RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 KDM2AQ9Y2K7 1162 aa26.78■■□□□ 1.88
CCND3-209ENST00000505884 YTHDC2Q9H6S0 1430 aaKnown RBP26.77■■□□□ 1.88
CCND3-209ENST00000505884 LRRC59Q96AG4 307 aaKnown RBP26.77■■□□□ 1.88
CCND3-209ENST00000505884 ESCO1Q5FWF5 840 aa26.76■■□□□ 1.87
CCND3-209ENST00000505884 C14orf93Q9H972 538 aaKnown RBP26.76■■□□□ 1.87
CCND3-209ENST00000505884 KNDC1Q76NI1 1749 aa26.75■■□□□ 1.87
CCND3-209ENST00000505884 TECPR2O15040 1411 aa26.73■■□□□ 1.87
CCND3-209ENST00000505884 ABCC11Q96J66 1382 aa26.73■■□□□ 1.87
CCND3-209ENST00000505884 SAFB2Q14151 953 aaKnown RBP eCLIP26.73■■□□□ 1.87
CCND3-209ENST00000505884 MYOM2P54296 1465 aa26.73■■□□□ 1.87
CCND3-209ENST00000505884 CDC42BPGQ6DT37 1551 aa26.72■■□□□ 1.87
CCND3-209ENST00000505884 NRXN1Q9ULB1 1477 aa26.72■■□□□ 1.87
CCND3-209ENST00000505884 XPCQ01831 940 aaPredicted RBP26.71■■□□□ 1.87
CCND3-209ENST00000505884 DCAF11Q8TEB1 546 aa26.71■■□□□ 1.87
CCND3-209ENST00000505884 PNPLA6Q8IY17 1366 aa26.71■■□□□ 1.87
CCND3-209ENST00000505884 DHX57Q6P158 1386 aaKnown RBP26.69■■□□□ 1.86
CCND3-209ENST00000505884 HRCP23327 699 aa26.68■■□□□ 1.86
CCND3-209ENST00000505884 LAMC1P11047 1609 aa26.68■■□□□ 1.86
CCND3-209ENST00000505884 ADAMTS2O95450 1211 aa26.67■■□□□ 1.86
CCND3-209ENST00000505884 C8orf37Q96NL8 207 aa26.67■■□□□ 1.86
CCND3-209ENST00000505884 SOS2Q07890 1332 aaPredicted RBP26.66■■□□□ 1.86
CCND3-209ENST00000505884 FOXO3O43524 673 aa26.66■■□□□ 1.86
CCND3-209ENST00000505884 PRAM1Q96QH2 718 aa26.66■■□□□ 1.86
CCND3-209ENST00000505884 ZNF772Q68DY9 489 aaPredicted RBP26.65■■□□□ 1.86
CCND3-209ENST00000505884 FMN2Q9NZ56 1722 aa26.65■■□□□ 1.86
CCND3-209ENST00000505884 AFF2P51816 1311 aa26.65■■□□□ 1.86
CCND3-209ENST00000505884 RGPD8O14715 1765 aaPredicted RBP26.64■■□□□ 1.86
CCND3-209ENST00000505884 POGKQ9P215 609 aa26.62■■□□□ 1.85
CCND3-209ENST00000505884 TRAK1Q9UPV9 953 aa26.62■■□□□ 1.85
CCND3-209ENST00000505884 NPHP3Q7Z494 1330 aa26.6■■□□□ 1.85
CCND3-209ENST00000505884 PXDNQ92626 1479 aa26.58■■□□□ 1.85
CCND3-209ENST00000505884 SIRT1Q96EB6 747 aa26.58■■□□□ 1.85
CCND3-209ENST00000505884 HIRIP3Q9BW71 556 aaPredicted RBP26.58■■□□□ 1.85
CCND3-209ENST00000505884 ADGRB1O14514 1584 aa26.58■■□□□ 1.85
CCND3-209ENST00000505884 NGLY1Q96IV0 654 aa26.57■■□□□ 1.84
CCND3-209ENST00000505884 PLEKHG5O94827 1062 aa26.55■■□□□ 1.84
CCND3-209ENST00000505884 RXRBP28702 533 aa26.55■■□□□ 1.84
CCND3-209ENST00000505884 MINK1Q8N4C8 1332 aaPredicted RBP26.53■■□□□ 1.84
CCND3-209ENST00000505884 DLC1Q96QB1 1528 aa26.52■■□□□ 1.84
CCND3-209ENST00000505884 QTRT2Q9H974 415 aaKnown RBP26.51■■□□□ 1.83
CCND3-209ENST00000505884 PHF8Q9UPP1 1060 aa26.51■■□□□ 1.83
CCND3-209ENST00000505884 KIF1AQ12756 1690 aa26.5■■□□□ 1.83
CCND3-209ENST00000505884 COL22A1Q8NFW1 1626 aaPredicted RBP26.5■■□□□ 1.83
CCND3-209ENST00000505884 KRT28Q7Z3Y7 464 aa26.5■■□□□ 1.83
CCND3-209ENST00000505884 PMFBP1Q8TBY8 1022 aa26.49■■□□□ 1.83
CCND3-209ENST00000505884 USP32Q8NFA0 1604 aa26.47■■□□□ 1.83
CCND3-209ENST00000505884 USP21Q9UK80 565 aa26.46■■□□□ 1.83
CCND3-209ENST00000505884 LMOD2Q6P5Q4 547 aa26.45■■□□□ 1.82
CCND3-209ENST00000505884 STAC3Q96MF2 364 aa26.44■■□□□ 1.82
CCND3-209ENST00000505884 SPATA31A3Q5VYP0 1347 aa26.43■■□□□ 1.82
CCND3-209ENST00000505884 ARHGEF28Q8N1W1 1705 aaKnown RBP26.43■■□□□ 1.82
CCND3-209ENST00000505884 PSME1Q06323 249 aa26.43■■□□□ 1.82
CCND3-209ENST00000505884 MARF1Q9Y4F3 1742 aaKnown RBP26.42■■□□□ 1.82
CCND3-209ENST00000505884 ADGRB2O60241 1585 aa26.42■■□□□ 1.82
CCND3-209ENST00000505884 RBM6P78332 1123 aaKnown RBP26.41■■□□□ 1.82
CCND3-209ENST00000505884 CABLES1Q8TDN4 633 aa26.41■■□□□ 1.82
CCND3-209ENST00000505884 SIN3AQ96ST3 1273 aa26.41■■□□□ 1.82
CCND3-209ENST00000505884 PRR36Q9H6K5 1346 aa26.4■■□□□ 1.82
CCND3-209ENST00000505884 NBPF1Q3BBV0 1214 aa26.4■■□□□ 1.82
CCND3-209ENST00000505884 WASLO00401 505 aaPredicted RBP26.39■■□□□ 1.82
CCND3-209ENST00000505884 RGS12O14924 1447 aa26.39■■□□□ 1.81
CCND3-209ENST00000505884 HAP1P54257 671 aaPredicted RBP26.38■■□□□ 1.81
CCND3-209ENST00000505884 NEUROD1Q13562 356 aa26.38■■□□□ 1.81
CCND3-209ENST00000505884 FNBP4Q8N3X1 1017 aaPredicted RBP26.37■■□□□ 1.81
CCND3-209ENST00000505884 TNS3Q68CZ2 1445 aa26.37■■□□□ 1.81
CCND3-209ENST00000505884 ANKARQ7Z5J8 1434 aa26.37■■□□□ 1.81
CCND3-209ENST00000505884 TRPC5Q9UL62 973 aaPredicted RBP26.35■■□□□ 1.81
CCND3-209ENST00000505884 TULP4Q9NRJ4 1543 aa26.34■■□□□ 1.81
CCND3-209ENST00000505884 UPF1Q92900 1129 aaKnown RBP eCLIP26.34■■□□□ 1.81
CCND3-209ENST00000505884 CDK12Q9NYV4 1490 aaPredicted RBP26.34■■□□□ 1.81
CCND3-209ENST00000505884 L3MBTL2Q969R5 705 aa26.33■■□□□ 1.81
CCND3-209ENST00000505884 KIAA1210Q9ULL0 1709 aa26.33■■□□□ 1.81
CCND3-209ENST00000505884 BCL9LQ86UU0 1499 aa26.32■■□□□ 1.8
CCND3-209ENST00000505884 NGDNQ8NEJ9 315 aaKnown RBP26.31■■□□□ 1.8
CCND3-209ENST00000505884 ATRNO75882 1429 aa26.31■■□□□ 1.8
CCND3-209ENST00000505884 CDK19Q9BWU1 502 aa26.3■■□□□ 1.8
CCND3-209ENST00000505884 SBNO1A3KN83 1393 aa26.3■■□□□ 1.8
CCND3-209ENST00000505884 NUDT16Q96DE0 195 aaKnown RBP26.29■■□□□ 1.8
CCND3-209ENST00000505884 EIF3AQ14152 1382 aaKnown RBP26.29■■□□□ 1.8
CCND3-209ENST00000505884 ABCA3Q99758 1704 aa26.28■■□□□ 1.8
CCND3-209ENST00000505884 TRPM3Q9HCF6 1732 aaPredicted RBP26.28■■□□□ 1.8
CCND3-209ENST00000505884 PAK3O75914 559 aaPredicted RBP26.28■■□□□ 1.8
CCND3-209ENST00000505884 GPRASP1Q5JY77 1395 aa26.28■■□□□ 1.8
CCND3-209ENST00000505884 ATP7BP35670 1465 aa26.25■■□□□ 1.79
CCND3-209ENST00000505884 ARHGEF10O15013 1369 aa26.25■■□□□ 1.79
CCND3-209ENST00000505884 ITSN1Q15811 1721 aa26.25■■□□□ 1.79
CCND3-209ENST00000505884 UNC5CLQ8IV45 518 aa26.24■■□□□ 1.79
CCND3-209ENST00000505884 PLCH1Q4KWH8 1693 aa26.22■■□□□ 1.79
CCND3-209ENST00000505884 ALS2Q96Q42 1657 aa26.22■■□□□ 1.79
CCND3-209ENST00000505884 GJD4Q96KN9 370 aaPredicted RBP26.22■■□□□ 1.79
CCND3-209ENST00000505884 SLIT2O94813 1529 aa26.22■■□□□ 1.79
CCND3-209ENST00000505884 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.2■■□□□ 1.79
CCND3-209ENST00000505884 NUTM2GQ5VZR2 741 aa26.2■■□□□ 1.78
CCND3-209ENST00000505884 CENPJQ9HC77 1338 aaPredicted RBP26.19■■□□□ 1.78
CCND3-209ENST00000505884 QRICH2Q9H0J4 1663 aa26.19■■□□□ 1.78
CCND3-209ENST00000505884 FAM83GA6ND36 823 aa26.19■■□□□ 1.78
CCND3-209ENST00000505884 SRPK2P78362 688 aaKnown RBP26.19■■□□□ 1.78
CCND3-209ENST00000505884 CCDC9Q9Y3X0 531 aaKnown RBP26.19■■□□□ 1.78
CCND3-209ENST00000505884 CABP2Q9NPB3 220 aa26.18■■□□□ 1.78
CCND3-209ENST00000505884 TRPM1Q7Z4N2 1603 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms