RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 ABCC11Q96J66 1382 aa13.3□□□□□ -0.28
COPB2-202ENST00000502734 HRCP23327 699 aa13.29□□□□□ -0.28
COPB2-202ENST00000502734 SIRT1Q96EB6 747 aa13.29□□□□□ -0.28
COPB2-202ENST00000502734 LRPPRCP42704 1394 aaKnown RBP13.29□□□□□ -0.28
COPB2-202ENST00000502734 RAB3GAP2Q9H2M9 1393 aa13.29□□□□□ -0.28
COPB2-202ENST00000502734 PPLO60437 1756 aa13.28□□□□□ -0.28
COPB2-202ENST00000502734 CFAP70Q5T0N1 1121 aa13.28□□□□□ -0.28
COPB2-202ENST00000502734 C8orf37Q96NL8 207 aa13.28□□□□□ -0.28
COPB2-202ENST00000502734 AFF2P51816 1311 aa13.28□□□□□ -0.28
COPB2-202ENST00000502734 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
COPB2-202ENST00000502734 NUTM2FA1L443 756 aa13.27□□□□□ -0.29
COPB2-202ENST00000502734 NGLY1Q96IV0 654 aa13.27□□□□□ -0.29
COPB2-202ENST00000502734 QTRT2Q9H974 415 aaKnown RBP13.27□□□□□ -0.29
COPB2-202ENST00000502734 SHPRHQ149N8 1683 aa13.27□□□□□ -0.29
COPB2-202ENST00000502734 SETD1AO15047 1707 aaKnown RBP13.26□□□□□ -0.29
COPB2-202ENST00000502734 FOXO3O43524 673 aa13.26□□□□□ -0.29
COPB2-202ENST00000502734 ADAMTS2O95450 1211 aa13.26□□□□□ -0.29
COPB2-202ENST00000502734 NPHP3Q7Z494 1330 aa13.26□□□□□ -0.29
COPB2-202ENST00000502734 NALCNQ8IZF0 1738 aa13.25□□□□□ -0.29
COPB2-202ENST00000502734 TECPR2O15040 1411 aa13.25□□□□□ -0.29
COPB2-202ENST00000502734 PIK3C2GO75747 1445 aa13.25□□□□□ -0.29
COPB2-202ENST00000502734 DHX57Q6P158 1386 aaKnown RBP13.25□□□□□ -0.29
COPB2-202ENST00000502734 YTHDC2Q9H6S0 1430 aaKnown RBP13.24□□□□□ -0.29
COPB2-202ENST00000502734 PLEKHH1Q9ULM0 1364 aa13.24□□□□□ -0.29
COPB2-202ENST00000502734 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
COPB2-202ENST00000502734 RBM6P78332 1123 aaKnown RBP13.23□□□□□ -0.29
COPB2-202ENST00000502734 STAC3Q96MF2 364 aa13.23□□□□□ -0.29
COPB2-202ENST00000502734 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
COPB2-202ENST00000502734 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
COPB2-202ENST00000502734 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
COPB2-202ENST00000502734 POGKQ9P215 609 aa13.22□□□□□ -0.29
COPB2-202ENST00000502734 PRAM1Q96QH2 718 aa13.21□□□□□ -0.29
COPB2-202ENST00000502734 SAFB2Q14151 953 aaKnown RBP eCLIP13.2□□□□□ -0.3
COPB2-202ENST00000502734 KRT28Q7Z3Y7 464 aa13.2□□□□□ -0.3
COPB2-202ENST00000502734 FNBP4Q8N3X1 1017 aaPredicted RBP13.2□□□□□ -0.3
COPB2-202ENST00000502734 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
COPB2-202ENST00000502734 USP21Q9UK80 565 aa13.2□□□□□ -0.3
COPB2-202ENST00000502734 NRXN1Q9ULB1 1477 aa13.19□□□□□ -0.3
COPB2-202ENST00000502734 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
COPB2-202ENST00000502734 LAMC1P11047 1609 aa13.18□□□□□ -0.3
COPB2-202ENST00000502734 PSME1Q06323 249 aa13.18□□□□□ -0.3
COPB2-202ENST00000502734 TRPC5Q9UL62 973 aaPredicted RBP13.18□□□□□ -0.3
COPB2-202ENST00000502734 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
COPB2-202ENST00000502734 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
COPB2-202ENST00000502734 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
COPB2-202ENST00000502734 MYOM2P54296 1465 aa13.17□□□□□ -0.3
COPB2-202ENST00000502734 IFT172Q9UG01 1749 aa13.17□□□□□ -0.3
COPB2-202ENST00000502734 SPATA31A3Q5VYP0 1347 aa13.16□□□□□ -0.3
COPB2-202ENST00000502734 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
COPB2-202ENST00000502734 PXDNQ92626 1479 aa13.15□□□□□ -0.3
COPB2-202ENST00000502734 PMFBP1Q8TBY8 1022 aa13.14□□□□□ -0.31
COPB2-202ENST00000502734 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
COPB2-202ENST00000502734 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
COPB2-202ENST00000502734 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
COPB2-202ENST00000502734 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
COPB2-202ENST00000502734 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
COPB2-202ENST00000502734 KNDC1Q76NI1 1749 aa13.12□□□□□ -0.31
COPB2-202ENST00000502734 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
COPB2-202ENST00000502734 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
COPB2-202ENST00000502734 DLC1Q96QB1 1528 aa13.1□□□□□ -0.31
COPB2-202ENST00000502734 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
COPB2-202ENST00000502734 UNC5CLQ8IV45 518 aa13.1□□□□□ -0.31
COPB2-202ENST00000502734 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
COPB2-202ENST00000502734 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
COPB2-202ENST00000502734 RGS12O14924 1447 aa13.09□□□□□ -0.31
COPB2-202ENST00000502734 ATRNO75882 1429 aa13.09□□□□□ -0.31
COPB2-202ENST00000502734 COL22A1Q8NFW1 1626 aaPredicted RBP13.09□□□□□ -0.31
COPB2-202ENST00000502734 BCL9LQ86UU0 1499 aa13.09□□□□□ -0.31
COPB2-202ENST00000502734 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
COPB2-202ENST00000502734 ADGRB1O14514 1584 aa13.08□□□□□ -0.32
COPB2-202ENST00000502734 ANKARQ7Z5J8 1434 aa13.08□□□□□ -0.32
COPB2-202ENST00000502734 NGDNQ8NEJ9 315 aaKnown RBP13.07□□□□□ -0.32
COPB2-202ENST00000502734 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
COPB2-202ENST00000502734 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
COPB2-202ENST00000502734 EIF3AQ14152 1382 aaKnown RBP13.07□□□□□ -0.32
COPB2-202ENST00000502734 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
COPB2-202ENST00000502734 TNS3Q68CZ2 1445 aa13.06□□□□□ -0.32
COPB2-202ENST00000502734 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
COPB2-202ENST00000502734 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
COPB2-202ENST00000502734 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
COPB2-202ENST00000502734 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
COPB2-202ENST00000502734 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
COPB2-202ENST00000502734 ATAD2Q6PL18 1390 aa13.05□□□□□ -0.32
COPB2-202ENST00000502734 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
COPB2-202ENST00000502734 VPS72Q15906 364 aa13.04□□□□□ -0.32
COPB2-202ENST00000502734 SLIT2O94813 1529 aa13.03□□□□□ -0.32
COPB2-202ENST00000502734 RGPD8O14715 1765 aaPredicted RBP13.03□□□□□ -0.32
COPB2-202ENST00000502734 CCDC125Q86Z20 511 aa13.03□□□□□ -0.32
COPB2-202ENST00000502734 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
COPB2-202ENST00000502734 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
COPB2-202ENST00000502734 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
COPB2-202ENST00000502734 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
COPB2-202ENST00000502734 SEPT12Q8IYM1 358 aa13.01□□□□□ -0.33
COPB2-202ENST00000502734 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
COPB2-202ENST00000502734 ADGRB2O60241 1585 aa13□□□□□ -0.33
COPB2-202ENST00000502734 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
COPB2-202ENST00000502734 SIN3AQ96ST3 1273 aa13□□□□□ -0.33
COPB2-202ENST00000502734 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
COPB2-202ENST00000502734 BTG4Q9NY30 223 aa13□□□□□ -0.33
COPB2-202ENST00000502734 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms