RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
RNF4-218ENST00000513284 FOXO3O43524 673 aa17.3■□□□□ 0.36
RNF4-218ENST00000513284 ESCO1Q5FWF5 840 aa17.3■□□□□ 0.36
RNF4-218ENST00000513284 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
RNF4-218ENST00000513284 PXDNQ92626 1479 aa17.3■□□□□ 0.36
RNF4-218ENST00000513284 GLI3P10071 1580 aa17.29■□□□□ 0.36
RNF4-218ENST00000513284 RALGAPBQ86X10 1494 aa17.29■□□□□ 0.36
RNF4-218ENST00000513284 MARF1Q9Y4F3 1742 aaKnown RBP17.27■□□□□ 0.36
RNF4-218ENST00000513284 NPHP3Q7Z494 1330 aa17.27■□□□□ 0.36
RNF4-218ENST00000513284 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.35
RNF4-218ENST00000513284 SLIT2O94813 1529 aa17.26■□□□□ 0.35
RNF4-218ENST00000513284 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
RNF4-218ENST00000513284 PRAG1Q86YV5 1406 aa17.26■□□□□ 0.35
RNF4-218ENST00000513284 ONECUT3O60422 494 aaPredicted RBP17.25■□□□□ 0.35
RNF4-218ENST00000513284 SEPT12Q8IYM1 358 aa17.25■□□□□ 0.35
RNF4-218ENST00000513284 CLTCL1P53675 1640 aa17.25■□□□□ 0.35
RNF4-218ENST00000513284 PSDA5PKW4 1024 aaPredicted RBP17.24■□□□□ 0.35
RNF4-218ENST00000513284 LRP5O75197 1615 aa17.24■□□□□ 0.35
RNF4-218ENST00000513284 VGFO15240 615 aaPredicted RBP17.23■□□□□ 0.35
RNF4-218ENST00000513284 HRCP23327 699 aa17.23■□□□□ 0.35
RNF4-218ENST00000513284 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.22■□□□□ 0.35
RNF4-218ENST00000513284 NUTM2FA1L443 756 aa17.22■□□□□ 0.35
RNF4-218ENST00000513284 HFM1A2PYH4 1435 aa17.21■□□□□ 0.35
RNF4-218ENST00000513284 ITGAEP38570 1179 aa17.21■□□□□ 0.35
RNF4-218ENST00000513284 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.34
RNF4-218ENST00000513284 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
RNF4-218ENST00000513284 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
RNF4-218ENST00000513284 VPS72Q15906 364 aa17.19■□□□□ 0.34
RNF4-218ENST00000513284 KRT27Q7Z3Y8 459 aa17.17■□□□□ 0.34
RNF4-218ENST00000513284 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
RNF4-218ENST00000513284 CDC42BPGQ6DT37 1551 aa17.16■□□□□ 0.34
RNF4-218ENST00000513284 KRT28Q7Z3Y7 464 aa17.16■□□□□ 0.34
RNF4-218ENST00000513284 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
RNF4-218ENST00000513284 NAIPQ13075 1403 aa17.15■□□□□ 0.34
RNF4-218ENST00000513284 RPGRIP1LQ68CZ1 1315 aa17.15■□□□□ 0.34
RNF4-218ENST00000513284 KIF1BO60333 1816 aa17.14■□□□□ 0.34
RNF4-218ENST00000513284 FAM83GA6ND36 823 aa17.13■□□□□ 0.33
RNF4-218ENST00000513284 EN1Q05925 392 aaPredicted RBP17.13■□□□□ 0.33
RNF4-218ENST00000513284 STK26Q9P289 416 aa17.13■□□□□ 0.33
RNF4-218ENST00000513284 PLEKHH1Q9ULM0 1364 aa17.13■□□□□ 0.33
RNF4-218ENST00000513284 USP32Q8NFA0 1604 aa17.12■□□□□ 0.33
RNF4-218ENST00000513284 BAG6P46379 1132 aa17.12■□□□□ 0.33
RNF4-218ENST00000513284 R3HDM1Q15032 1099 aaKnown RBP17.11■□□□□ 0.33
RNF4-218ENST00000513284 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
RNF4-218ENST00000513284 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
RNF4-218ENST00000513284 FAM182BQ5T319 152 aa17.1■□□□□ 0.33
RNF4-218ENST00000513284 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
RNF4-218ENST00000513284 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
RNF4-218ENST00000513284 TECPR2O15040 1411 aa17.08■□□□□ 0.32
RNF4-218ENST00000513284 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
RNF4-218ENST00000513284 ABCC11Q96J66 1382 aa17.07■□□□□ 0.32
RNF4-218ENST00000513284 PPLO60437 1756 aa17.07■□□□□ 0.32
RNF4-218ENST00000513284 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
RNF4-218ENST00000513284 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
RNF4-218ENST00000513284 NWD2Q9ULI1 1742 aa17.05■□□□□ 0.32
RNF4-218ENST00000513284 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
RNF4-218ENST00000513284 PHF8Q9UPP1 1060 aa17.05■□□□□ 0.32
RNF4-218ENST00000513284 TNS3Q68CZ2 1445 aa17.04■□□□□ 0.32
RNF4-218ENST00000513284 FMN2Q9NZ56 1722 aa17.04■□□□□ 0.32
RNF4-218ENST00000513284 EZH2Q15910 746 aaKnown RBP17.04■□□□□ 0.32
RNF4-218ENST00000513284 PSME1Q06323 249 aa17.03■□□□□ 0.32
RNF4-218ENST00000513284 PPARGC1BQ86YN6 1023 aaKnown RBP17.03■□□□□ 0.32
RNF4-218ENST00000513284 SBNO1A3KN83 1393 aa17.02■□□□□ 0.32
RNF4-218ENST00000513284 RGPD8O14715 1765 aaPredicted RBP17.02■□□□□ 0.32
RNF4-218ENST00000513284 A0A0G2JS52 829 aa17.02■□□□□ 0.32
RNF4-218ENST00000513284 MYT1Q01538 1121 aa17.02■□□□□ 0.32
RNF4-218ENST00000513284 CAMKK2Q96RR4 588 aa17.02■□□□□ 0.32
RNF4-218ENST00000513284 BTG4Q9NY30 223 aa17.02■□□□□ 0.32
RNF4-218ENST00000513284 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
RNF4-218ENST00000513284 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
RNF4-218ENST00000513284 SIRT1Q96EB6 747 aa17.01■□□□□ 0.31
RNF4-218ENST00000513284 DISP2A7MBM2 1401 aa17■□□□□ 0.31
RNF4-218ENST00000513284 YY1P25490 414 aa17■□□□□ 0.31
RNF4-218ENST00000513284 RGL3Q3MIN7 710 aa17■□□□□ 0.31
RNF4-218ENST00000513284 NRAPQ86VF7 1730 aa16.99■□□□□ 0.31
RNF4-218ENST00000513284 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
RNF4-218ENST00000513284 SPATA31A5Q5VU36 1347 aa16.98■□□□□ 0.31
RNF4-218ENST00000513284 SPATA31A7Q8IWB4 1347 aa16.98■□□□□ 0.31
RNF4-218ENST00000513284 RRBP1Q9P2E9 1410 aaKnown RBP16.98■□□□□ 0.31
RNF4-218ENST00000513284 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
RNF4-218ENST00000513284 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
RNF4-218ENST00000513284 YTHDC2Q9H6S0 1430 aaKnown RBP16.97■□□□□ 0.31
RNF4-218ENST00000513284 PMFBP1Q8TBY8 1022 aa16.97■□□□□ 0.31
RNF4-218ENST00000513284 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.31
RNF4-218ENST00000513284 ARHGEF10O15013 1369 aa16.96■□□□□ 0.31
RNF4-218ENST00000513284 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.3
RNF4-218ENST00000513284 TNS1Q9HBL0 1735 aaKnown RBP16.96■□□□□ 0.3
RNF4-218ENST00000513284 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.3
RNF4-218ENST00000513284 TRIM37O94972 964 aa16.95■□□□□ 0.3
RNF4-218ENST00000513284 C14orf93Q9H972 538 aaKnown RBP16.93■□□□□ 0.3
RNF4-218ENST00000513284 THSD7AQ9UPZ6 1657 aa16.93■□□□□ 0.3
RNF4-218ENST00000513284 PIK3C2GO75747 1445 aa16.93■□□□□ 0.3
RNF4-218ENST00000513284 IFT172Q9UG01 1749 aa16.92■□□□□ 0.3
RNF4-218ENST00000513284 ANKRD30BQ9BXX2 1392 aa16.91■□□□□ 0.3
RNF4-218ENST00000513284 APBA3O96018 575 aa16.91■□□□□ 0.3
RNF4-218ENST00000513284 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
RNF4-218ENST00000513284 CFAP70Q5T0N1 1121 aa16.9■□□□□ 0.3
RNF4-218ENST00000513284 FAM196AQ6ZSG2 479 aa16.9■□□□□ 0.3
RNF4-218ENST00000513284 PRAM1Q96QH2 718 aa16.9■□□□□ 0.3
RNF4-218ENST00000513284 SPATA31A1Q5TZJ5 1347 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms