RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 OATP04181 439 aa8.59□□□□□ -1.03
OTUD4-207ENST00000509517 VEGFBP49765 207 aa8.59□□□□□ -1.03
OTUD4-207ENST00000509517 RDH13Q8NBN7 331 aa8.59□□□□□ -1.03
OTUD4-207ENST00000509517 ARHGEF1Q92888 912 aaKnown RBP8.59□□□□□ -1.03
OTUD4-207ENST00000509517 SENP2Q9HC62 589 aa8.59□□□□□ -1.03
OTUD4-207ENST00000509517 FCHSD2O94868 740 aa8.58□□□□□ -1.04
OTUD4-207ENST00000509517 TRIM32Q13049 653 aa8.58□□□□□ -1.04
OTUD4-207ENST00000509517 KCNV2Q8TDN2 545 aa8.58□□□□□ -1.04
OTUD4-207ENST00000509517 DDX11L8A8MPP1 907 aa8.57□□□□□ -1.04
OTUD4-207ENST00000509517 RSPH4AQ5TD94 716 aa8.57□□□□□ -1.04
OTUD4-207ENST00000509517 ZSCAN1Q8NBB4 408 aa8.57□□□□□ -1.04
OTUD4-207ENST00000509517 SLC24A1O60721 1099 aa8.55□□□□□ -1.04
OTUD4-207ENST00000509517 GCGRP47871 477 aa8.55□□□□□ -1.04
OTUD4-207ENST00000509517 SKOR1P84550 965 aa8.55□□□□□ -1.04
OTUD4-207ENST00000509517 NXF1Q9UBU9 619 aaKnown RBP8.55□□□□□ -1.04
OTUD4-207ENST00000509517 DAXXQ9UER7 740 aaPredicted RBP8.55□□□□□ -1.04
OTUD4-207ENST00000509517 SALL2Q9Y467 1007 aaPredicted RBP8.55□□□□□ -1.04
OTUD4-207ENST00000509517 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
OTUD4-207ENST00000509517 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
OTUD4-207ENST00000509517 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
OTUD4-207ENST00000509517 MSS51Q4VC12 460 aa8.54□□□□□ -1.04
OTUD4-207ENST00000509517 KIFC2Q96AC6 838 aa8.53□□□□□ -1.04
OTUD4-207ENST00000509517 PHOX2BQ99453 314 aa8.53□□□□□ -1.04
OTUD4-207ENST00000509517 BMP1P13497 986 aa8.52□□□□□ -1.05
OTUD4-207ENST00000509517 RC3H1Q5TC82 1133 aaKnown RBP8.52□□□□□ -1.05
OTUD4-207ENST00000509517 TRIM46Q7Z4K8 759 aa8.52□□□□□ -1.05
OTUD4-207ENST00000509517 SLC16A10Q8TF71 515 aa8.52□□□□□ -1.05
OTUD4-207ENST00000509517 SEMA3EO15041 775 aa8.51□□□□□ -1.05
OTUD4-207ENST00000509517 TSHZ2Q9NRE2 1034 aa8.51□□□□□ -1.05
OTUD4-207ENST00000509517 FAM181BA6NEQ2 426 aa8.5□□□□□ -1.05
OTUD4-207ENST00000509517 MMP16P51512 607 aa8.5□□□□□ -1.05
OTUD4-207ENST00000509517 H3BM21 787 aa8.47□□□□□ -1.05
OTUD4-207ENST00000509517 ALDH1A1P00352 501 aa8.47□□□□□ -1.05
OTUD4-207ENST00000509517 HIC1Q14526 733 aa8.47□□□□□ -1.05
OTUD4-207ENST00000509517 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
OTUD4-207ENST00000509517 IRF7Q92985 503 aa8.47□□□□□ -1.05
OTUD4-207ENST00000509517 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
OTUD4-207ENST00000509517 HLA-CQ95604 372 aa8.46□□□□□ -1.06
OTUD4-207ENST00000509517 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
OTUD4-207ENST00000509517 GPR37O15354 613 aa8.44□□□□□ -1.06
OTUD4-207ENST00000509517 SIAH2O43255 324 aa8.44□□□□□ -1.06
OTUD4-207ENST00000509517 REPIN1Q9BWE0 567 aaKnown RBP8.44□□□□□ -1.06
OTUD4-207ENST00000509517 GSK3AP49840 483 aa8.43□□□□□ -1.06
OTUD4-207ENST00000509517 CAPN5O15484 640 aaPredicted RBP8.42□□□□□ -1.06
OTUD4-207ENST00000509517 PTCRAQ6ISU1 281 aaPredicted RBP8.42□□□□□ -1.06
OTUD4-207ENST00000509517 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
OTUD4-207ENST00000509517 GNPATO15228 680 aa8.41□□□□□ -1.06
OTUD4-207ENST00000509517 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
OTUD4-207ENST00000509517 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
OTUD4-207ENST00000509517 KCTD17Q8N5Z5 321 aa8.41□□□□□ -1.06
OTUD4-207ENST00000509517 SOBPA7XYQ1 873 aa8.4□□□□□ -1.06
OTUD4-207ENST00000509517 WNT7BP56706 349 aa8.4□□□□□ -1.06
OTUD4-207ENST00000509517 ZFP42Q96MM3 310 aa8.4□□□□□ -1.06
OTUD4-207ENST00000509517 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
OTUD4-207ENST00000509517 Q3C1V9 767 aa8.38□□□□□ -1.07
OTUD4-207ENST00000509517 SULF1Q8IWU6 871 aa8.38□□□□□ -1.07
OTUD4-207ENST00000509517 SYMPKQ92797 1274 aaKnown RBP8.37□□□□□ -1.07
OTUD4-207ENST00000509517 GUCA2AQ02747 115 aa8.36□□□□□ -1.07
OTUD4-207ENST00000509517 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
OTUD4-207ENST00000509517 CD46P15529 392 aa8.35□□□□□ -1.07
OTUD4-207ENST00000509517 WASF2Q9Y6W5 498 aa8.34□□□□□ -1.07
OTUD4-207ENST00000509517 SH3BP2P78314 561 aa8.33□□□□□ -1.08
OTUD4-207ENST00000509517 KCNMA1Q12791 1236 aa8.33□□□□□ -1.08
OTUD4-207ENST00000509517 EHBP1Q8NDI1 1231 aa8.33□□□□□ -1.08
OTUD4-207ENST00000509517 KDM4AO75164 1064 aa8.32□□□□□ -1.08
OTUD4-207ENST00000509517 TESPA1A2RU30 521 aaPredicted RBP8.31□□□□□ -1.08
OTUD4-207ENST00000509517 JUNDP17535 347 aa8.3□□□□□ -1.08
OTUD4-207ENST00000509517 PURBQ96QR8 312 aaKnown RBP8.3□□□□□ -1.08
OTUD4-207ENST00000509517 TLL2Q9Y6L7 1015 aa8.3□□□□□ -1.08
OTUD4-207ENST00000509517 VSIG8P0DPA2 414 aa8.29□□□□□ -1.08
OTUD4-207ENST00000509517 MRPL14Q6P1L8 145 aaKnown RBP8.28□□□□□ -1.08
OTUD4-207ENST00000509517 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
OTUD4-207ENST00000509517 HOXA2O43364 376 aa8.27□□□□□ -1.09
OTUD4-207ENST00000509517 TIMP2P16035 220 aa8.25□□□□□ -1.09
OTUD4-207ENST00000509517 RASSF7Q02833 373 aa8.25□□□□□ -1.09
OTUD4-207ENST00000509517 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
OTUD4-207ENST00000509517 GDF11O95390 407 aa8.24□□□□□ -1.09
OTUD4-207ENST00000509517 KRT76Q01546 638 aa8.24□□□□□ -1.09
OTUD4-207ENST00000509517 NNTQ13423 1086 aa8.24□□□□□ -1.09
OTUD4-207ENST00000509517 TMEM151AQ8N4L1 468 aa8.24□□□□□ -1.09
OTUD4-207ENST00000509517 BAP1Q92560 729 aa8.24□□□□□ -1.09
OTUD4-207ENST00000509517 KLF16Q9BXK1 252 aaPredicted RBP8.24□□□□□ -1.09
OTUD4-207ENST00000509517 GPR161Q8N6U8 529 aaKnown RBP8.23□□□□□ -1.09
OTUD4-207ENST00000509517 PPFIA3O75145 1194 aa8.22□□□□□ -1.09
OTUD4-207ENST00000509517 WDR4P57081 412 aaKnown RBP8.22□□□□□ -1.09
OTUD4-207ENST00000509517 MDM2Q00987 491 aaPredicted RBP8.22□□□□□ -1.09
OTUD4-207ENST00000509517 USP46P62068 366 aa8.21□□□□□ -1.1
OTUD4-207ENST00000509517 SCARF1Q14162 830 aa8.21□□□□□ -1.1
OTUD4-207ENST00000509517 PCDHGC3Q9UN70 934 aa8.21□□□□□ -1.1
OTUD4-207ENST00000509517 P3H3Q8IVL6 736 aa8.2□□□□□ -1.1
OTUD4-207ENST00000509517 UNC93B1Q9H1C4 597 aa8.2□□□□□ -1.1
OTUD4-207ENST00000509517 ZFAND3Q9H8U3 227 aa8.2□□□□□ -1.1
OTUD4-207ENST00000509517 ADAMTS8Q9UP79 889 aa8.2□□□□□ -1.1
OTUD4-207ENST00000509517 RETREG3Q86VR2 466 aa8.19□□□□□ -1.1
OTUD4-207ENST00000509517 C6orf118Q5T5N4 469 aa8.18□□□□□ -1.1
OTUD4-207ENST00000509517 EVA1BQ9NVM1 165 aa8.18□□□□□ -1.1
OTUD4-207ENST00000509517 CCNYL3P0C7X3 344 aa8.17□□□□□ -1.1
OTUD4-207ENST00000509517 SMYD5Q6GMV2 418 aa8.17□□□□□ -1.1
OTUD4-207ENST00000509517 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
OTUD4-207ENST00000509517 CNTNAP3Q9BZ76 1288 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms