RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
COPB2-202ENST00000502734 ABCC9O60706 1549 aa19.87■□□□□ 0.77
COPB2-202ENST00000502734 CCDC180Q9P1Z9 1646 aa19.82■□□□□ 0.76
COPB2-202ENST00000502734 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
COPB2-202ENST00000502734 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
COPB2-202ENST00000502734 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
COPB2-202ENST00000502734 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
COPB2-202ENST00000502734 NACADO15069 1562 aa18.81■□□□□ 0.6
COPB2-202ENST00000502734 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
COPB2-202ENST00000502734 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
COPB2-202ENST00000502734 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
COPB2-202ENST00000502734 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
COPB2-202ENST00000502734 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
COPB2-202ENST00000502734 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
COPB2-202ENST00000502734 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
COPB2-202ENST00000502734 SCRIBQ14160 1630 aa18.11■□□□□ 0.49
COPB2-202ENST00000502734 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
COPB2-202ENST00000502734 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
COPB2-202ENST00000502734 CECR2Q9BXF3 1484 aa17.9■□□□□ 0.46
COPB2-202ENST00000502734 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
COPB2-202ENST00000502734 NCAPD3P42695 1498 aa17.43■□□□□ 0.38
COPB2-202ENST00000502734 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
COPB2-202ENST00000502734 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
COPB2-202ENST00000502734 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
COPB2-202ENST00000502734 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
COPB2-202ENST00000502734 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
COPB2-202ENST00000502734 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
COPB2-202ENST00000502734 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
COPB2-202ENST00000502734 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
COPB2-202ENST00000502734 PEG3Q9GZU2 1588 aa17.13■□□□□ 0.33
COPB2-202ENST00000502734 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
COPB2-202ENST00000502734 NESP48681 1621 aa17.08■□□□□ 0.32
COPB2-202ENST00000502734 CUX2O14529 1486 aa17.08■□□□□ 0.32
COPB2-202ENST00000502734 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
COPB2-202ENST00000502734 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
COPB2-202ENST00000502734 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
COPB2-202ENST00000502734 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
COPB2-202ENST00000502734 WIZO95785 1651 aa16.9■□□□□ 0.3
COPB2-202ENST00000502734 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
COPB2-202ENST00000502734 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
COPB2-202ENST00000502734 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
COPB2-202ENST00000502734 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
COPB2-202ENST00000502734 CFTRP13569 1480 aa16.71■□□□□ 0.27
COPB2-202ENST00000502734 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
COPB2-202ENST00000502734 FANCD2Q9BXW9 1451 aa16.68■□□□□ 0.26
COPB2-202ENST00000502734 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
COPB2-202ENST00000502734 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
COPB2-202ENST00000502734 WDR62O43379 1518 aa16.64■□□□□ 0.25
COPB2-202ENST00000502734 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
COPB2-202ENST00000502734 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
COPB2-202ENST00000502734 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
COPB2-202ENST00000502734 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
COPB2-202ENST00000502734 ABCC8Q09428 1581 aa16.37■□□□□ 0.21
COPB2-202ENST00000502734 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
COPB2-202ENST00000502734 IFT140Q96RY7 1462 aa16.36■□□□□ 0.21
COPB2-202ENST00000502734 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
COPB2-202ENST00000502734 ZNF608Q9ULD9 1512 aaPredicted RBP16.31■□□□□ 0.2
COPB2-202ENST00000502734 SUPT5HO00267 1087 aaKnown RBP16.29■□□□□ 0.2
COPB2-202ENST00000502734 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.2
COPB2-202ENST00000502734 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.195e-9■■□□□ 12.5
COPB2-202ENST00000502734 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
COPB2-202ENST00000502734 SOGA1O94964 1423 aa16.19■□□□□ 0.18
COPB2-202ENST00000502734 FBLN2P98095 1184 aa16.18■□□□□ 0.18
COPB2-202ENST00000502734 RAD54L2Q9Y4B4 1467 aa16.17■□□□□ 0.18
COPB2-202ENST00000502734 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
COPB2-202ENST00000502734 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
COPB2-202ENST00000502734 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
COPB2-202ENST00000502734 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
COPB2-202ENST00000502734 CUX1P39880 1505 aa16.09■□□□□ 0.17
COPB2-202ENST00000502734 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
COPB2-202ENST00000502734 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
COPB2-202ENST00000502734 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
COPB2-202ENST00000502734 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
COPB2-202ENST00000502734 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
COPB2-202ENST00000502734 ARHGEF11O15085 1522 aa16.03■□□□□ 0.16
COPB2-202ENST00000502734 GRIN2BQ13224 1484 aa16■□□□□ 0.15
COPB2-202ENST00000502734 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
COPB2-202ENST00000502734 WDR97A6NE52 1622 aa15.99■□□□□ 0.15
COPB2-202ENST00000502734 CHD1O14646 1710 aa15.98■□□□□ 0.15
COPB2-202ENST00000502734 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
COPB2-202ENST00000502734 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
COPB2-202ENST00000502734 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
COPB2-202ENST00000502734 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
COPB2-202ENST00000502734 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
COPB2-202ENST00000502734 ARAP1Q96P48 1450 aa15.88■□□□□ 0.13
COPB2-202ENST00000502734 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
COPB2-202ENST00000502734 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
COPB2-202ENST00000502734 CLASP1Q7Z460 1538 aa15.85■□□□□ 0.13
COPB2-202ENST00000502734 TOP2BQ02880 1626 aa15.84■□□□□ 0.13
COPB2-202ENST00000502734 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
COPB2-202ENST00000502734 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
COPB2-202ENST00000502734 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
COPB2-202ENST00000502734 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
COPB2-202ENST00000502734 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
COPB2-202ENST00000502734 NUP160Q12769 1436 aa15.73■□□□□ 0.11
COPB2-202ENST00000502734 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
COPB2-202ENST00000502734 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
COPB2-202ENST00000502734 JPH4Q96JJ6 628 aa15.69■□□□□ 0.1
COPB2-202ENST00000502734 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
COPB2-202ENST00000502734 IGF1RP08069 1367 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms