RNA–Protein interactions for RNA: ENST00000519138.1

MCM4-206, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-206ENST00000519138 NISCHQ9Y2I1 1504 aa31.15■■■□□ 2.58
MCM4-206ENST00000519138 CCDC180Q9P1Z9 1646 aa27.82■■■□□ 2.04
MCM4-206ENST00000519138 ABCC9O60706 1549 aa27.72■■■□□ 2.03
MCM4-206ENST00000519138 RB1CC1Q8TDY2 1594 aa26.36■■□□□ 1.81
MCM4-206ENST00000519138 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
MCM4-206ENST00000519138 NACADO15069 1562 aa26.21■■□□□ 1.79
MCM4-206ENST00000519138 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
MCM4-206ENST00000519138 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
MCM4-206ENST00000519138 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.73
MCM4-206ENST00000519138 MYO15BQ96JP2 1530 aa25.82■■□□□ 1.72
MCM4-206ENST00000519138 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
MCM4-206ENST00000519138 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
MCM4-206ENST00000519138 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
MCM4-206ENST00000519138 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
MCM4-206ENST00000519138 SHROOM4Q9ULL8 1493 aa25.1■■□□□ 1.61
MCM4-206ENST00000519138 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
MCM4-206ENST00000519138 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
MCM4-206ENST00000519138 CECR2Q9BXF3 1484 aa24.87■■□□□ 1.57
MCM4-206ENST00000519138 SMARCA4P51532 1647 aa24.29■■□□□ 1.48
MCM4-206ENST00000519138 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
MCM4-206ENST00000519138 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
MCM4-206ENST00000519138 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
MCM4-206ENST00000519138 SMARCA2P51531 1590 aa24.11■■□□□ 1.45
MCM4-206ENST00000519138 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.45
MCM4-206ENST00000519138 HMGXB3Q12766 1538 aa24.04■■□□□ 1.44
MCM4-206ENST00000519138 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
MCM4-206ENST00000519138 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
MCM4-206ENST00000519138 NESP48681 1621 aa23.92■■□□□ 1.42
MCM4-206ENST00000519138 WIZO95785 1651 aa23.86■■□□□ 1.41
MCM4-206ENST00000519138 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
MCM4-206ENST00000519138 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.37
MCM4-206ENST00000519138 CUX2O14529 1486 aa23.62■■□□□ 1.37
MCM4-206ENST00000519138 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
MCM4-206ENST00000519138 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
MCM4-206ENST00000519138 THOC2Q8NI27 1593 aaKnown RBP23.56■■□□□ 1.36
MCM4-206ENST00000519138 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
MCM4-206ENST00000519138 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
MCM4-206ENST00000519138 PDS5BQ9NTI5 1447 aa23.44■■□□□ 1.34
MCM4-206ENST00000519138 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
MCM4-206ENST00000519138 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
MCM4-206ENST00000519138 CFTRP13569 1480 aa23.27■■□□□ 1.32
MCM4-206ENST00000519138 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
MCM4-206ENST00000519138 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
MCM4-206ENST00000519138 WDR62O43379 1518 aa23.23■■□□□ 1.31
MCM4-206ENST00000519138 CCDC88BA6NC98 1476 aa23.23■■□□□ 1.31
MCM4-206ENST00000519138 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
MCM4-206ENST00000519138 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
MCM4-206ENST00000519138 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
MCM4-206ENST00000519138 SUPT5HO00267 1087 aaKnown RBP22.86■■□□□ 1.25
MCM4-206ENST00000519138 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
MCM4-206ENST00000519138 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
MCM4-206ENST00000519138 IFT140Q96RY7 1462 aa22.74■■□□□ 1.23
MCM4-206ENST00000519138 ABCC8Q09428 1581 aa22.7■■□□□ 1.22
MCM4-206ENST00000519138 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
MCM4-206ENST00000519138 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
MCM4-206ENST00000519138 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
MCM4-206ENST00000519138 RAD54L2Q9Y4B4 1467 aa22.63■■□□□ 1.21
MCM4-206ENST00000519138 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.214e-8■■■■■ 28.1
MCM4-206ENST00000519138 OSCARQ8IYS5 282 aa22.61■■□□□ 1.21
MCM4-206ENST00000519138 CUX1P39880 1505 aa22.61■■□□□ 1.21
MCM4-206ENST00000519138 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
MCM4-206ENST00000519138 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
MCM4-206ENST00000519138 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
MCM4-206ENST00000519138 CHD1O14646 1710 aa22.54■■□□□ 1.2
MCM4-206ENST00000519138 SOGA1O94964 1423 aa22.53■■□□□ 1.2
MCM4-206ENST00000519138 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
MCM4-206ENST00000519138 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
MCM4-206ENST00000519138 FBLN2P98095 1184 aa22.42■■□□□ 1.18
MCM4-206ENST00000519138 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
MCM4-206ENST00000519138 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
MCM4-206ENST00000519138 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
MCM4-206ENST00000519138 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
MCM4-206ENST00000519138 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
MCM4-206ENST00000519138 ARHGEF11O15085 1522 aa22.32■■□□□ 1.16
MCM4-206ENST00000519138 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
MCM4-206ENST00000519138 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
MCM4-206ENST00000519138 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
MCM4-206ENST00000519138 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
MCM4-206ENST00000519138 ABCA5Q8WWZ7 1642 aa22.26■■□□□ 1.15
MCM4-206ENST00000519138 GAPVD1Q14C86 1478 aa22.26■■□□□ 1.15
MCM4-206ENST00000519138 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
MCM4-206ENST00000519138 ABCA10Q8WWZ4 1543 aa22.25■■□□□ 1.15
MCM4-206ENST00000519138 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
MCM4-206ENST00000519138 CHMP7Q8WUX9 453 aaPredicted RBP22.22■■□□□ 1.15
MCM4-206ENST00000519138 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
MCM4-206ENST00000519138 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
MCM4-206ENST00000519138 CYB5RLQ6IPT4 315 aa22.16■■□□□ 1.14
MCM4-206ENST00000519138 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
MCM4-206ENST00000519138 ADAMTS12P58397 1594 aa22.08■■□□□ 1.13
MCM4-206ENST00000519138 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
MCM4-206ENST00000519138 GRIN2AQ12879 1464 aa22.02■■□□□ 1.12
MCM4-206ENST00000519138 CEP170Q5SW79 1584 aa22■■□□□ 1.11
MCM4-206ENST00000519138 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
MCM4-206ENST00000519138 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
MCM4-206ENST00000519138 FHAD1B1AJZ9 1412 aa21.95■■□□□ 1.1
MCM4-206ENST00000519138 NUP160Q12769 1436 aa21.91■■□□□ 1.1
MCM4-206ENST00000519138 TRHP20396 242 aaPredicted RBP21.84■■□□□ 1.09
MCM4-206ENST00000519138 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
MCM4-206ENST00000519138 KIF27Q86VH2 1401 aa21.78■■□□□ 1.08
MCM4-206ENST00000519138 IGF1RP08069 1367 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms