RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 COL22A1Q8NFW1 1626 aaPredicted RBP34.63■■■■□ 3.13
CALCOCO2-209ENST00000507076 MARF1Q9Y4F3 1742 aaKnown RBP34.58■■■■□ 3.13
CALCOCO2-209ENST00000507076 ADGRF5Q8IZF2 1346 aa34.56■■■■□ 3.12
CALCOCO2-209ENST00000507076 CCDC144AA2RUR9 1427 aa34.55■■■■□ 3.12
CALCOCO2-209ENST00000507076 KNDC1Q76NI1 1749 aa34.55■■■■□ 3.12
CALCOCO2-209ENST00000507076 ESCO1Q5FWF5 840 aa34.53■■■■□ 3.12
CALCOCO2-209ENST00000507076 USP21Q9UK80 565 aa34.53■■■■□ 3.12
CALCOCO2-209ENST00000507076 RGL3Q3MIN7 710 aa34.52■■■■□ 3.12
CALCOCO2-209ENST00000507076 PXDNQ92626 1479 aa34.52■■■■□ 3.12
CALCOCO2-209ENST00000507076 STK26Q9P289 416 aa34.51■■■■□ 3.12
CALCOCO2-209ENST00000507076 SPATA31E1Q6ZUB1 1445 aa34.5■■■■□ 3.11
CALCOCO2-209ENST00000507076 MYOM2P54296 1465 aa34.5■■■■□ 3.11
CALCOCO2-209ENST00000507076 NPHP3Q7Z494 1330 aa34.5■■■■□ 3.11
CALCOCO2-209ENST00000507076 XPCQ01831 940 aaPredicted RBP34.48■■■■□ 3.11
CALCOCO2-209ENST00000507076 TECPR2O15040 1411 aa34.47■■■■□ 3.11
CALCOCO2-209ENST00000507076 FMN2Q9NZ56 1722 aa34.47■■■■□ 3.11
CALCOCO2-209ENST00000507076 NUTM2FA1L443 756 aa34.47■■■■□ 3.11
CALCOCO2-209ENST00000507076 WAPLQ7Z5K2 1190 aa34.47■■■■□ 3.11
CALCOCO2-209ENST00000507076 TRPC5Q9UL62 973 aaPredicted RBP34.47■■■■□ 3.11
CALCOCO2-209ENST00000507076 FNBP4Q8N3X1 1017 aaPredicted RBP34.45■■■■□ 3.11
CALCOCO2-209ENST00000507076 LRPPRCP42704 1394 aaKnown RBP34.45■■■■□ 3.11
CALCOCO2-209ENST00000507076 ATRNO75882 1429 aa34.45■■■■□ 3.11
CALCOCO2-209ENST00000507076 FOXO3O43524 673 aa34.44■■■■□ 3.1
CALCOCO2-209ENST00000507076 ANKRD30BQ9BXX2 1392 aa34.44■■■■□ 3.1
CALCOCO2-209ENST00000507076 PLEKHH1Q9ULM0 1364 aa34.44■■■■□ 3.1
CALCOCO2-209ENST00000507076 RGPD8O14715 1765 aaPredicted RBP34.42■■■■□ 3.1
CALCOCO2-209ENST00000507076 ATAD2Q6PL18 1390 aa34.42■■■■□ 3.1
CALCOCO2-209ENST00000507076 TMEM132EQ6IEE7 984 aa34.42■■■■□ 3.1
CALCOCO2-209ENST00000507076 PIK3C2GO75747 1445 aa34.41■■■■□ 3.1
CALCOCO2-209ENST00000507076 MPHOSPH9Q99550 1183 aa34.41■■■■□ 3.1
CALCOCO2-209ENST00000507076 KIF1AQ12756 1690 aa34.41■■■■□ 3.1
CALCOCO2-209ENST00000507076 ABCC11Q96J66 1382 aa34.38■■■■□ 3.09
CALCOCO2-209ENST00000507076 BCL9LQ86UU0 1499 aa34.36■■■■□ 3.09
CALCOCO2-209ENST00000507076 YTHDC2Q9H6S0 1430 aaKnown RBP34.36■■■■□ 3.09
CALCOCO2-209ENST00000507076 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.35■■■■□ 3.09
CALCOCO2-209ENST00000507076 USP32Q8NFA0 1604 aa34.28■■■■□ 3.08
CALCOCO2-209ENST00000507076 SPATA31A3Q5VYP0 1347 aa34.26■■■■□ 3.07
CALCOCO2-209ENST00000507076 GLI3P10071 1580 aa34.24■■■■□ 3.07
CALCOCO2-209ENST00000507076 EP400Q96L91 3159 aa34.24■■■■□ 3.07
CALCOCO2-209ENST00000507076 NRXN1Q9ULB1 1477 aa34.23■■■■□ 3.07
CALCOCO2-209ENST00000507076 GJD4Q96KN9 370 aaPredicted RBP34.23■■■■□ 3.07
CALCOCO2-209ENST00000507076 ABCA3Q99758 1704 aa34.23■■■■□ 3.07
CALCOCO2-209ENST00000507076 BRWD3Q6RI45 1802 aa34.23■■■■□ 3.07
CALCOCO2-209ENST00000507076 SLIT2O94813 1529 aa34.21■■■■□ 3.07
CALCOCO2-209ENST00000507076 KRT28Q7Z3Y7 464 aa34.21■■■■□ 3.07
CALCOCO2-209ENST00000507076 C14orf93Q9H972 538 aaKnown RBP34.21■■■■□ 3.07
CALCOCO2-209ENST00000507076 PLCH1Q4KWH8 1693 aa34.2■■■■□ 3.07
CALCOCO2-209ENST00000507076 CFAP70Q5T0N1 1121 aa34.19■■■■□ 3.06
CALCOCO2-209ENST00000507076 RALGAPBQ86X10 1494 aa34.19■■■■□ 3.06
CALCOCO2-209ENST00000507076 TNS3Q68CZ2 1445 aa34.18■■■■□ 3.06
CALCOCO2-209ENST00000507076 DHX57Q6P158 1386 aaKnown RBP34.17■■■■□ 3.06
CALCOCO2-209ENST00000507076 UNC5CLQ8IV45 518 aa34.17■■■■□ 3.06
CALCOCO2-209ENST00000507076 SIRT1Q96EB6 747 aa34.17■■■■□ 3.06
CALCOCO2-209ENST00000507076 PHF8Q9UPP1 1060 aa34.17■■■■□ 3.06
CALCOCO2-209ENST00000507076 SAFB2Q14151 953 aaKnown RBP eCLIP34.16■■■■□ 3.06
CALCOCO2-209ENST00000507076 PLEKHG5O94827 1062 aa34.15■■■■□ 3.06
CALCOCO2-209ENST00000507076 NWD2Q9ULI1 1742 aa34.13■■■■□ 3.05
CALCOCO2-209ENST00000507076 HAP1P54257 671 aaPredicted RBP34.13■■■■□ 3.05
CALCOCO2-209ENST00000507076 PRAM1Q96QH2 718 aa34.13■■■■□ 3.05
CALCOCO2-209ENST00000507076 CABLES1Q8TDN4 633 aa34.12■■■■□ 3.05
CALCOCO2-209ENST00000507076 DLC1Q96QB1 1528 aa34.1■■■■□ 3.05
CALCOCO2-209ENST00000507076 PSME1Q06323 249 aa34.09■■■■□ 3.05
CALCOCO2-209ENST00000507076 ZRANB1Q9UGI0 708 aa34.09■■■■□ 3.05
CALCOCO2-209ENST00000507076 ADGRB2O60241 1585 aa34.09■■■■□ 3.05
CALCOCO2-209ENST00000507076 CCDC125Q86Z20 511 aa34.08■■■■□ 3.05
CALCOCO2-209ENST00000507076 LMOD2Q6P5Q4 547 aa34.07■■■■□ 3.04
CALCOCO2-209ENST00000507076 SBNO1A3KN83 1393 aa34.06■■■■□ 3.04
CALCOCO2-209ENST00000507076 ACIN1Q9UKV3 1341 aaKnown RBP34.05■■■■□ 3.04
CALCOCO2-209ENST00000507076 TRPM3Q9HCF6 1732 aaPredicted RBP34.05■■■■□ 3.04
CALCOCO2-209ENST00000507076 POGKQ9P215 609 aa34.05■■■■□ 3.04
CALCOCO2-209ENST00000507076 ADGRB1O14514 1584 aa34.05■■■■□ 3.04
CALCOCO2-209ENST00000507076 RAB3GAP2Q9H2M9 1393 aa34.03■■■■□ 3.04
CALCOCO2-209ENST00000507076 PMFBP1Q8TBY8 1022 aa34.03■■■■□ 3.04
CALCOCO2-209ENST00000507076 ANKARQ7Z5J8 1434 aa34.03■■■■□ 3.04
CALCOCO2-209ENST00000507076 ARHGEF10O15013 1369 aa34.02■■■■□ 3.04
CALCOCO2-209ENST00000507076 SRCAPQ6ZRS2 3230 aa34.02■■■■□ 3.04
CALCOCO2-209ENST00000507076 BLMP54132 1417 aaPredicted RBP34.01■■■■□ 3.03
CALCOCO2-209ENST00000507076 NRAPQ86VF7 1730 aa34.01■■■■□ 3.03
CALCOCO2-209ENST00000507076 ALS2Q96Q42 1657 aa33.99■■■■□ 3.03
CALCOCO2-209ENST00000507076 VPS72Q15906 364 aa33.99■■■■□ 3.03
CALCOCO2-209ENST00000507076 SEPT12Q8IYM1 358 aa33.99■■■■□ 3.03
CALCOCO2-209ENST00000507076 CCDC9Q9Y3X0 531 aaKnown RBP33.99■■■■□ 3.03
CALCOCO2-209ENST00000507076 HIRIP3Q9BW71 556 aaPredicted RBP33.97■■■■□ 3.03
CALCOCO2-209ENST00000507076 TRAK1Q9UPV9 953 aa33.97■■■■□ 3.03
CALCOCO2-209ENST00000507076 MINK1Q8N4C8 1332 aaPredicted RBP33.94■■■■□ 3.02
CALCOCO2-209ENST00000507076 TULP4Q9NRJ4 1543 aa33.93■■■■□ 3.02
CALCOCO2-209ENST00000507076 DEFB132Q7Z7B7 95 aa33.92■■■■□ 3.02
CALCOCO2-209ENST00000507076 CRYBG1Q9Y4K1 1723 aa33.92■■■■□ 3.02
CALCOCO2-209ENST00000507076 COL14A1Q05707 1796 aaKnown RBP33.91■■■■□ 3.02
CALCOCO2-209ENST00000507076 FAM83GA6ND36 823 aa33.91■■■■□ 3.02
CALCOCO2-209ENST00000507076 KDM2AQ9Y2K7 1162 aa33.91■■■■□ 3.02
CALCOCO2-209ENST00000507076 PRR36Q9H6K5 1346 aa33.9■■■■□ 3.02
CALCOCO2-209ENST00000507076 ARHGEF28Q8N1W1 1705 aaKnown RBP33.9■■■■□ 3.02
CALCOCO2-209ENST00000507076 ITSN1Q15811 1721 aa33.88■■■■□ 3.01
CALCOCO2-209ENST00000507076 EIF3AQ14152 1382 aaKnown RBP33.87■■■■□ 3.01
CALCOCO2-209ENST00000507076 GPRASP1Q5JY77 1395 aa33.87■■■■□ 3.01
CALCOCO2-209ENST00000507076 SF3B2Q13435 895 aaKnown RBP33.87■■■■□ 3.01
CALCOCO2-209ENST00000507076 DCAF11Q8TEB1 546 aa33.87■■■■□ 3.01
CALCOCO2-209ENST00000507076 A0A0G2JS52 829 aa33.86■■■■□ 3.01
CALCOCO2-209ENST00000507076 ONECUT3O60422 494 aaPredicted RBP33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms