RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	FAM212A	Q96EL1	285 aa		5.65	□□□□□ -1.5
SLC38A9-223	ENST00000515629	RIMS1	Q86UR5	1692 aa	Known RBP	5.65	□□□□□ -1.5
SLC38A9-223	ENST00000515629	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
SLC38A9-223	ENST00000515629	TSR1	Q2NL82	804 aa	Known RBP	5.65	□□□□□ -1.51
SLC38A9-223	ENST00000515629	MLEC	Q14165	292 aa		5.64	□□□□□ -1.51
SLC38A9-223	ENST00000515629	PARP9	Q8IXQ6	854 aa		5.64	□□□□□ -1.51
SLC38A9-223	ENST00000515629	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	5.64	□□□□□ -1.51
SLC38A9-223	ENST00000515629	TXNDC2	Q86VQ3	553 aa		5.64	□□□□□ -1.51
SLC38A9-223	ENST00000515629	UBXN4	Q92575	508 aa		5.64	□□□□□ -1.51
SLC38A9-223	ENST00000515629	KLHL42	Q9P2K6	505 aa		5.64	□□□□□ -1.51
SLC38A9-223	ENST00000515629	POGZ	Q7Z3K3	1410 aa		5.64	□□□□□ -1.51
SLC38A9-223	ENST00000515629	TTC37	Q6PGP7	1564 aa		5.64	□□□□□ -1.51
SLC38A9-223	ENST00000515629	SIGLEC1	Q9BZZ2	1709 aa		5.64	□□□□□ -1.51
SLC38A9-223	ENST00000515629	EEA1	Q15075	1411 aa		5.63	□□□□□ -1.51
SLC38A9-223	ENST00000515629	ZMYM4	Q5VZL5	1548 aa		5.63	□□□□□ -1.51
SLC38A9-223	ENST00000515629	ZFYVE16	Q7Z3T8	1539 aa		5.63	□□□□□ -1.51
SLC38A9-223	ENST00000515629	SCAPER	Q9BY12	1400 aa		5.63	□□□□□ -1.51
SLC38A9-223	ENST00000515629	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	5.63	□□□□□ -1.51
SLC38A9-223	ENST00000515629	MCC	P23508	829 aa		5.63	□□□□□ -1.51
SLC38A9-223	ENST00000515629	GRIPAP1	Q4V328	841 aa		5.63	□□□□□ -1.51
SLC38A9-223	ENST00000515629	CDK13	Q14004	1512 aa	Known RBP	5.63	□□□□□ -1.51
SLC38A9-223	ENST00000515629	CFAP74	Q9C0B2	1584 aa		5.63	□□□□□ -1.51
SLC38A9-223	ENST00000515629	HECW1	Q76N89	1606 aa		5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	RBM42	Q9BTD8	480 aa	Known RBP	5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	COG6	Q9Y2V7	657 aa		5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	MAGI2	Q86UL8	1455 aa		5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	EFCAB5	A4FU69	1503 aa		5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	PLCH2	O75038	1416 aa		5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	RFX1	P22670	979 aa		5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	RALBP1	Q15311	655 aa		5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	VTI1A	Q96AJ9	217 aa		5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	PCMTD1	Q96MG8	357 aa	Predicted RBP	5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	TERF2IP	Q9NYB0	399 aa		5.62	□□□□□ -1.51
SLC38A9-223	ENST00000515629	MAP4K4	O95819	1239 aa	Predicted RBP	5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	MLLT3	P42568	568 aa	Predicted RBP	5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	RASEF	Q8IZ41	740 aa		5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	CERK	Q8TCT0	537 aa		5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	EVI5L	Q96CN4	794 aa		5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	5.61	□□□□□ -1.51	4e-7	■■■□□ 18.6
SLC38A9-223	ENST00000515629	CLSPN	Q9HAW4	1339 aa		5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	CEBPA	P49715	358 aa	Predicted RBP	5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	CALR3	Q96L12	384 aa	Known RBP	5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	GOPC	Q9HD26	462 aa		5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	ZNF16	P17020	682 aa	Predicted RBP	5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	CDCA7	Q9BWT1	371 aa	Predicted RBP	5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	ATP1B4	Q9UN42	357 aa	Predicted RBP	5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.61	□□□□□ -1.51
SLC38A9-223	ENST00000515629	EFCAB2	Q5VUJ9	269 aa		5.6	□□□□□ -1.51
SLC38A9-223	ENST00000515629	SECISBP2L	Q93073	1101 aa	Known RBP	5.6	□□□□□ -1.51
SLC38A9-223	ENST00000515629	GPATCH3	Q96I76	525 aa		5.6	□□□□□ -1.51
SLC38A9-223	ENST00000515629	ATP10A	O60312	1499 aa		5.6	□□□□□ -1.51
SLC38A9-223	ENST00000515629	FER1L4	A9Z1Z3	1794 aa		5.6	□□□□□ -1.51
SLC38A9-223	ENST00000515629	PRR29	P0C7W0	189 aa		5.6	□□□□□ -1.51
SLC38A9-223	ENST00000515629	C8orf37	Q96NL8	207 aa		5.6	□□□□□ -1.51
SLC38A9-223	ENST00000515629	UST	Q9Y2C2	406 aa		5.6	□□□□□ -1.51
SLC38A9-223	ENST00000515629	ARHGEF12	Q9NZN5	1544 aa		5.59	□□□□□ -1.51
SLC38A9-223	ENST00000515629	CSB-PGBD3	P0DP91	1061 aa		5.59	□□□□□ -1.51
SLC38A9-223	ENST00000515629	ZC3H6	P61129	1189 aa	Known RBP	5.59	□□□□□ -1.51
SLC38A9-223	ENST00000515629	C9orf84	Q5VXU9	1444 aa		5.59	□□□□□ -1.51
SLC38A9-223	ENST00000515629	AFAP1	Q8N556	730 aa		5.59	□□□□□ -1.51
SLC38A9-223	ENST00000515629	NAALADL2	Q58DX5	795 aa		5.59	□□□□□ -1.52
SLC38A9-223	ENST00000515629	DPH6	Q7L8W6	267 aa		5.59	□□□□□ -1.52
SLC38A9-223	ENST00000515629	FMN1	Q68DA7	1419 aa		5.58	□□□□□ -1.52
SLC38A9-223	ENST00000515629	REM2	Q8IYK8	340 aa	Predicted RBP	5.58	□□□□□ -1.52
SLC38A9-223	ENST00000515629	MORC4	Q8TE76	937 aa		5.58	□□□□□ -1.52
SLC38A9-223	ENST00000515629	PBXIP1	Q96AQ6	731 aa		5.58	□□□□□ -1.52
SLC38A9-223	ENST00000515629	KCNG1	Q9UIX4	513 aa		5.58	□□□□□ -1.52
SLC38A9-223	ENST00000515629	ZNF518A	Q6AHZ1	1483 aa		5.58	□□□□□ -1.52
SLC38A9-223	ENST00000515629	ARHGAP35	Q9NRY4	1499 aa		5.58	□□□□□ -1.52
SLC38A9-223	ENST00000515629	KIF14	Q15058	1648 aa		5.58	□□□□□ -1.52
SLC38A9-223	ENST00000515629	NME8	Q8N427	588 aa		5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	GIPC2	Q8TF65	315 aa		5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	GLMN	Q92990	594 aa		5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	MYO5C	Q9NQX4	1742 aa		5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	TRO	Q12816	1431 aa	Predicted RBP	5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	PREX1	Q8TCU6	1659 aa		5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	TTLL12	Q14166	644 aa	Predicted RBP	5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	RBM46	Q8TBY0	533 aa	Known RBP	5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	CCDC102A	Q96A19	550 aa		5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	BCL2L13	Q9BXK5	485 aa		5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	SETD1B	Q9UPS6	1966 aa	Known RBP	5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	UHRF1BP1	Q6BDS2	1440 aa		5.57	□□□□□ -1.52
SLC38A9-223	ENST00000515629	KDM5C	P41229	1560 aa		5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	ARHGAP5	Q13017	1502 aa		5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	PARN	O95453	639 aa	Known RBP	5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	PTMA	P06454	111 aa	Known RBP	5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	FOXD4	Q12950	439 aa	Predicted RBP	5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	POM121C	A8CG34	1229 aa		5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	PPFIA4	O75335	1185 aa		5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	NEFM	P07197	916 aa		5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	STRC	Q7RTU9	1775 aa		5.56	□□□□□ -1.52
SLC38A9-223	ENST00000515629	SF3A1	Q15459	793 aa	Known RBP	5.55	□□□□□ -1.52
SLC38A9-223	ENST00000515629	ILDR2	Q71H61	639 aa		5.55	□□□□□ -1.52
SLC38A9-223	ENST00000515629	DIP2C	Q9Y2E4	1556 aa		5.55	□□□□□ -1.52
SLC38A9-223	ENST00000515629	DISP3	Q9P2K9	1392 aa		5.55	□□□□□ -1.52
SLC38A9-223	ENST00000515629	SBNO2	Q9Y2G9	1366 aa		5.55	□□□□□ -1.52
SLC38A9-223	ENST00000515629	CLIP1	P30622	1438 aa		5.55	□□□□□ -1.52
SLC38A9-223	ENST00000515629	TRAPPC8	Q9Y2L5	1435 aa		5.55	□□□□□ -1.52
SLC38A9-223	ENST00000515629	PAX3	P23760	479 aa		5.55	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms