VVP1 1343 aa18.47■□□□□ 0.55
MCM4-206ENST00000519138 XPCQ01831 940 aaPredicted RBP18.46■□□□□ 0.55
MCM4-206ENST00000519138 SAFB2Q14151 953 aaKnown RBP eCLIP18.46■□□□□ 0.55
MCM4-206ENST00000519138 C14orf93Q9H972 538 aaKnown RBP18.46■□□□□ 0.55
MCM4-206ENST00000519138 LAMC1P11047 1609 aa18.45■□□□□ 0.54
MCM4-206ENST00000519138 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
MCM4-206ENST00000519138 FMN2Q9NZ56 1722 aa18.45■□□□□ 0.54
MCM4-206ENST00000519138 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
MCM4-206ENST00000519138 PNPLA6Q8IY17 1366 aa18.44■□□□□ 0.54
MCM4-206ENST00000519138 ESCO1Q5FWF5 840 aa18.44■□□□□ 0.54
MCM4-206ENST00000519138 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
MCM4-206ENST00000519138 LRRC59Q96AG4 307 aaKnown RBP18.43■□□□□ 0.54
MCM4-206ENST00000519138 ADAMTS2O95450 1211 aa18.4■□□□□ 0.54
MCM4-206ENST00000519138 PRAM1Q96QH2 718 aa18.4■□□□□ 0.54
MCM4-206ENST00000519138 SOS2Q07890 1332 aaPredicted RBP18.4■□□□□ 0.54
MCM4-206ENST00000519138 DHX57Q6P158 1386 aaKnown RBP18.4■□□□□ 0.54
MCM4-206ENST00000519138 ADGRB1O14514 1584 aa18.39■□□□□ 0.53
MCM4-206ENST00000519138 FOXO3O43524 673 aa18.39■□□□□ 0.53
MCM4-206ENST00000519138 HRCP23327 699 aa18.39■□□□□ 0.53
MCM4-206ENST00000519138 C8orf37Q96NL8 207 aa18.39■□□□□ 0.53
MCM4-206ENST00000519138 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
MCM4-206ENST00000519138 AFF2P51816 1311 aa18.38■□□□□ 0.53
MCM4-206ENST00000519138 PXDNQ92626 1479 aa18.38■□□□□ 0.53
MCM4-206ENST00000519138 HIRIP3Q9BW71 556 aaPredicted RBP18.36■□□□□ 0.53
MCM4-206ENST00000519138 USP32Q8NFA0 1604 aa18.35■□□□□ 0.53
MCM4-206ENST00000519138 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
MCM4-206ENST00000519138 ZNF772Q68DY9 489 aaPredicted RBP18.34■□□□□ 0.53
MCM4-206ENST00000519138 POGKQ9P215 609 aa18.34■□□□□ 0.53
MCM4-206ENST00000519138 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
MCM4-206ENST00000519138 NPHP3Q7Z494 1330 aa18.33■□□□□ 0.53
MCM4-206ENST00000519138 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.53
MCM4-206ENST00000519138 ARHGEF28Q8N1W1 1705 aaKnown RBP18.33■□□□□ 0.52
MCM4-206ENST00000519138 KIF1AQ12756 1690 aa18.33■□□□□ 0.52
MCM4-206ENST00000519138 DLC1Q96QB1 1528 aa18.33■□□□□ 0.52
MCM4-206ENST00000519138 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
MCM4-206ENST00000519138 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
MCM4-206ENST00000519138 NGLY1Q96IV0 654 aa18.3■□□□□ 0.52
MCM4-206ENST00000519138 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
MCM4-206ENST00000519138 RXRBP28702 533 aa18.28■□□□□ 0.52
MCM4-206ENST00000519138 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
MCM4-206ENST00000519138 PHF8Q9UPP1 1060 aa18.28■□□□□ 0.52
MCM4-206ENST00000519138 ADGRB2O60241 1585 aa18.28■□□□□ 0.52
MCM4-206ENST00000519138 SIN3AQ96ST3 1273 aa18.27■□□□□ 0.52
MCM4-206ENST00000519138 QTRT2Q9H974 415 aaKnown RBP18.27■□□□□ 0.52
MCM4-206ENST00000519138 PRR36Q9H6K5 1346 aa18.26■□□□□ 0.51
MCM4-206ENST00000519138 NBPF1Q3BBV0 1214 aa18.26■□□□□ 0.51
MCM4-206ENST00000519138 SPATA31A3Q5VYP0 1347 aa18.24■□□□□ 0.51
MCM4-206ENST00000519138 CABLES1Q8TDN4 633 aa18.24■□□□□ 0.51
MCM4-206ENST00000519138 RGS12O14924 1447 aa18.23■□□□□ 0.51
MCM4-206ENST00000519138 ABCA3Q99758 1704 aa18.23■□□□□ 0.51
MCM4-206ENST00000519138 LMOD2Q6P5Q4 547 aa18.23■□□□□ 0.51
MCM4-206ENST00000519138 USP21Q9UK80 565 aa18.23■□□□□ 0.51
MCM4-206ENST00000519138 KIAA1210Q9ULL0 1709 aa18.23■□□□□ 0.51
MCM4-206ENST00000519138 NEUROD1Q13562 356 aa18.22■□□□□ 0.51
MCM4-206ENST00000519138 TRPM3Q9HCF6 1732 aaPredicted RBP18.22■□□□□ 0.51
MCM4-206ENST00000519138 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.51
MCM4-206ENST00000519138 TULP4Q9NRJ4 1543 aa18.21■□□□□ 0.51
MCM4-206ENST00000519138 TNS3Q68CZ2 1445 aa18.21■□□□□ 0.51
MCM4-206ENST00000519138 PSME1Q06323 249 aa18.2■□□□□ 0.5
MCM4-206ENST00000519138 ANKARQ7Z5J8 1434 aa18.2■□□□□ 0.5
MCM4-206ENST00000519138 RBM6P78332 1123 aaKnown RBP18.19■□□□□ 0.5
MCM4-206ENST00000519138 L3MBTL2Q969R5 705 aa18.19■□□□□ 0.5
MCM4-206ENST00000519138 FNBP4Q8N3X1 1017 aaPredicted RBP18.18■□□□□ 0.5
MCM4-206ENST00000519138 STAC3Q96MF2 364 aa18.18■□□□□ 0.5
MCM4-206ENST00000519138 BCL9LQ86UU0 1499 aa18.18■□□□□ 0.5
MCM4-206ENST00000519138 ATRNO75882 1429 aa18.17■□□□□ 0.5
MCM4-206ENST00000519138 UPF1Q92900 1129 aaKnown RBP eCLIP18.17■□□□□ 0.5
MCM4-206ENST00000519138 ALS2Q96Q42 1657 aa18.17■□□□□ 0.5
MCM4-206ENST00000519138 ITSN1Q15811 1721 aa18.17■□□□□ 0.5
MCM4-206ENST00000519138 PLCH1Q4KWH8 1693 aa18.16■□□□□ 0.5
MCM4-206ENST00000519138 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
MCM4-206ENST00000519138 QRICH2Q9H0J4 1663 aa18.15■□□□□ 0.5
MCM4-206ENST00000519138 ATP7BP35670 1465 aa18.15■□□□□ 0.5
MCM4-206ENST00000519138 HAP1P54257 671 aaPredicted RBP18.15■□□□□ 0.5
MCM4-206ENST00000519138 CDK19Q9BWU1 502 aa18.15■□□□□ 0.5
MCM4-206ENST00000519138 TRPC5Q9UL62 973 aaPredicted RBP18.15■□□□□ 0.5
MCM4-206ENST00000519138 SBNO1A3KN83 1393 aa18.15■□□□□ 0.5
MCM4-206ENST00000519138 TRPM1Q7Z4N2 1603 aa18.14■□□□□ 0.49
MCM4-206ENST00000519138 NUDT16Q96DE0 195 aaKnown RBP18.14■□□□□ 0.49
MCM4-206ENST00000519138 TOPAZ1Q8N9V7 1692 aa18.14■□□□□ 0.49
MCM4-206ENST00000519138 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.14■□□□□ 0.49
MCM4-206ENST00000519138 NGDNQ8NEJ9 315 aaKnown RBP18.13■□□□□ 0.49
MCM4-206ENST00000519138 CRYBG1Q9Y4K1 1723 aa18.12■□□□□ 0.49
MCM4-206ENST00000519138 PAK3O75914 559 aaPredicted RBP18.12■□□□□ 0.49
MCM4-206ENST00000519138 SLIT2O94813 1529 aa18.12■□□□□ 0.49
MCM4-206ENST00000519138 BRWD3Q6RI45 1802 aa18.12■□□□□ 0.49
MCM4-206ENST00000519138 EIF3AQ14152 1382 aaKnown RBP18.11■□□□□ 0.49
MCM4-206ENST00000519138 GLI3P10071 1580 aa18.11■□□□□ 0.49
MCM4-206ENST00000519138 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
MCM4-206ENST00000519138 ARHGEF10O15013 1369 aa18.09■□□□□ 0.49
MCM4-206ENST00000519138 NUTM2GQ5VZR2 741 aa18.09■□□□□ 0.49
MCM4-206ENST00000519138 UNC5CLQ8IV45 518 aa18.08■□□□□ 0.48
MCM4-206ENST00000519138 CABP2Q9NPB3 220 aa18.08■□□□□ 0.48
MCM4-206ENST00000519138 RALGAPBQ86X10 1494 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms