RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
SEC24D-209ENST00000509818 STK26Q9P289 416 aa12.19□□□□□ -0.46
SEC24D-209ENST00000509818 NEFLP07196 543 aa12.19□□□□□ -0.46
SEC24D-209ENST00000509818 INSRP06213 1382 aa12.18□□□□□ -0.46
SEC24D-209ENST00000509818 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
SEC24D-209ENST00000509818 CARD14Q9BXL6 1004 aa12.17□□□□□ -0.46
SEC24D-209ENST00000509818 POGKQ9P215 609 aa12.17□□□□□ -0.46
SEC24D-209ENST00000509818 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
SEC24D-209ENST00000509818 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
SEC24D-209ENST00000509818 UBR1Q8IWV7 1749 aa12.16□□□□□ -0.46
SEC24D-209ENST00000509818 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
SEC24D-209ENST00000509818 PRAM1Q96QH2 718 aa12.15□□□□□ -0.46
SEC24D-209ENST00000509818 SLC12A5Q9H2X9 1139 aa12.15□□□□□ -0.46
SEC24D-209ENST00000509818 DLC1Q96QB1 1528 aa12.15□□□□□ -0.46
SEC24D-209ENST00000509818 TULP4Q9NRJ4 1543 aa12.15□□□□□ -0.46
SEC24D-209ENST00000509818 ANKLE2Q86XL3 938 aa12.14□□□□□ -0.47
SEC24D-209ENST00000509818 NINLQ9Y2I6 1382 aa12.14□□□□□ -0.47
SEC24D-209ENST00000509818 SAFB2Q14151 953 aaKnown RBP eCLIP12.14□□□□□ -0.47
SEC24D-209ENST00000509818 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
SEC24D-209ENST00000509818 MED14O60244 1454 aa12.13□□□□□ -0.47
SEC24D-209ENST00000509818 ABCC11Q96J66 1382 aa12.13□□□□□ -0.47
SEC24D-209ENST00000509818 FKBP8Q14318 412 aa12.13□□□□□ -0.47
SEC24D-209ENST00000509818 NPHP4O75161 1426 aaPredicted RBP12.13□□□□□ -0.47
SEC24D-209ENST00000509818 LTKP29376 864 aa12.12□□□□□ -0.47
SEC24D-209ENST00000509818 SRPK2P78362 688 aaKnown RBP12.12□□□□□ -0.47
SEC24D-209ENST00000509818 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
SEC24D-209ENST00000509818 SETD1AO15047 1707 aaKnown RBP12.12□□□□□ -0.47
SEC24D-209ENST00000509818 NSD3Q9BZ95 1437 aa12.12□□□□□ -0.47
SEC24D-209ENST00000509818 ATAD2Q6PL18 1390 aa12.12□□□□□ -0.47
SEC24D-209ENST00000509818 ANKRD36BQ8N2N9 1353 aa12.12□□□□□ -0.47
SEC24D-209ENST00000509818 MINK1Q8N4C8 1332 aaPredicted RBP12.12□□□□□ -0.47
SEC24D-209ENST00000509818 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
SEC24D-209ENST00000509818 ARHGAP23Q9P227 1491 aa12.11□□□□□ -0.47
SEC24D-209ENST00000509818 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
SEC24D-209ENST00000509818 ANP32EQ9BTT0 268 aa12.11□□□□□ -0.47
SEC24D-209ENST00000509818 NRXN3Q9Y4C0 1643 aa12.11□□□□□ -0.47
SEC24D-209ENST00000509818 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
SEC24D-209ENST00000509818 BCANQ96GW7 911 aa12.1□□□□□ -0.47
SEC24D-209ENST00000509818 SLIT1O75093 1534 aa12.1□□□□□ -0.47
SEC24D-209ENST00000509818 USP32Q8NFA0 1604 aa12.1□□□□□ -0.47
SEC24D-209ENST00000509818 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.477e-6■■■■■ 27.3
SEC24D-209ENST00000509818 MORC1Q86VD1 984 aa12.1□□□□□ -0.47
SEC24D-209ENST00000509818 CDK19Q9BWU1 502 aa12.09□□□□□ -0.47
SEC24D-209ENST00000509818 NUDCQ9Y266 331 aa12.09□□□□□ -0.47
SEC24D-209ENST00000509818 EID1Q9Y6B2 187 aa12.09□□□□□ -0.47
SEC24D-209ENST00000509818 BLMP54132 1417 aaPredicted RBP12.09□□□□□ -0.47
SEC24D-209ENST00000509818 STRCP1A6NGW2 1772 aa12.09□□□□□ -0.47
SEC24D-209ENST00000509818 NSD2O96028 1365 aa12.09□□□□□ -0.47
SEC24D-209ENST00000509818 IQSEC2Q5JU85 1478 aa12.09□□□□□ -0.47
SEC24D-209ENST00000509818 PDE3BQ13370 1112 aa12.08□□□□□ -0.48
SEC24D-209ENST00000509818 TERF2IPQ9NYB0 399 aa12.08□□□□□ -0.48
SEC24D-209ENST00000509818 METP08581 1390 aa12.08□□□□□ -0.48
SEC24D-209ENST00000509818 PLEKHG1Q9ULL1 1385 aa12.08□□□□□ -0.48
SEC24D-209ENST00000509818 TXNDC2Q86VQ3 553 aa12.08□□□□□ -0.48
SEC24D-209ENST00000509818 ADAMTS8Q9UP79 889 aa12.08□□□□□ -0.48
SEC24D-209ENST00000509818 FAM135BQ49AJ0 1406 aa12.07□□□□□ -0.48
SEC24D-209ENST00000509818 WAPLQ7Z5K2 1190 aa12.07□□□□□ -0.48
SEC24D-209ENST00000509818 TECPR2O15040 1411 aa12.07□□□□□ -0.48
SEC24D-209ENST00000509818 PHF23Q9BUL5 403 aaPredicted RBP12.06□□□□□ -0.48
SEC24D-209ENST00000509818 KNDC1Q76NI1 1749 aa12.06□□□□□ -0.48
SEC24D-209ENST00000509818 ERICH6BQ5W0A0 696 aa12.06□□□□□ -0.48
SEC24D-209ENST00000509818 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
SEC24D-209ENST00000509818 POLR3AO14802 1390 aaPredicted RBP12.05□□□□□ -0.48
SEC24D-209ENST00000509818 PLEKHH1Q9ULM0 1364 aa12.05□□□□□ -0.48
SEC24D-209ENST00000509818 CPS1P31327 1500 aa12.05□□□□□ -0.48
SEC24D-209ENST00000509818 ADAMTS13Q76LX8 1427 aa12.05□□□□□ -0.48
SEC24D-209ENST00000509818 A0A1W2PP64 1363 aa12.04□□□□□ -0.48
SEC24D-209ENST00000509818 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
SEC24D-209ENST00000509818 WASLO00401 505 aaPredicted RBP12.04□□□□□ -0.48
SEC24D-209ENST00000509818 CABP1Q9NZU7 370 aa12.03□□□□□ -0.48
SEC24D-209ENST00000509818 LRRC7Q96NW7 1537 aa12.02□□□□□ -0.48
SEC24D-209ENST00000509818 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.48
SEC24D-209ENST00000509818 TBX22Q9Y458 520 aa12.02□□□□□ -0.48
SEC24D-209ENST00000509818 CFAP53Q96M91 514 aa12.02□□□□□ -0.49
SEC24D-209ENST00000509818 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.49
SEC24D-209ENST00000509818 SLC26A8Q96RN1 970 aa12.01□□□□□ -0.49
SEC24D-209ENST00000509818 CD163L1Q9NR16 1453 aa12.01□□□□□ -0.49
SEC24D-209ENST00000509818 ATP7BP35670 1465 aa12□□□□□ -0.49
SEC24D-209ENST00000509818 TNNT2P45379 298 aaPredicted RBP12□□□□□ -0.49
SEC24D-209ENST00000509818 NGEFQ8N5V2 710 aa12□□□□□ -0.49
SEC24D-209ENST00000509818 FYB1O15117 783 aa12□□□□□ -0.49
SEC24D-209ENST00000509818 MTHFSP49914 203 aa12□□□□□ -0.49
SEC24D-209ENST00000509818 RNF123Q5XPI4 1314 aa11.99□□□□□ -0.49
SEC24D-209ENST00000509818 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
SEC24D-209ENST00000509818 PIP4K2BP78356 416 aa11.98□□□□□ -0.49
SEC24D-209ENST00000509818 NUDT16Q96DE0 195 aaKnown RBP11.98□□□□□ -0.49
SEC24D-209ENST00000509818 TSHZ2Q9NRE2 1034 aa11.98□□□□□ -0.49
SEC24D-209ENST00000509818 CCDC61Q9Y6R9 512 aa11.98□□□□□ -0.49
SEC24D-209ENST00000509818 ROBO2Q9HCK4 1378 aa11.98□□□□□ -0.49
SEC24D-209ENST00000509818 ANKRD26Q9UPS8 1709 aa11.98□□□□□ -0.49
SEC24D-209ENST00000509818 XIRP1Q702N8 1843 aaKnown RBP11.98□□□□□ -0.49
SEC24D-209ENST00000509818 RBM33Q96EV2 1170 aaKnown RBP11.97□□□□□ -0.49
SEC24D-209ENST00000509818 GGNBP2Q9H3C7 697 aa11.97□□□□□ -0.49
SEC24D-209ENST00000509818 IRX6P78412 446 aaPredicted RBP11.97□□□□□ -0.49
SEC24D-209ENST00000509818 AMOTL2Q9Y2J4 779 aa11.97□□□□□ -0.49
SEC24D-209ENST00000509818 PPIP5K1Q6PFW1 1433 aa11.97□□□□□ -0.49
SEC24D-209ENST00000509818 CPSF1Q10570 1443 aaKnown RBP11.96□□□□□ -0.49
SEC24D-209ENST00000509818 PTPRUQ92729 1446 aa11.96□□□□□ -0.49
SEC24D-209ENST00000509818 BCL11AQ9H165 835 aa11.96□□□□□ -0.49
SEC24D-209ENST00000509818 ADGRB2O60241 1585 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms