RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 CABP2Q9NPB3 220 aa24.63■■□□□ 1.53
LINC00535-201ENST00000501400 ARHGAP23Q9P227 1491 aa24.62■■□□□ 1.53
LINC00535-201ENST00000501400 ADAMTS13Q76LX8 1427 aa24.62■■□□□ 1.53
LINC00535-201ENST00000501400 MINK1Q8N4C8 1332 aaPredicted RBP24.62■■□□□ 1.53
LINC00535-201ENST00000501400 PLEKHH1Q9ULM0 1364 aa24.62■■□□□ 1.53
LINC00535-201ENST00000501400 CPS1P31327 1500 aa24.61■■□□□ 1.53
LINC00535-201ENST00000501400 POGKQ9P215 609 aa24.61■■□□□ 1.53
LINC00535-201ENST00000501400 ANKRD36BQ8N2N9 1353 aa24.61■■□□□ 1.53
LINC00535-201ENST00000501400 TECPR2O15040 1411 aa24.61■■□□□ 1.53
LINC00535-201ENST00000501400 HDGFP51858 240 aaKnown RBP24.6■■□□□ 1.53
LINC00535-201ENST00000501400 PLEKHG1Q9ULL1 1385 aa24.59■■□□□ 1.53
LINC00535-201ENST00000501400 LTKP29376 864 aa24.58■■□□□ 1.53
LINC00535-201ENST00000501400 NINLQ9Y2I6 1382 aa24.58■■□□□ 1.53
LINC00535-201ENST00000501400 ADAMTSL3P82987 1691 aa24.58■■□□□ 1.53
LINC00535-201ENST00000501400 BLMP54132 1417 aaPredicted RBP24.58■■□□□ 1.52
LINC00535-201ENST00000501400 INSRP06213 1382 aa24.57■■□□□ 1.52
LINC00535-201ENST00000501400 SUPT16HQ9Y5B9 1047 aaKnown RBP24.57■■□□□ 1.52
LINC00535-201ENST00000501400 ATAD2Q6PL18 1390 aa24.57■■□□□ 1.52
LINC00535-201ENST00000501400 MED14O60244 1454 aa24.56■■□□□ 1.52
LINC00535-201ENST00000501400 WAPLQ7Z5K2 1190 aa24.56■■□□□ 1.52
LINC00535-201ENST00000501400 CD163L1Q9NR16 1453 aa24.56■■□□□ 1.52
LINC00535-201ENST00000501400 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
LINC00535-201ENST00000501400 SRPK2P78362 688 aaKnown RBP24.55■■□□□ 1.52
LINC00535-201ENST00000501400 A0A1W2PP64 1363 aa24.54■■□□□ 1.52
LINC00535-201ENST00000501400 CEP170BQ9Y4F5 1589 aaPredicted RBP24.54■■□□□ 1.52
LINC00535-201ENST00000501400 FAM135BQ49AJ0 1406 aa24.53■■□□□ 1.52
LINC00535-201ENST00000501400 SENP3-EIF4A1A0A087X0R7 540 aa24.51■■□□□ 1.51
LINC00535-201ENST00000501400 CDK19Q9BWU1 502 aa24.51■■□□□ 1.51
LINC00535-201ENST00000501400 TXNDC2Q86VQ3 553 aa24.49■■□□□ 1.51
LINC00535-201ENST00000501400 ZNF142P52746 1687 aaPredicted RBP24.49■■□□□ 1.51
LINC00535-201ENST00000501400 SMG6Q86US8 1419 aaKnown RBP24.48■■□□□ 1.51
LINC00535-201ENST00000501400 CGNL1Q0VF96 1302 aa24.48■■□□□ 1.51
LINC00535-201ENST00000501400 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 BCANQ96GW7 911 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 NSD2O96028 1365 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 ROBO2Q9HCK4 1378 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 ANKRD26Q9UPS8 1709 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 PTPRUQ92729 1446 aa24.46■■□□□ 1.51
LINC00535-201ENST00000501400 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
LINC00535-201ENST00000501400 DIP2AQ14689 1571 aa24.46■■□□□ 1.51
LINC00535-201ENST00000501400 EID1Q9Y6B2 187 aa24.45■■□□□ 1.5
LINC00535-201ENST00000501400 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.44■■□□□ 1.5
LINC00535-201ENST00000501400 SHPRHQ149N8 1683 aa24.44■■□□□ 1.5
LINC00535-201ENST00000501400 FKBP8Q14318 412 aa24.44■■□□□ 1.5
LINC00535-201ENST00000501400 THEMISQ8N1K5 641 aaPredicted RBP24.44■■□□□ 1.5
LINC00535-201ENST00000501400 ADAMTS8Q9UP79 889 aa24.43■■□□□ 1.5
LINC00535-201ENST00000501400 ATP7BP35670 1465 aa24.43■■□□□ 1.5
LINC00535-201ENST00000501400 MORC1Q86VD1 984 aa24.42■■□□□ 1.5
LINC00535-201ENST00000501400 KIF20BQ96Q89 1820 aa24.42■■□□□ 1.5
LINC00535-201ENST00000501400 POLR3AO14802 1390 aaPredicted RBP24.41■■□□□ 1.5
LINC00535-201ENST00000501400 WASLO00401 505 aaPredicted RBP24.41■■□□□ 1.5
LINC00535-201ENST00000501400 SLC26A8Q96RN1 970 aa24.41■■□□□ 1.5
LINC00535-201ENST00000501400 TERF2IPQ9NYB0 399 aa24.4■■□□□ 1.5
LINC00535-201ENST00000501400 NUDCQ9Y266 331 aa24.4■■□□□ 1.5
LINC00535-201ENST00000501400 CABP1Q9NZU7 370 aa24.39■■□□□ 1.5
LINC00535-201ENST00000501400 XRN1Q8IZH2 1706 aaKnown RBP24.39■■□□□ 1.49
LINC00535-201ENST00000501400 NEFLP07196 543 aa24.39■■□□□ 1.49
LINC00535-201ENST00000501400 WDR43Q15061 677 aaKnown RBP eCLIP24.39■■□□□ 1.49
LINC00535-201ENST00000501400 PTCH1Q13635 1447 aa24.36■■□□□ 1.49
LINC00535-201ENST00000501400 TBX22Q9Y458 520 aa24.36■■□□□ 1.49
LINC00535-201ENST00000501400 CDC42BPGQ6DT37 1551 aa24.36■■□□□ 1.49
LINC00535-201ENST00000501400 TOPAZ1Q8N9V7 1692 aa24.36■■□□□ 1.49
LINC00535-201ENST00000501400 TNNT2P45379 298 aaPredicted RBP24.35■■□□□ 1.49
LINC00535-201ENST00000501400 PPIP5K1Q6PFW1 1433 aa24.35■■□□□ 1.49
LINC00535-201ENST00000501400 MON2Q7Z3U7 1717 aa24.35■■□□□ 1.49
LINC00535-201ENST00000501400 CPSF1Q10570 1443 aaKnown RBP24.34■■□□□ 1.49
LINC00535-201ENST00000501400 HDGFL2Q7Z4V5 671 aaPredicted RBP24.34■■□□□ 1.49
LINC00535-201ENST00000501400 AKAP12Q02952 1782 aa24.34■■□□□ 1.49
LINC00535-201ENST00000501400 SALL2Q9Y467 1007 aaPredicted RBP24.33■■□□□ 1.49
LINC00535-201ENST00000501400 SETD1BQ9UPS6 1966 aaKnown RBP24.33■■□□□ 1.49
LINC00535-201ENST00000501400 ITSN1Q15811 1721 aa24.32■■□□□ 1.48
LINC00535-201ENST00000501400 PRR36Q9H6K5 1346 aa24.31■■□□□ 1.48
LINC00535-201ENST00000501400 FYB1O15117 783 aa24.31■■□□□ 1.48
LINC00535-201ENST00000501400 GGNBP2Q9H3C7 697 aa24.31■■□□□ 1.48
LINC00535-201ENST00000501400 NUDT16Q96DE0 195 aaKnown RBP24.3■■□□□ 1.48
LINC00535-201ENST00000501400 AMOTL2Q9Y2J4 779 aa24.29■■□□□ 1.48
LINC00535-201ENST00000501400 MTHFSP49914 203 aa24.29■■□□□ 1.48
LINC00535-201ENST00000501400 NCKAP5LQ9HCH0 1330 aa24.28■■□□□ 1.48
LINC00535-201ENST00000501400 PDE3BQ13370 1112 aa24.28■■□□□ 1.48
LINC00535-201ENST00000501400 EDC4Q6P2E9 1401 aaKnown RBP24.27■■□□□ 1.48
LINC00535-201ENST00000501400 COL3A1P02461 1466 aaPredicted RBP24.26■■□□□ 1.47
LINC00535-201ENST00000501400 NRKQ7Z2Y5 1582 aa24.26■■□□□ 1.47
LINC00535-201ENST00000501400 IRX6P78412 446 aaPredicted RBP24.25■■□□□ 1.47
LINC00535-201ENST00000501400 CCDC61Q9Y6R9 512 aa24.25■■□□□ 1.47
LINC00535-201ENST00000501400 CCDC146Q8IYE0 955 aa24.25■■□□□ 1.47
LINC00535-201ENST00000501400 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
LINC00535-201ENST00000501400 RNF123Q5XPI4 1314 aa24.24■■□□□ 1.47
LINC00535-201ENST00000501400 CDCA7LQ96GN5 454 aa24.24■■□□□ 1.47
LINC00535-201ENST00000501400 NKTRP30414 1462 aaKnown RBP24.24■■□□□ 1.47
LINC00535-201ENST00000501400 ZNF521Q96K83 1311 aa24.24■■□□□ 1.47
LINC00535-201ENST00000501400 CHD2O14647 1828 aaKnown RBP24.23■■□□□ 1.47
LINC00535-201ENST00000501400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.21■■□□□ 1.47
LINC00535-201ENST00000501400 IQSEC2Q5JU85 1478 aa24.21■■□□□ 1.47
LINC00535-201ENST00000501400 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
LINC00535-201ENST00000501400 CFAP53Q96M91 514 aa24.2■■□□□ 1.46
LINC00535-201ENST00000501400 KCNA6P17658 529 aa24.18■■□□□ 1.46
LINC00535-201ENST00000501400 RGPD8O14715 1765 aaPredicted RBP24.18■■□□□ 1.46
LINC00535-201ENST00000501400 APAF1O14727 1248 aa24.18■■□□□ 1.46
LINC00535-201ENST00000501400 NALCNQ8IZF0 1738 aa24.16■■□□□ 1.46
LINC00535-201ENST00000501400 FMN2Q9NZ56 1722 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms