RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 VGFO15240 615 aaPredicted RBP17.76■□□□□ 0.43
RNF4-216ENST00000511859 SF3B2Q13435 895 aaKnown RBP17.76■□□□□ 0.43
RNF4-216ENST00000511859 NEXMIFQ5QGS0 1516 aa17.75■□□□□ 0.43
RNF4-216ENST00000511859 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
RNF4-216ENST00000511859 UNC5CLQ8IV45 518 aa17.75■□□□□ 0.43
RNF4-216ENST00000511859 ROBO2Q9HCK4 1378 aa17.75■□□□□ 0.43
RNF4-216ENST00000511859 HFM1A2PYH4 1435 aa17.73■□□□□ 0.43
RNF4-216ENST00000511859 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
RNF4-216ENST00000511859 LRPPRCP42704 1394 aaKnown RBP17.72■□□□□ 0.43
RNF4-216ENST00000511859 FOXO3O43524 673 aa17.72■□□□□ 0.43
RNF4-216ENST00000511859 DEFB132Q7Z7B7 95 aa17.72■□□□□ 0.43
RNF4-216ENST00000511859 KIF1BO60333 1816 aa17.72■□□□□ 0.43
RNF4-216ENST00000511859 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.72■□□□□ 0.43
RNF4-216ENST00000511859 PXDNQ92626 1479 aa17.7■□□□□ 0.42
RNF4-216ENST00000511859 LRP5O75197 1615 aa17.69■□□□□ 0.42
RNF4-216ENST00000511859 RALGAPBQ86X10 1494 aa17.69■□□□□ 0.42
RNF4-216ENST00000511859 BRWD3Q6RI45 1802 aa17.68■□□□□ 0.42
RNF4-216ENST00000511859 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
RNF4-216ENST00000511859 SLIT2O94813 1529 aa17.68■□□□□ 0.42
RNF4-216ENST00000511859 CLTCL1P53675 1640 aa17.67■□□□□ 0.42
RNF4-216ENST00000511859 GLI3P10071 1580 aa17.67■□□□□ 0.42
RNF4-216ENST00000511859 ONECUT3O60422 494 aaPredicted RBP17.66■□□□□ 0.42
RNF4-216ENST00000511859 XPCQ01831 940 aaPredicted RBP17.66■□□□□ 0.42
RNF4-216ENST00000511859 SEPT12Q8IYM1 358 aa17.66■□□□□ 0.42
RNF4-216ENST00000511859 ITGAEP38570 1179 aa17.65■□□□□ 0.42
RNF4-216ENST00000511859 CDC42BPGQ6DT37 1551 aa17.64■□□□□ 0.41
RNF4-216ENST00000511859 VPS72Q15906 364 aa17.64■□□□□ 0.41
RNF4-216ENST00000511859 KRT27Q7Z3Y8 459 aa17.64■□□□□ 0.41
RNF4-216ENST00000511859 SPATA31A3Q5VYP0 1347 aa17.63■□□□□ 0.41
RNF4-216ENST00000511859 HRCP23327 699 aa17.63■□□□□ 0.41
RNF4-216ENST00000511859 BAG6P46379 1132 aa17.62■□□□□ 0.41
RNF4-216ENST00000511859 PSDA5PKW4 1024 aaPredicted RBP17.6■□□□□ 0.41
RNF4-216ENST00000511859 NUTM2FA1L443 756 aa17.59■□□□□ 0.41
RNF4-216ENST00000511859 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
RNF4-216ENST00000511859 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
RNF4-216ENST00000511859 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.4
RNF4-216ENST00000511859 NAIPQ13075 1403 aa17.58■□□□□ 0.4
RNF4-216ENST00000511859 CCDC144AA2RUR9 1427 aa17.57■□□□□ 0.4
RNF4-216ENST00000511859 PSME1Q06323 249 aa17.57■□□□□ 0.4
RNF4-216ENST00000511859 USP32Q8NFA0 1604 aa17.57■□□□□ 0.4
RNF4-216ENST00000511859 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
RNF4-216ENST00000511859 NWD2Q9ULI1 1742 aa17.56■□□□□ 0.4
RNF4-216ENST00000511859 PPLO60437 1756 aa17.55■□□□□ 0.4
RNF4-216ENST00000511859 STK26Q9P289 416 aa17.54■□□□□ 0.4
RNF4-216ENST00000511859 TECPR2O15040 1411 aa17.54■□□□□ 0.4
RNF4-216ENST00000511859 KIF1AQ12756 1690 aa17.53■□□□□ 0.4
RNF4-216ENST00000511859 CABLES1Q8TDN4 633 aa17.53■□□□□ 0.4
RNF4-216ENST00000511859 ABCC11Q96J66 1382 aa17.52■□□□□ 0.4
RNF4-216ENST00000511859 A0A0G2JS52 829 aa17.52■□□□□ 0.39
RNF4-216ENST00000511859 MYT1Q01538 1121 aa17.52■□□□□ 0.39
RNF4-216ENST00000511859 EN1Q05925 392 aaPredicted RBP17.52■□□□□ 0.39
RNF4-216ENST00000511859 FAM83GA6ND36 823 aa17.51■□□□□ 0.39
RNF4-216ENST00000511859 TNS3Q68CZ2 1445 aa17.51■□□□□ 0.39
RNF4-216ENST00000511859 PLCH1Q4KWH8 1693 aa17.5■□□□□ 0.39
RNF4-216ENST00000511859 FMN2Q9NZ56 1722 aa17.5■□□□□ 0.39
RNF4-216ENST00000511859 PHF8Q9UPP1 1060 aa17.5■□□□□ 0.39
RNF4-216ENST00000511859 SBNO1A3KN83 1393 aa17.49■□□□□ 0.39
RNF4-216ENST00000511859 ARHGEF10O15013 1369 aa17.49■□□□□ 0.39
RNF4-216ENST00000511859 R3HDM1Q15032 1099 aaKnown RBP17.49■□□□□ 0.39
RNF4-216ENST00000511859 FAM98CQ17RN3 349 aaKnown RBP17.49■□□□□ 0.39
RNF4-216ENST00000511859 SIRT1Q96EB6 747 aa17.49■□□□□ 0.39
RNF4-216ENST00000511859 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
RNF4-216ENST00000511859 LMOD2Q6P5Q4 547 aa17.48■□□□□ 0.39
RNF4-216ENST00000511859 RGPD1P0DJD0 1748 aa17.47■□□□□ 0.39
RNF4-216ENST00000511859 SLC4A1APQ9BWU0 796 aaKnown RBP17.47■□□□□ 0.39
RNF4-216ENST00000511859 RGPD8O14715 1765 aaPredicted RBP17.46■□□□□ 0.39
RNF4-216ENST00000511859 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
RNF4-216ENST00000511859 TMEM132EQ6IEE7 984 aa17.46■□□□□ 0.39
RNF4-216ENST00000511859 KNDC1Q76NI1 1749 aa17.46■□□□□ 0.39
RNF4-216ENST00000511859 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
RNF4-216ENST00000511859 BTG4Q9NY30 223 aa17.45■□□□□ 0.38
RNF4-216ENST00000511859 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
RNF4-216ENST00000511859 RRBP1Q9P2E9 1410 aaKnown RBP17.45■□□□□ 0.38
RNF4-216ENST00000511859 ANKRD30BQ9BXX2 1392 aa17.45■□□□□ 0.38
RNF4-216ENST00000511859 YY1P25490 414 aa17.44■□□□□ 0.38
RNF4-216ENST00000511859 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
RNF4-216ENST00000511859 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
RNF4-216ENST00000511859 ABCA3Q99758 1704 aa17.42■□□□□ 0.38
RNF4-216ENST00000511859 YTHDC2Q9H6S0 1430 aaKnown RBP17.41■□□□□ 0.38
RNF4-216ENST00000511859 EZH2Q15910 746 aaKnown RBP17.41■□□□□ 0.38
RNF4-216ENST00000511859 SPATA31A5Q5VU36 1347 aa17.41■□□□□ 0.38
RNF4-216ENST00000511859 SPATA31A7Q8IWB4 1347 aa17.41■□□□□ 0.38
RNF4-216ENST00000511859 FAM182BQ5T319 152 aa17.4■□□□□ 0.38
RNF4-216ENST00000511859 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
RNF4-216ENST00000511859 NRAPQ86VF7 1730 aa17.4■□□□□ 0.38
RNF4-216ENST00000511859 IFT172Q9UG01 1749 aa17.39■□□□□ 0.38
RNF4-216ENST00000511859 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
RNF4-216ENST00000511859 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
RNF4-216ENST00000511859 PARD3Q8TEW0 1356 aa17.38■□□□□ 0.37
RNF4-216ENST00000511859 PMFBP1Q8TBY8 1022 aa17.38■□□□□ 0.37
RNF4-216ENST00000511859 PIK3C2GO75747 1445 aa17.37■□□□□ 0.37
RNF4-216ENST00000511859 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
RNF4-216ENST00000511859 TNS1Q9HBL0 1735 aaKnown RBP17.36■□□□□ 0.37
RNF4-216ENST00000511859 DHX57Q6P158 1386 aaKnown RBP17.36■□□□□ 0.37
RNF4-216ENST00000511859 TRIM37O94972 964 aa17.36■□□□□ 0.37
RNF4-216ENST00000511859 C14orf93Q9H972 538 aaKnown RBP17.36■□□□□ 0.37
RNF4-216ENST00000511859 SPATA31E1Q6ZUB1 1445 aa17.36■□□□□ 0.37
RNF4-216ENST00000511859 APBA3O96018 575 aa17.35■□□□□ 0.37
RNF4-216ENST00000511859 NBPF8Q3BBV2 869 aa17.34■□□□□ 0.37
RNF4-216ENST00000511859 NBPF14Q5TI25 921 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms