RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 MYOM2P54296 1465 aa30.84■■■□□ 2.53
SQSTM1-215ENST00000514093 BCL9LQ86UU0 1499 aa30.84■■■□□ 2.53
SQSTM1-215ENST00000514093 HFM1A2PYH4 1435 aa30.83■■■□□ 2.53
SQSTM1-215ENST00000514093 NPHP3Q7Z494 1330 aa30.83■■■□□ 2.53
SQSTM1-215ENST00000514093 FOXO3O43524 673 aa30.83■■■□□ 2.53
SQSTM1-215ENST00000514093 FOXD1Q16676 465 aa30.82■■■□□ 2.52
SQSTM1-215ENST00000514093 PRAG1Q86YV5 1406 aa30.81■■■□□ 2.52
SQSTM1-215ENST00000514093 NUTM2FA1L443 756 aa30.81■■■□□ 2.52
SQSTM1-215ENST00000514093 EP400Q96L91 3159 aa30.81■■■□□ 2.52
SQSTM1-215ENST00000514093 RPGRIP1LQ68CZ1 1315 aa30.8■■■□□ 2.52
SQSTM1-215ENST00000514093 GJD4Q96KN9 370 aaPredicted RBP30.8■■■□□ 2.52
SQSTM1-215ENST00000514093 PXDNQ92626 1479 aa30.8■■■□□ 2.52
SQSTM1-215ENST00000514093 NAIPQ13075 1403 aa30.79■■■□□ 2.52
SQSTM1-215ENST00000514093 CCDC125Q86Z20 511 aa30.77■■■□□ 2.52
SQSTM1-215ENST00000514093 STK26Q9P289 416 aa30.76■■■□□ 2.51
SQSTM1-215ENST00000514093 WAPLQ7Z5K2 1190 aa30.75■■■□□ 2.51
SQSTM1-215ENST00000514093 CDC42BPGQ6DT37 1551 aa30.74■■■□□ 2.51
SQSTM1-215ENST00000514093 SLC4A1APQ9BWU0 796 aaKnown RBP30.73■■■□□ 2.51
SQSTM1-215ENST00000514093 PPLO60437 1756 aa30.73■■■□□ 2.51
SQSTM1-215ENST00000514093 MARF1Q9Y4F3 1742 aaKnown RBP30.73■■■□□ 2.51
SQSTM1-215ENST00000514093 ADGRF5Q8IZF2 1346 aa30.71■■■□□ 2.51
SQSTM1-215ENST00000514093 UNC5CLQ8IV45 518 aa30.69■■■□□ 2.5
SQSTM1-215ENST00000514093 LRPPRCP42704 1394 aaKnown RBP30.68■■■□□ 2.5
SQSTM1-215ENST00000514093 RALGAPBQ86X10 1494 aa30.66■■■□□ 2.5
SQSTM1-215ENST00000514093 TMEM132EQ6IEE7 984 aa30.65■■■□□ 2.5
SQSTM1-215ENST00000514093 DEFB132Q7Z7B7 95 aa30.65■■■□□ 2.5
SQSTM1-215ENST00000514093 PLEKHH1Q9ULM0 1364 aa30.65■■■□□ 2.5
SQSTM1-215ENST00000514093 GLI3P10071 1580 aa30.64■■■□□ 2.5
SQSTM1-215ENST00000514093 RGL3Q3MIN7 710 aa30.64■■■□□ 2.5
SQSTM1-215ENST00000514093 RRBP1Q9P2E9 1410 aaKnown RBP30.64■■■□□ 2.49
SQSTM1-215ENST00000514093 PLEKHG5O94827 1062 aa30.63■■■□□ 2.49
SQSTM1-215ENST00000514093 SPATA31A3Q5VYP0 1347 aa30.63■■■□□ 2.49
SQSTM1-215ENST00000514093 SLIT2O94813 1529 aa30.63■■■□□ 2.49
SQSTM1-215ENST00000514093 BLMP54132 1417 aaPredicted RBP30.61■■■□□ 2.49
SQSTM1-215ENST00000514093 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.61■■■□□ 2.49
SQSTM1-215ENST00000514093 KRT28Q7Z3Y7 464 aa30.6■■■□□ 2.49
SQSTM1-215ENST00000514093 TECPR2O15040 1411 aa30.58■■■□□ 2.49
SQSTM1-215ENST00000514093 SEPT12Q8IYM1 358 aa30.58■■■□□ 2.49
SQSTM1-215ENST00000514093 CABLES1Q8TDN4 633 aa30.57■■■□□ 2.48
SQSTM1-215ENST00000514093 BRWD3Q6RI45 1802 aa30.57■■■□□ 2.48
SQSTM1-215ENST00000514093 HAP1P54257 671 aaPredicted RBP30.56■■■□□ 2.48
SQSTM1-215ENST00000514093 ABCC11Q96J66 1382 aa30.55■■■□□ 2.48
SQSTM1-215ENST00000514093 SF3B2Q13435 895 aaKnown RBP30.54■■■□□ 2.48
SQSTM1-215ENST00000514093 FMN2Q9NZ56 1722 aa30.53■■■□□ 2.48
SQSTM1-215ENST00000514093 CCDC9Q9Y3X0 531 aaKnown RBP30.53■■■□□ 2.48
SQSTM1-215ENST00000514093 USP32Q8NFA0 1604 aa30.53■■■□□ 2.48
SQSTM1-215ENST00000514093 CCDC144AA2RUR9 1427 aa30.53■■■□□ 2.48
SQSTM1-215ENST00000514093 VPS72Q15906 364 aa30.51■■■□□ 2.47
SQSTM1-215ENST00000514093 KIF1AQ12756 1690 aa30.49■■■□□ 2.47
SQSTM1-215ENST00000514093 SPATA31E1Q6ZUB1 1445 aa30.49■■■□□ 2.47
SQSTM1-215ENST00000514093 LMOD2Q6P5Q4 547 aa30.49■■■□□ 2.47
SQSTM1-215ENST00000514093 PHF8Q9UPP1 1060 aa30.49■■■□□ 2.47
SQSTM1-215ENST00000514093 ANKRD30BQ9BXX2 1392 aa30.49■■■□□ 2.47
SQSTM1-215ENST00000514093 YTHDC2Q9H6S0 1430 aaKnown RBP30.48■■■□□ 2.47
SQSTM1-215ENST00000514093 KNDC1Q76NI1 1749 aa30.47■■■□□ 2.47
SQSTM1-215ENST00000514093 PSME1Q06323 249 aa30.47■■■□□ 2.47
SQSTM1-215ENST00000514093 TNS3Q68CZ2 1445 aa30.47■■■□□ 2.47
SQSTM1-215ENST00000514093 IFT172Q9UG01 1749 aa30.45■■■□□ 2.47
SQSTM1-215ENST00000514093 KRT27Q7Z3Y8 459 aa30.45■■■□□ 2.47
SQSTM1-215ENST00000514093 RGPD8O14715 1765 aaPredicted RBP30.45■■■□□ 2.46
SQSTM1-215ENST00000514093 PIK3C2GO75747 1445 aa30.45■■■□□ 2.46
SQSTM1-215ENST00000514093 ONECUT3O60422 494 aaPredicted RBP30.44■■■□□ 2.46
SQSTM1-215ENST00000514093 A0A0G2JS52 829 aa30.42■■■□□ 2.46
SQSTM1-215ENST00000514093 PSDA5PKW4 1024 aaPredicted RBP30.42■■■□□ 2.46
SQSTM1-215ENST00000514093 FAM83GA6ND36 823 aa30.42■■■□□ 2.46
SQSTM1-215ENST00000514093 MYT1Q01538 1121 aa30.42■■■□□ 2.46
SQSTM1-215ENST00000514093 SAFB2Q14151 953 aaKnown RBP eCLIP30.42■■■□□ 2.46
SQSTM1-215ENST00000514093 PLCH1Q4KWH8 1693 aa30.42■■■□□ 2.46
SQSTM1-215ENST00000514093 SIRT1Q96EB6 747 aa30.4■■■□□ 2.46
SQSTM1-215ENST00000514093 MPHOSPH9Q99550 1183 aa30.4■■■□□ 2.46
SQSTM1-215ENST00000514093 PMFBP1Q8TBY8 1022 aa30.38■■■□□ 2.45
SQSTM1-215ENST00000514093 SBNO1A3KN83 1393 aa30.38■■■□□ 2.45
SQSTM1-215ENST00000514093 NWD2Q9ULI1 1742 aa30.37■■■□□ 2.45
SQSTM1-215ENST00000514093 CFAP70Q5T0N1 1121 aa30.37■■■□□ 2.45
SQSTM1-215ENST00000514093 C14orf93Q9H972 538 aaKnown RBP30.37■■■□□ 2.45
SQSTM1-215ENST00000514093 FAM98CQ17RN3 349 aaKnown RBP30.36■■■□□ 2.45
SQSTM1-215ENST00000514093 PRAM1Q96QH2 718 aa30.36■■■□□ 2.45
SQSTM1-215ENST00000514093 NRXN1Q9ULB1 1477 aa30.36■■■□□ 2.45
SQSTM1-215ENST00000514093 ABCA3Q99758 1704 aa30.34■■■□□ 2.45
SQSTM1-215ENST00000514093 ARHGEF10O15013 1369 aa30.34■■■□□ 2.45
SQSTM1-215ENST00000514093 BAG6P46379 1132 aa30.34■■■□□ 2.45
SQSTM1-215ENST00000514093 LRP5O75197 1615 aa30.33■■■□□ 2.45
SQSTM1-215ENST00000514093 DHX57Q6P158 1386 aaKnown RBP30.32■■■□□ 2.44
SQSTM1-215ENST00000514093 BTG4Q9NY30 223 aa30.32■■■□□ 2.44
SQSTM1-215ENST00000514093 HRCP23327 699 aa30.31■■■□□ 2.44
SQSTM1-215ENST00000514093 FAM182BQ5T319 152 aa30.31■■■□□ 2.44
SQSTM1-215ENST00000514093 EN1Q05925 392 aaPredicted RBP30.29■■■□□ 2.44
SQSTM1-215ENST00000514093 POGKQ9P215 609 aa30.28■■■□□ 2.44
SQSTM1-215ENST00000514093 NRAPQ86VF7 1730 aa30.25■■■□□ 2.43
SQSTM1-215ENST00000514093 HIRIP3Q9BW71 556 aaPredicted RBP30.24■■■□□ 2.43
SQSTM1-215ENST00000514093 R3HDM1Q15032 1099 aaKnown RBP30.21■■■□□ 2.43
SQSTM1-215ENST00000514093 ANKARQ7Z5J8 1434 aa30.21■■■□□ 2.43
SQSTM1-215ENST00000514093 SPATA31A5Q5VU36 1347 aa30.19■■■□□ 2.42
SQSTM1-215ENST00000514093 SPATA31A7Q8IWB4 1347 aa30.19■■■□□ 2.42
SQSTM1-215ENST00000514093 TRPM3Q9HCF6 1732 aaPredicted RBP30.19■■■□□ 2.42
SQSTM1-215ENST00000514093 TRAK1Q9UPV9 953 aa30.18■■■□□ 2.42
SQSTM1-215ENST00000514093 GPRASP1Q5JY77 1395 aa30.17■■■□□ 2.42
SQSTM1-215ENST00000514093 COL14A1Q05707 1796 aaKnown RBP30.17■■■□□ 2.42
SQSTM1-215ENST00000514093 MINK1Q8N4C8 1332 aaPredicted RBP30.17■■■□□ 2.42
SQSTM1-215ENST00000514093 PRR36Q9H6K5 1346 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms