RNA–Protein interactions for RNA: ENST00000503868.5

PTCD2-207, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-207ENST00000503868 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
PTCD2-207ENST00000503868 SAFB2Q14151 953 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTCD2-207ENST00000503868 AMOTL2Q9Y2J4 779 aa18.73■□□□□ 0.59
PTCD2-207ENST00000503868 EVC2Q86UK5 1308 aa18.73■□□□□ 0.59
PTCD2-207ENST00000503868 ROBO2Q9HCK4 1378 aa18.73■□□□□ 0.59
PTCD2-207ENST00000503868 MINK1Q8N4C8 1332 aaPredicted RBP18.71■□□□□ 0.59
PTCD2-207ENST00000503868 PTCH1Q13635 1447 aa18.7■□□□□ 0.58
PTCD2-207ENST00000503868 PER1O15534 1290 aaPredicted RBP18.69■□□□□ 0.58
PTCD2-207ENST00000503868 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.68■□□□□ 0.58
PTCD2-207ENST00000503868 ANP32CO43423 234 aa18.68■□□□□ 0.58
PTCD2-207ENST00000503868 HSPA2P54652 639 aa18.68■□□□□ 0.58
PTCD2-207ENST00000503868 PANK3Q9H999 370 aa18.67■□□□□ 0.58
PTCD2-207ENST00000503868 CDK19Q9BWU1 502 aa18.66■□□□□ 0.58
PTCD2-207ENST00000503868 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
PTCD2-207ENST00000503868 STRCQ7RTU9 1775 aa18.66■□□□□ 0.58
PTCD2-207ENST00000503868 ADGRB2O60241 1585 aa18.65■□□□□ 0.58
PTCD2-207ENST00000503868 KCNA6P17658 529 aa18.65■□□□□ 0.58
PTCD2-207ENST00000503868 WASLO00401 505 aaPredicted RBP18.63■□□□□ 0.57
PTCD2-207ENST00000503868 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
PTCD2-207ENST00000503868 SRPK2P78362 688 aaKnown RBP18.63■□□□□ 0.57
PTCD2-207ENST00000503868 PRKRIP1Q9H875 184 aaPredicted RBP18.63■□□□□ 0.57
PTCD2-207ENST00000503868 ATAD2Q6PL18 1390 aa18.62■□□□□ 0.57
PTCD2-207ENST00000503868 SLC12A5Q9H2X9 1139 aa18.61■□□□□ 0.57
PTCD2-207ENST00000503868 NINLQ9Y2I6 1382 aa18.61■□□□□ 0.57
PTCD2-207ENST00000503868 CCER2I3L3R5 266 aa18.59■□□□□ 0.57
PTCD2-207ENST00000503868 TMC1Q8TDI8 760 aa18.58■□□□□ 0.57
PTCD2-207ENST00000503868 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.57
PTCD2-207ENST00000503868 KTN1Q86UP2 1357 aaKnown RBP18.56■□□□□ 0.56
PTCD2-207ENST00000503868 ANKRD36BQ8N2N9 1353 aa18.56■□□□□ 0.56
PTCD2-207ENST00000503868 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
PTCD2-207ENST00000503868 AMER1Q5JTC6 1135 aaPredicted RBP18.55■□□□□ 0.56
PTCD2-207ENST00000503868 KNSTRNQ9Y448 316 aa18.55■□□□□ 0.56
PTCD2-207ENST00000503868 CD163L1Q9NR16 1453 aa18.55■□□□□ 0.56
PTCD2-207ENST00000503868 NUDT16Q96DE0 195 aaKnown RBP18.54■□□□□ 0.56
PTCD2-207ENST00000503868 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
PTCD2-207ENST00000503868 ATP7BP35670 1465 aa18.54■□□□□ 0.56
PTCD2-207ENST00000503868 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
PTCD2-207ENST00000503868 CABP1Q9NZU7 370 aa18.54■□□□□ 0.56
PTCD2-207ENST00000503868 PRR36Q9H6K5 1346 aa18.53■□□□□ 0.56
PTCD2-207ENST00000503868 NKTRP30414 1462 aaKnown RBP18.53■□□□□ 0.56
PTCD2-207ENST00000503868 PARD3Q8TEW0 1356 aa18.53■□□□□ 0.56
PTCD2-207ENST00000503868 RALBP1Q15311 655 aa18.53■□□□□ 0.56
PTCD2-207ENST00000503868 CCDC61Q9Y6R9 512 aa18.53■□□□□ 0.56
PTCD2-207ENST00000503868 TOPAZ1Q8N9V7 1692 aa18.52■□□□□ 0.56
PTCD2-207ENST00000503868 USP32Q8NFA0 1604 aa18.52■□□□□ 0.56
PTCD2-207ENST00000503868 FMN2Q9NZ56 1722 aa18.51■□□□□ 0.55
PTCD2-207ENST00000503868 A0A1W2PP64 1363 aa18.51■□□□□ 0.55
PTCD2-207ENST00000503868 CDC42BPGQ6DT37 1551 aa18.5■□□□□ 0.55
PTCD2-207ENST00000503868 PPIP5K1Q6PFW1 1433 aa18.5■□□□□ 0.55
PTCD2-207ENST00000503868 NSD3Q9BZ95 1437 aa18.5■□□□□ 0.55
PTCD2-207ENST00000503868 ADGRL3Q9HAR2 1447 aa18.5■□□□□ 0.55
PTCD2-207ENST00000503868 TERF2IPQ9NYB0 399 aa18.5■□□□□ 0.55
PTCD2-207ENST00000503868 RGPD8O14715 1765 aaPredicted RBP18.49■□□□□ 0.55
PTCD2-207ENST00000503868 CPSF1Q10570 1443 aaKnown RBP18.48■□□□□ 0.55
PTCD2-207ENST00000503868 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
PTCD2-207ENST00000503868 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
PTCD2-207ENST00000503868 PROSER2Q86WR7 435 aaPredicted RBP18.47■□□□□ 0.55
PTCD2-207ENST00000503868 RBM33Q96EV2 1170 aaKnown RBP18.47■□□□□ 0.55
PTCD2-207ENST00000503868 ITSN1Q15811 1721 aa18.47■□□□□ 0.55
PTCD2-207ENST00000503868 ANKARQ7Z5J8 1434 aa18.47■□□□□ 0.55
PTCD2-207ENST00000503868 AKAP12Q02952 1782 aa18.47■□□□□ 0.55
PTCD2-207ENST00000503868 PLEKHG3A1L390 1219 aa18.47■□□□□ 0.55
PTCD2-207ENST00000503868 HDGFL2Q7Z4V5 671 aaPredicted RBP18.47■□□□□ 0.55
PTCD2-207ENST00000503868 NCOA3Q9Y6Q9 1424 aa18.46■□□□□ 0.55
PTCD2-207ENST00000503868 MYBBP1AQ9BQG0 1328 aaKnown RBP18.46■□□□□ 0.55
PTCD2-207ENST00000503868 CCDC184Q52MB2 194 aa18.45■□□□□ 0.54
PTCD2-207ENST00000503868 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
PTCD2-207ENST00000503868 MON2Q7Z3U7 1717 aa18.45■□□□□ 0.54
PTCD2-207ENST00000503868 NUTM2FA1L443 756 aa18.44■□□□□ 0.54
PTCD2-207ENST00000503868 CGNL1Q0VF96 1302 aa18.43■□□□□ 0.54
PTCD2-207ENST00000503868 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
PTCD2-207ENST00000503868 XIRP1Q702N8 1843 aaKnown RBP18.42■□□□□ 0.54
PTCD2-207ENST00000503868 NSD2O96028 1365 aa18.42■□□□□ 0.54
PTCD2-207ENST00000503868 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
PTCD2-207ENST00000503868 C19orf44Q9H6X5 657 aa18.41■□□□□ 0.54
PTCD2-207ENST00000503868 ACEP12821 1306 aa18.4■□□□□ 0.54
PTCD2-207ENST00000503868 ANKRD26Q9UPS8 1709 aa18.4■□□□□ 0.54
PTCD2-207ENST00000503868 EDC4Q6P2E9 1401 aaKnown RBP18.4■□□□□ 0.54
PTCD2-207ENST00000503868 POLR3AO14802 1390 aaPredicted RBP18.39■□□□□ 0.54
PTCD2-207ENST00000503868 BRD4O60885 1362 aaPredicted RBP18.39■□□□□ 0.54
PTCD2-207ENST00000503868 ZNF335Q9H4Z2 1342 aaPredicted RBP18.39■□□□□ 0.53
PTCD2-207ENST00000503868 FYB1O15117 783 aa18.39■□□□□ 0.53
PTCD2-207ENST00000503868 NLRP13Q86W25 1043 aa18.39■□□□□ 0.53
PTCD2-207ENST00000503868 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.53
PTCD2-207ENST00000503868 C14orf37Q86TY3 774 aa18.38■□□□□ 0.53
PTCD2-207ENST00000503868 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
PTCD2-207ENST00000503868 LRRC7Q96NW7 1537 aa18.38■□□□□ 0.53
PTCD2-207ENST00000503868 PPP2R1AP30153 589 aa18.38■□□□□ 0.53
PTCD2-207ENST00000503868 DCCP43146 1447 aa18.38■□□□□ 0.53
PTCD2-207ENST00000503868 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
PTCD2-207ENST00000503868 SSH2Q76I76 1423 aa18.36■□□□□ 0.53
PTCD2-207ENST00000503868 PMFBP1Q8TBY8 1022 aa18.36■□□□□ 0.53
PTCD2-207ENST00000503868 USP6P35125 1406 aa18.35■□□□□ 0.53
PTCD2-207ENST00000503868 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
PTCD2-207ENST00000503868 GGNBP2Q9H3C7 697 aa18.34■□□□□ 0.53
PTCD2-207ENST00000503868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTCD2-207ENST00000503868 PHF8Q9UPP1 1060 aa18.33■□□□□ 0.52
PTCD2-207ENST00000503868 NGDNQ8NEJ9 315 aaKnown RBP18.32■□□□□ 0.52
PTCD2-207ENST00000503868 PNISRQ8TF01 805 aaKnown RBP18.32■□□□□ 0.52
PTCD2-207ENST00000503868 TTC21BQ7Z4L5 1316 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms