RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RALGAPBQ86X10 1494 aa14.5□□□□□ -0.09
NEDD9-211ENST00000508546 NUP155O75694 1391 aa14.49□□□□□ -0.09
NEDD9-211ENST00000508546 METP08581 1390 aa14.48□□□□□ -0.09
NEDD9-211ENST00000508546 YY1P25490 414 aa14.48□□□□□ -0.09
NEDD9-211ENST00000508546 SOS2Q07890 1332 aaPredicted RBP14.47□□□□□ -0.09
NEDD9-211ENST00000508546 GJD4Q96KN9 370 aaPredicted RBP14.47□□□□□ -0.09
NEDD9-211ENST00000508546 NEXMIFQ5QGS0 1516 aa14.46□□□□□ -0.1
NEDD9-211ENST00000508546 KIF1BO60333 1816 aa14.45□□□□□ -0.1
NEDD9-211ENST00000508546 SF3B2Q13435 895 aaKnown RBP14.43□□□□□ -0.1
NEDD9-211ENST00000508546 ZNF326Q5BKZ1 582 aaKnown RBP14.43□□□□□ -0.1
NEDD9-211ENST00000508546 CLTCL1P53675 1640 aa14.43□□□□□ -0.1
NEDD9-211ENST00000508546 SLIT2O94813 1529 aa14.42□□□□□ -0.1
NEDD9-211ENST00000508546 IFFO2Q5TF58 517 aa14.41□□□□□ -0.1
NEDD9-211ENST00000508546 PXDNQ92626 1479 aa14.41□□□□□ -0.1
NEDD9-211ENST00000508546 PRAG1Q86YV5 1406 aa14.41□□□□□ -0.1
NEDD9-211ENST00000508546 RGPD1P0DJD0 1748 aa14.4□□□□□ -0.1
NEDD9-211ENST00000508546 TNS1Q9HBL0 1735 aaKnown RBP14.39□□□□□ -0.11
NEDD9-211ENST00000508546 ORAI2Q96SN7 254 aa14.39□□□□□ -0.11
NEDD9-211ENST00000508546 USP32Q8NFA0 1604 aa14.39□□□□□ -0.11
NEDD9-211ENST00000508546 PLCH1Q4KWH8 1693 aa14.38□□□□□ -0.11
NEDD9-211ENST00000508546 R3HDM1Q15032 1099 aaKnown RBP14.37□□□□□ -0.11
NEDD9-211ENST00000508546 ROBO2Q9HCK4 1378 aa14.36□□□□□ -0.11
NEDD9-211ENST00000508546 SEPT12Q8IYM1 358 aa14.36□□□□□ -0.11
NEDD9-211ENST00000508546 VGFO15240 615 aaPredicted RBP14.35□□□□□ -0.11
NEDD9-211ENST00000508546 BAG6P46379 1132 aa14.35□□□□□ -0.11
NEDD9-211ENST00000508546 UNC5CLQ8IV45 518 aa14.35□□□□□ -0.11
NEDD9-211ENST00000508546 PPLO60437 1756 aa14.34□□□□□ -0.11
NEDD9-211ENST00000508546 HFM1A2PYH4 1435 aa14.34□□□□□ -0.11
NEDD9-211ENST00000508546 CAMTA1Q9Y6Y1 1673 aa14.34□□□□□ -0.11
NEDD9-211ENST00000508546 ITGAEP38570 1179 aa14.34□□□□□ -0.11
NEDD9-211ENST00000508546 NWD2Q9ULI1 1742 aa14.33□□□□□ -0.12
NEDD9-211ENST00000508546 CDC42BPGQ6DT37 1551 aa14.33□□□□□ -0.12
NEDD9-211ENST00000508546 DISP2A7MBM2 1401 aa14.32□□□□□ -0.12
NEDD9-211ENST00000508546 NPHP3Q7Z494 1330 aa14.32□□□□□ -0.12
NEDD9-211ENST00000508546 ABCA3Q99758 1704 aa14.32□□□□□ -0.12
NEDD9-211ENST00000508546 EN1Q05925 392 aaPredicted RBP14.31□□□□□ -0.12
NEDD9-211ENST00000508546 KRT27Q7Z3Y8 459 aa14.31□□□□□ -0.12
NEDD9-211ENST00000508546 RPGRIP1LQ68CZ1 1315 aa14.31□□□□□ -0.12
NEDD9-211ENST00000508546 XPCQ01831 940 aaPredicted RBP14.3□□□□□ -0.12
NEDD9-211ENST00000508546 NRAPQ86VF7 1730 aa14.29□□□□□ -0.12
NEDD9-211ENST00000508546 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
NEDD9-211ENST00000508546 ADGRB2O60241 1585 aa14.29□□□□□ -0.12
NEDD9-211ENST00000508546 RREB1Q92766 1687 aa14.29□□□□□ -0.12
NEDD9-211ENST00000508546 NUP188Q5SRE5 1749 aa14.27□□□□□ -0.12
NEDD9-211ENST00000508546 NAIPQ13075 1403 aa14.27□□□□□ -0.12
NEDD9-211ENST00000508546 VPS72Q15906 364 aa14.27□□□□□ -0.13
NEDD9-211ENST00000508546 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.13
NEDD9-211ENST00000508546 LRPPRCP42704 1394 aaKnown RBP14.26□□□□□ -0.13
NEDD9-211ENST00000508546 ONECUT3O60422 494 aaPredicted RBP14.26□□□□□ -0.13
NEDD9-211ENST00000508546 KNDC1Q76NI1 1749 aa14.25□□□□□ -0.13
NEDD9-211ENST00000508546 FOXO3O43524 673 aa14.25□□□□□ -0.13
NEDD9-211ENST00000508546 TECPR2O15040 1411 aa14.24□□□□□ -0.13
NEDD9-211ENST00000508546 FMN2Q9NZ56 1722 aa14.24□□□□□ -0.13
NEDD9-211ENST00000508546 KIF1AQ12756 1690 aa14.24□□□□□ -0.13
NEDD9-211ENST00000508546 THSD7AQ9UPZ6 1657 aa14.23□□□□□ -0.13
NEDD9-211ENST00000508546 NINLQ9Y2I6 1382 aa14.23□□□□□ -0.13
NEDD9-211ENST00000508546 ZNF784Q8NCA9 323 aaPredicted RBP14.23□□□□□ -0.13
NEDD9-211ENST00000508546 IFT172Q9UG01 1749 aa14.23□□□□□ -0.13
NEDD9-211ENST00000508546 A0A0G2JS52 829 aa14.22□□□□□ -0.13
NEDD9-211ENST00000508546 MYT1Q01538 1121 aa14.22□□□□□ -0.13
NEDD9-211ENST00000508546 EZH2Q15910 746 aaKnown RBP14.22□□□□□ -0.13
NEDD9-211ENST00000508546 FAM182BQ5T319 152 aa14.22□□□□□ -0.13
NEDD9-211ENST00000508546 CCDC9Q9Y3X0 531 aaKnown RBP14.22□□□□□ -0.13
NEDD9-211ENST00000508546 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
NEDD9-211ENST00000508546 RGPD8O14715 1765 aaPredicted RBP14.22□□□□□ -0.13
NEDD9-211ENST00000508546 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
NEDD9-211ENST00000508546 CCDC144AA2RUR9 1427 aa14.2□□□□□ -0.14
NEDD9-211ENST00000508546 ABCC11Q96J66 1382 aa14.2□□□□□ -0.14
NEDD9-211ENST00000508546 UTRNP46939 3433 aa14.19□□□□□ -0.14
NEDD9-211ENST00000508546 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
NEDD9-211ENST00000508546 ADGRF5Q8IZF2 1346 aa14.18□□□□□ -0.14
NEDD9-211ENST00000508546 TNS3Q68CZ2 1445 aa14.18□□□□□ -0.14
NEDD9-211ENST00000508546 FAM98CQ17RN3 349 aaKnown RBP14.18□□□□□ -0.14
NEDD9-211ENST00000508546 WAPLQ7Z5K2 1190 aa14.18□□□□□ -0.14
NEDD9-211ENST00000508546 NRKQ7Z2Y5 1582 aa14.17□□□□□ -0.14
NEDD9-211ENST00000508546 NUTM2FA1L443 756 aa14.17□□□□□ -0.14
NEDD9-211ENST00000508546 PPARGC1BQ86YN6 1023 aaKnown RBP14.17□□□□□ -0.14
NEDD9-211ENST00000508546 CAMKK2Q96RR4 588 aa14.17□□□□□ -0.14
NEDD9-211ENST00000508546 ANKRD30BQ9BXX2 1392 aa14.17□□□□□ -0.14
NEDD9-211ENST00000508546 CEP350Q5VT06 3117 aa14.16□□□□□ -0.14
NEDD9-211ENST00000508546 C1QTNF8P60827 252 aa14.16□□□□□ -0.14
NEDD9-211ENST00000508546 STK26Q9P289 416 aa14.16□□□□□ -0.14
NEDD9-211ENST00000508546 PPP1R1BQ9UD71 204 aaPredicted RBP14.16□□□□□ -0.14
NEDD9-211ENST00000508546 PLEKHH1Q9ULM0 1364 aa14.16□□□□□ -0.14
NEDD9-211ENST00000508546 SPATA31E1Q6ZUB1 1445 aa14.15□□□□□ -0.14
NEDD9-211ENST00000508546 PARD3Q8TEW0 1356 aa14.15□□□□□ -0.14
NEDD9-211ENST00000508546 KRT28Q7Z3Y7 464 aa14.15□□□□□ -0.14
NEDD9-211ENST00000508546 CABLES1Q8TDN4 633 aa14.15□□□□□ -0.14
NEDD9-211ENST00000508546 PIK3C2GO75747 1445 aa14.15□□□□□ -0.14
NEDD9-211ENST00000508546 MYOM1P52179 1685 aa14.14□□□□□ -0.15
NEDD9-211ENST00000508546 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
NEDD9-211ENST00000508546 SIRT1Q96EB6 747 aa14.14□□□□□ -0.15
NEDD9-211ENST00000508546 YTHDC2Q9H6S0 1430 aaKnown RBP14.14□□□□□ -0.15
NEDD9-211ENST00000508546 CASZ1Q86V15 1759 aa14.14□□□□□ -0.15
NEDD9-211ENST00000508546 CHD4Q14839 1912 aa14.13□□□□□ -0.15
NEDD9-211ENST00000508546 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
NEDD9-211ENST00000508546 HAP1P54257 671 aaPredicted RBP14.13□□□□□ -0.15
NEDD9-211ENST00000508546 TMEM132EQ6IEE7 984 aa14.13□□□□□ -0.15
NEDD9-211ENST00000508546 SBNO1A3KN83 1393 aa14.12□□□□□ -0.15
NEDD9-211ENST00000508546 COL14A1Q05707 1796 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms