RNA–Protein interactions for RNA: ENST00000505016.2

MATR3-234, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-234ENST00000505016 RPGRIP1LQ68CZ1 1315 aa18.34■□□□□ 0.53
MATR3-234ENST00000505016 PPLO60437 1756 aa18.34■□□□□ 0.53
MATR3-234ENST00000505016 NHSL1Q5SYE7 1610 aa18.34■□□□□ 0.53
MATR3-234ENST00000505016 ROBO2Q9HCK4 1378 aa18.32■□□□□ 0.52
MATR3-234ENST00000505016 MEX3CQ5U5Q3 659 aaKnown RBP18.32■□□□□ 0.52
MATR3-234ENST00000505016 PTCH1Q13635 1447 aa18.32■□□□□ 0.52
MATR3-234ENST00000505016 SETD5Q9C0A6 1442 aa18.31■□□□□ 0.52
MATR3-234ENST00000505016 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
MATR3-234ENST00000505016 NUTM2BA6NNL0 878 aaPredicted RBP18.29■□□□□ 0.52
MATR3-234ENST00000505016 NUTM2EB1AL46 878 aaPredicted RBP18.29■□□□□ 0.52
MATR3-234ENST00000505016 NUTM2AQ8IVF1 878 aaPredicted RBP18.29■□□□□ 0.52
MATR3-234ENST00000505016 PRAG1Q86YV5 1406 aa18.29■□□□□ 0.52
MATR3-234ENST00000505016 C1orf167Q5SNV9 1468 aa18.27■□□□□ 0.52
MATR3-234ENST00000505016 CCDC144AA2RUR9 1427 aa18.27■□□□□ 0.52
MATR3-234ENST00000505016 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.52
MATR3-234ENST00000505016 ADGRF5Q8IZF2 1346 aa18.26■□□□□ 0.51
MATR3-234ENST00000505016 SPATA31E1Q6ZUB1 1445 aa18.26■□□□□ 0.51
MATR3-234ENST00000505016 ZNF772Q68DY9 489 aaPredicted RBP18.26■□□□□ 0.51
MATR3-234ENST00000505016 LRRC59Q96AG4 307 aaKnown RBP18.26■□□□□ 0.51
MATR3-234ENST00000505016 RGL3Q3MIN7 710 aa18.25■□□□□ 0.51
MATR3-234ENST00000505016 MKRN4PQ13434 485 aaPredicted RBP18.24■□□□□ 0.51
MATR3-234ENST00000505016 ORAI2Q96SN7 254 aa18.24■□□□□ 0.51
MATR3-234ENST00000505016 PNPLA6Q8IY17 1366 aa18.24■□□□□ 0.51
MATR3-234ENST00000505016 IFT172Q9UG01 1749 aa18.23■□□□□ 0.51
MATR3-234ENST00000505016 LAMC1P11047 1609 aa18.23■□□□□ 0.51
MATR3-234ENST00000505016 AFF2P51816 1311 aa18.21■□□□□ 0.51
MATR3-234ENST00000505016 ANKRD30BQ9BXX2 1392 aa18.19■□□□□ 0.5
MATR3-234ENST00000505016 STK26Q9P289 416 aa18.19■□□□□ 0.5
MATR3-234ENST00000505016 SOS2Q07890 1332 aaPredicted RBP18.19■□□□□ 0.5
MATR3-234ENST00000505016 C8orf37Q96NL8 207 aa18.18■□□□□ 0.5
MATR3-234ENST00000505016 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
MATR3-234ENST00000505016 TECPR2O15040 1411 aa18.17■□□□□ 0.5
MATR3-234ENST00000505016 PIK3C2GO75747 1445 aa18.17■□□□□ 0.5
MATR3-234ENST00000505016 RXRBP28702 533 aa18.17■□□□□ 0.5
MATR3-234ENST00000505016 TMEM132EQ6IEE7 984 aa18.17■□□□□ 0.5
MATR3-234ENST00000505016 WAPLQ7Z5K2 1190 aa18.17■□□□□ 0.5
MATR3-234ENST00000505016 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
MATR3-234ENST00000505016 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
MATR3-234ENST00000505016 PLEKHH1Q9ULM0 1364 aa18.15■□□□□ 0.5
MATR3-234ENST00000505016 ADAMTS2O95450 1211 aa18.14■□□□□ 0.49
MATR3-234ENST00000505016 ESCO1Q5FWF5 840 aa18.14■□□□□ 0.49
MATR3-234ENST00000505016 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.49
MATR3-234ENST00000505016 ABCC11Q96J66 1382 aa18.14■□□□□ 0.49
MATR3-234ENST00000505016 CDK12Q9NYV4 1490 aaPredicted RBP18.13■□□□□ 0.49
MATR3-234ENST00000505016 UPF1Q92900 1129 aaKnown RBP eCLIP18.12■□□□□ 0.49
MATR3-234ENST00000505016 QTRT2Q9H974 415 aaKnown RBP18.12■□□□□ 0.49
MATR3-234ENST00000505016 ACIN1Q9UKV3 1341 aaKnown RBP18.12■□□□□ 0.49
MATR3-234ENST00000505016 YTHDC2Q9H6S0 1430 aaKnown RBP18.12■□□□□ 0.49
MATR3-234ENST00000505016 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
MATR3-234ENST00000505016 RAB3GAP2Q9H2M9 1393 aa18.11■□□□□ 0.49
MATR3-234ENST00000505016 PXDNQ92626 1479 aa18.11■□□□□ 0.49
MATR3-234ENST00000505016 COL22A1Q8NFW1 1626 aaPredicted RBP18.1■□□□□ 0.49
MATR3-234ENST00000505016 NRXN1Q9ULB1 1477 aa18.1■□□□□ 0.49
MATR3-234ENST00000505016 NPHP3Q7Z494 1330 aa18.1■□□□□ 0.49
MATR3-234ENST00000505016 NGLY1Q96IV0 654 aa18.1■□□□□ 0.49
MATR3-234ENST00000505016 FOXO3O43524 673 aa18.09■□□□□ 0.49
MATR3-234ENST00000505016 XPCQ01831 940 aaPredicted RBP18.09■□□□□ 0.49
MATR3-234ENST00000505016 C14orf93Q9H972 538 aaKnown RBP18.09■□□□□ 0.49
MATR3-234ENST00000505016 RGS12O14924 1447 aa18.08■□□□□ 0.49
MATR3-234ENST00000505016 RBM6P78332 1123 aaKnown RBP18.08■□□□□ 0.48
MATR3-234ENST00000505016 CFAP70Q5T0N1 1121 aa18.08■□□□□ 0.48
MATR3-234ENST00000505016 FMN2Q9NZ56 1722 aa18.08■□□□□ 0.48
MATR3-234ENST00000505016 MYOM2P54296 1465 aa18.07■□□□□ 0.48
MATR3-234ENST00000505016 SIRT1Q96EB6 747 aa18.06■□□□□ 0.48
MATR3-234ENST00000505016 FNBP4Q8N3X1 1017 aaPredicted RBP18.04■□□□□ 0.48
MATR3-234ENST00000505016 USP21Q9UK80 565 aa18.04■□□□□ 0.48
MATR3-234ENST00000505016 DHX57Q6P158 1386 aaKnown RBP18.04■□□□□ 0.48
MATR3-234ENST00000505016 KIF1AQ12756 1690 aa18.02■□□□□ 0.47
MATR3-234ENST00000505016 SAFB2Q14151 953 aaKnown RBP eCLIP18.01■□□□□ 0.47
MATR3-234ENST00000505016 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
MATR3-234ENST00000505016 RGPD8O14715 1765 aaPredicted RBP18.01■□□□□ 0.47
MATR3-234ENST00000505016 MARF1Q9Y4F3 1742 aaKnown RBP18.01■□□□□ 0.47
MATR3-234ENST00000505016 ATRNO75882 1429 aa18■□□□□ 0.47
MATR3-234ENST00000505016 TRPC5Q9UL62 973 aaPredicted RBP18■□□□□ 0.47
MATR3-234ENST00000505016 BCL9LQ86UU0 1499 aa17.99■□□□□ 0.47
MATR3-234ENST00000505016 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
MATR3-234ENST00000505016 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
MATR3-234ENST00000505016 KRT28Q7Z3Y7 464 aa17.98■□□□□ 0.47
MATR3-234ENST00000505016 ADGRB1O14514 1584 aa17.98■□□□□ 0.47
MATR3-234ENST00000505016 PHF8Q9UPP1 1060 aa17.97■□□□□ 0.47
MATR3-234ENST00000505016 POGKQ9P215 609 aa17.96■□□□□ 0.47
MATR3-234ENST00000505016 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
MATR3-234ENST00000505016 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
MATR3-234ENST00000505016 USP32Q8NFA0 1604 aa17.94■□□□□ 0.46
MATR3-234ENST00000505016 HRCP23327 699 aa17.94■□□□□ 0.46
MATR3-234ENST00000505016 TRAK1Q9UPV9 953 aa17.94■□□□□ 0.46
MATR3-234ENST00000505016 TNS3Q68CZ2 1445 aa17.94■□□□□ 0.46
MATR3-234ENST00000505016 ADGRB2O60241 1585 aa17.94■□□□□ 0.46
MATR3-234ENST00000505016 PSME1Q06323 249 aa17.92■□□□□ 0.46
MATR3-234ENST00000505016 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
MATR3-234ENST00000505016 SLIT2O94813 1529 aa17.92■□□□□ 0.46
MATR3-234ENST00000505016 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
MATR3-234ENST00000505016 ANKARQ7Z5J8 1434 aa17.91■□□□□ 0.46
MATR3-234ENST00000505016 PMFBP1Q8TBY8 1022 aa17.91■□□□□ 0.46
MATR3-234ENST00000505016 CABLES1Q8TDN4 633 aa17.91■□□□□ 0.46
MATR3-234ENST00000505016 AKT1S1Q96B36 256 aa17.91■□□□□ 0.46
MATR3-234ENST00000505016 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.91■□□□□ 0.46
MATR3-234ENST00000505016 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
MATR3-234ENST00000505016 UNC5CLQ8IV45 518 aa17.9■□□□□ 0.46
MATR3-234ENST00000505016 GJD4Q96KN9 370 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms