RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
LIN54-206ENST00000506560 METP08581 1390 aa16.36■□□□□ 0.21
LIN54-206ENST00000506560 NRXN3Q9Y4C0 1643 aa16.36■□□□□ 0.21
LIN54-206ENST00000506560 SMG6Q86US8 1419 aaKnown RBP16.36■□□□□ 0.21
LIN54-206ENST00000506560 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
LIN54-206ENST00000506560 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
LIN54-206ENST00000506560 BLMP54132 1417 aaPredicted RBP16.34■□□□□ 0.21
LIN54-206ENST00000506560 LTKP29376 864 aa16.32■□□□□ 0.2
LIN54-206ENST00000506560 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
LIN54-206ENST00000506560 TXNDC2Q86VQ3 553 aa16.32■□□□□ 0.2
LIN54-206ENST00000506560 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
LIN54-206ENST00000506560 UBR1Q8IWV7 1749 aa16.31■□□□□ 0.2
LIN54-206ENST00000506560 CDK19Q9BWU1 502 aa16.31■□□□□ 0.2
LIN54-206ENST00000506560 WDR43Q15061 677 aaKnown RBP eCLIP16.3■□□□□ 0.2
LIN54-206ENST00000506560 MORC1Q86VD1 984 aa16.3■□□□□ 0.2
LIN54-206ENST00000506560 ANKRD36BQ8N2N9 1353 aa16.3■□□□□ 0.2
LIN54-206ENST00000506560 TMEM2Q9UHN6 1383 aa16.3■□□□□ 0.2
LIN54-206ENST00000506560 C3P01024 1663 aa16.28■□□□□ 0.2
LIN54-206ENST00000506560 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
LIN54-206ENST00000506560 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
LIN54-206ENST00000506560 CABP1Q9NZU7 370 aa16.27■□□□□ 0.2
LIN54-206ENST00000506560 GGNBP2Q9H3C7 697 aa16.27■□□□□ 0.2
LIN54-206ENST00000506560 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.19
LIN54-206ENST00000506560 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
LIN54-206ENST00000506560 PUS7Q96PZ0 661 aaKnown RBP16.26■□□□□ 0.19
LIN54-206ENST00000506560 FER1L4A9Z1Z3 1794 aa16.26■□□□□ 0.19
LIN54-206ENST00000506560 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
LIN54-206ENST00000506560 ABCC11Q96J66 1382 aa16.25■□□□□ 0.19
LIN54-206ENST00000506560 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
LIN54-206ENST00000506560 MTHFSP49914 203 aa16.24■□□□□ 0.19
LIN54-206ENST00000506560 ATAD2Q6PL18 1390 aa16.23■□□□□ 0.19
LIN54-206ENST00000506560 DLC1Q96QB1 1528 aa16.23■□□□□ 0.19
LIN54-206ENST00000506560 APAF1O14727 1248 aa16.22■□□□□ 0.19
LIN54-206ENST00000506560 FBLN1P23142 703 aa16.22■□□□□ 0.19
LIN54-206ENST00000506560 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
LIN54-206ENST00000506560 ROBO2Q9HCK4 1378 aa16.22■□□□□ 0.19
LIN54-206ENST00000506560 FYB1O15117 783 aa16.21■□□□□ 0.19
LIN54-206ENST00000506560 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.19
LIN54-206ENST00000506560 RNF123Q5XPI4 1314 aa16.21■□□□□ 0.19
LIN54-206ENST00000506560 INSRP06213 1382 aa16.21■□□□□ 0.19
LIN54-206ENST00000506560 POLR3AO14802 1390 aaPredicted RBP16.2■□□□□ 0.18
LIN54-206ENST00000506560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.185e-6■■■□□ 15.5
LIN54-206ENST00000506560 NLRP1Q9C000 1473 aa16.2■□□□□ 0.18
LIN54-206ENST00000506560 SHPRHQ149N8 1683 aa16.2■□□□□ 0.18
LIN54-206ENST00000506560 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
LIN54-206ENST00000506560 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
LIN54-206ENST00000506560 WASLO00401 505 aaPredicted RBP16.19■□□□□ 0.18
LIN54-206ENST00000506560 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
LIN54-206ENST00000506560 HDGFP51858 240 aaKnown RBP16.19■□□□□ 0.18
LIN54-206ENST00000506560 TERF2IPQ9NYB0 399 aa16.19■□□□□ 0.18
LIN54-206ENST00000506560 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
LIN54-206ENST00000506560 PTPRUQ92729 1446 aa16.18■□□□□ 0.18
LIN54-206ENST00000506560 PDE3BQ13370 1112 aa16.18■□□□□ 0.18
LIN54-206ENST00000506560 ZNF521Q96K83 1311 aa16.18■□□□□ 0.18
LIN54-206ENST00000506560 NINLQ9Y2I6 1382 aa16.17■□□□□ 0.18
LIN54-206ENST00000506560 TSHZ2Q9NRE2 1034 aa16.17■□□□□ 0.18
LIN54-206ENST00000506560 PLEKHG1Q9ULL1 1385 aa16.17■□□□□ 0.18
LIN54-206ENST00000506560 RRP7AQ9Y3A4 280 aaKnown RBP16.17■□□□□ 0.18
LIN54-206ENST00000506560 PRR36Q9H6K5 1346 aa16.16■□□□□ 0.18
LIN54-206ENST00000506560 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
LIN54-206ENST00000506560 PPP4R2Q9NY27 417 aa16.16■□□□□ 0.18
LIN54-206ENST00000506560 TECPR2O15040 1411 aa16.16■□□□□ 0.18
LIN54-206ENST00000506560 PLIN1O60240 522 aa16.15■□□□□ 0.18
LIN54-206ENST00000506560 MYT1Q01538 1121 aa16.15■□□□□ 0.18
LIN54-206ENST00000506560 HDGFL2Q7Z4V5 671 aaPredicted RBP16.15■□□□□ 0.18
LIN54-206ENST00000506560 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
LIN54-206ENST00000506560 NUDT16Q96DE0 195 aaKnown RBP16.15■□□□□ 0.18
LIN54-206ENST00000506560 PPIP5K1Q6PFW1 1433 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 CPS1P31327 1500 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 RRP1P56182 461 aaKnown RBP16.14■□□□□ 0.17
LIN54-206ENST00000506560 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 EID1Q9Y6B2 187 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 NSD2O96028 1365 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 KNDC1Q76NI1 1749 aa16.14■□□□□ 0.17
LIN54-206ENST00000506560 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.17
LIN54-206ENST00000506560 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.13■□□□□ 0.17
LIN54-206ENST00000506560 MED14O60244 1454 aa16.13■□□□□ 0.17
LIN54-206ENST00000506560 ARHGAP23Q9P227 1491 aa16.13■□□□□ 0.17
LIN54-206ENST00000506560 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
LIN54-206ENST00000506560 FAM135BQ49AJ0 1406 aa16.13■□□□□ 0.17
LIN54-206ENST00000506560 NME9Q86XW9 330 aa16.12■□□□□ 0.17
LIN54-206ENST00000506560 SLIT1O75093 1534 aa16.12■□□□□ 0.17
LIN54-206ENST00000506560 AMOTL2Q9Y2J4 779 aa16.12■□□□□ 0.17
LIN54-206ENST00000506560 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
LIN54-206ENST00000506560 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
LIN54-206ENST00000506560 U2AF1L5P0DN76 240 aaPredicted RBP16.1■□□□□ 0.17
LIN54-206ENST00000506560 U2AF1Q01081 240 aaKnown RBP eCLIP16.1■□□□□ 0.17
LIN54-206ENST00000506560 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
LIN54-206ENST00000506560 ATP7BP35670 1465 aa16.1■□□□□ 0.17
LIN54-206ENST00000506560 SLFN5Q08AF3 891 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
LIN54-206ENST00000506560 TCP11L2Q8N4U5 519 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 SIRT1Q96EB6 747 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 CFAP53Q96M91 514 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 KIF20BQ96Q89 1820 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
LIN54-206ENST00000506560 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
LIN54-206ENST00000506560 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms