RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
LMNA-220ENST00000504687 PIK3R4Q99570 1358 aa18.1■□□□□ 0.49
LMNA-220ENST00000504687 AMER1Q5JTC6 1135 aaPredicted RBP18.1■□□□□ 0.49
LMNA-220ENST00000504687 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
LMNA-220ENST00000504687 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
LMNA-220ENST00000504687 TBX22Q9Y458 520 aa18.1■□□□□ 0.49
LMNA-220ENST00000504687 INSRP06213 1382 aa18.09■□□□□ 0.49
LMNA-220ENST00000504687 PRAM1Q96QH2 718 aa18.09■□□□□ 0.49
LMNA-220ENST00000504687 NLRP13Q86W25 1043 aa18.08■□□□□ 0.48
LMNA-220ENST00000504687 MRS2Q9HD23 443 aa18.08■□□□□ 0.48
LMNA-220ENST00000504687 POGKQ9P215 609 aa18.08■□□□□ 0.48
LMNA-220ENST00000504687 ANKRD36BQ8N2N9 1353 aa18.07■□□□□ 0.48
LMNA-220ENST00000504687 STK26Q9P289 416 aa18.07■□□□□ 0.48
LMNA-220ENST00000504687 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
LMNA-220ENST00000504687 XRN1Q8IZH2 1706 aaKnown RBP18.06■□□□□ 0.48
LMNA-220ENST00000504687 CCDC184Q52MB2 194 aa18.06■□□□□ 0.48
LMNA-220ENST00000504687 NSD2O96028 1365 aa18.04■□□□□ 0.48
LMNA-220ENST00000504687 CARD14Q9BXL6 1004 aa18.03■□□□□ 0.48
LMNA-220ENST00000504687 ATP7BP35670 1465 aa18.02■□□□□ 0.48
LMNA-220ENST00000504687 PNISRQ8TF01 805 aaKnown RBP18.02■□□□□ 0.48
LMNA-220ENST00000504687 PTPRUQ92729 1446 aa18.01■□□□□ 0.47
LMNA-220ENST00000504687 TMC1Q8TDI8 760 aa18.01■□□□□ 0.47
LMNA-220ENST00000504687 PLEKHH1Q9ULM0 1364 aa18.01■□□□□ 0.47
LMNA-220ENST00000504687 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
LMNA-220ENST00000504687 CD163L1Q9NR16 1453 aa18■□□□□ 0.47
LMNA-220ENST00000504687 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
LMNA-220ENST00000504687 MINK1Q8N4C8 1332 aaPredicted RBP17.99■□□□□ 0.47
LMNA-220ENST00000504687 NSD3Q9BZ95 1437 aa17.99■□□□□ 0.47
LMNA-220ENST00000504687 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.99■□□□□ 0.47
LMNA-220ENST00000504687 SLC12A5Q9H2X9 1139 aa17.99■□□□□ 0.47
LMNA-220ENST00000504687 ROBO2Q9HCK4 1378 aa17.99■□□□□ 0.47
LMNA-220ENST00000504687 CC2D1BQ5T0F9 858 aaKnown RBP17.98■□□□□ 0.47
LMNA-220ENST00000504687 ANKLE2Q86XL3 938 aa17.98■□□□□ 0.47
LMNA-220ENST00000504687 CDK19Q9BWU1 502 aa17.98■□□□□ 0.47
LMNA-220ENST00000504687 CABP2Q9NPB3 220 aa17.98■□□□□ 0.47
LMNA-220ENST00000504687 TOPAZ1Q8N9V7 1692 aa17.97■□□□□ 0.47
LMNA-220ENST00000504687 LMTK3Q96Q04 1460 aa17.97■□□□□ 0.47
LMNA-220ENST00000504687 WASLO00401 505 aaPredicted RBP17.97■□□□□ 0.47
LMNA-220ENST00000504687 SRPK2P78362 688 aaKnown RBP17.97■□□□□ 0.47
LMNA-220ENST00000504687 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
LMNA-220ENST00000504687 BCANQ96GW7 911 aa17.96■□□□□ 0.47
LMNA-220ENST00000504687 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
LMNA-220ENST00000504687 CGNL1Q0VF96 1302 aa17.96■□□□□ 0.46
LMNA-220ENST00000504687 A0A1W2PP64 1363 aa17.95■□□□□ 0.46
LMNA-220ENST00000504687 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
LMNA-220ENST00000504687 SAFB2Q14151 953 aaKnown RBP eCLIP17.95■□□□□ 0.46
LMNA-220ENST00000504687 AKAP12Q02952 1782 aa17.94■□□□□ 0.46
LMNA-220ENST00000504687 HSPA2P54652 639 aa17.94■□□□□ 0.46
LMNA-220ENST00000504687 CPSF1Q10570 1443 aaKnown RBP17.94■□□□□ 0.46
LMNA-220ENST00000504687 MON2Q7Z3U7 1717 aa17.94■□□□□ 0.46
LMNA-220ENST00000504687 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
LMNA-220ENST00000504687 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
LMNA-220ENST00000504687 KIF20BQ96Q89 1820 aa17.93■□□□□ 0.46
LMNA-220ENST00000504687 HNRNPUQ00839 825 aaKnown RBP eCLIP17.92■□□□□ 0.46
LMNA-220ENST00000504687 FAM9BQ8IZU0 186 aa17.92■□□□□ 0.46
LMNA-220ENST00000504687 SLC26A8Q96RN1 970 aa17.92■□□□□ 0.46
LMNA-220ENST00000504687 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
LMNA-220ENST00000504687 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
LMNA-220ENST00000504687 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
LMNA-220ENST00000504687 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
LMNA-220ENST00000504687 NPHP4O75161 1426 aaPredicted RBP17.9■□□□□ 0.46
LMNA-220ENST00000504687 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
LMNA-220ENST00000504687 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
LMNA-220ENST00000504687 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.46
LMNA-220ENST00000504687 CCDC61Q9Y6R9 512 aa17.89■□□□□ 0.45
LMNA-220ENST00000504687 STRCQ7RTU9 1775 aa17.88■□□□□ 0.45
LMNA-220ENST00000504687 EDC4Q6P2E9 1401 aaKnown RBP17.88■□□□□ 0.45
LMNA-220ENST00000504687 PPIP5K1Q6PFW1 1433 aa17.88■□□□□ 0.45
LMNA-220ENST00000504687 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
LMNA-220ENST00000504687 ANKARQ7Z5J8 1434 aa17.87■□□□□ 0.45
LMNA-220ENST00000504687 FMN2Q9NZ56 1722 aa17.86■□□□□ 0.45
LMNA-220ENST00000504687 CABP1Q9NZU7 370 aa17.86■□□□□ 0.45
LMNA-220ENST00000504687 NRKQ7Z2Y5 1582 aa17.86■□□□□ 0.45
LMNA-220ENST00000504687 CNGB1Q14028 1251 aaPredicted RBP17.85■□□□□ 0.45
LMNA-220ENST00000504687 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
LMNA-220ENST00000504687 PLEKHG3A1L390 1219 aa17.84■□□□□ 0.45
LMNA-220ENST00000504687 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
LMNA-220ENST00000504687 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.44
LMNA-220ENST00000504687 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
LMNA-220ENST00000504687 SHPRHQ149N8 1683 aa17.83■□□□□ 0.44
LMNA-220ENST00000504687 NALCNQ8IZF0 1738 aa17.82■□□□□ 0.44
LMNA-220ENST00000504687 FYB1O15117 783 aa17.82■□□□□ 0.44
LMNA-220ENST00000504687 KCNA6P17658 529 aa17.81■□□□□ 0.44
LMNA-220ENST00000504687 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
LMNA-220ENST00000504687 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
LMNA-220ENST00000504687 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
LMNA-220ENST00000504687 ADGRL3Q9HAR2 1447 aa17.78■□□□□ 0.44
LMNA-220ENST00000504687 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
LMNA-220ENST00000504687 USP54Q70EL1 1684 aa17.77■□□□□ 0.43
LMNA-220ENST00000504687 SMG6Q86US8 1419 aaKnown RBP17.76■□□□□ 0.43
LMNA-220ENST00000504687 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
LMNA-220ENST00000504687 WDR43Q15061 677 aaKnown RBP eCLIP17.76■□□□□ 0.43
LMNA-220ENST00000504687 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
LMNA-220ENST00000504687 RGPD8O14715 1765 aaPredicted RBP17.76■□□□□ 0.43
LMNA-220ENST00000504687 USP6P35125 1406 aa17.75■□□□□ 0.43
LMNA-220ENST00000504687 PDE3BQ13370 1112 aa17.75■□□□□ 0.43
LMNA-220ENST00000504687 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
LMNA-220ENST00000504687 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
LMNA-220ENST00000504687 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
LMNA-220ENST00000504687 LRRC7Q96NW7 1537 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms