RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CDC42BPGQ6DT37 1551 aa27.65■■■□□ 2.02
PRKCB-209ENST00000498058 PLEKHH1Q9ULM0 1364 aa27.64■■■□□ 2.02
PRKCB-209ENST00000498058 RXRBP28702 533 aa27.64■■■□□ 2.02
PRKCB-209ENST00000498058 C8orf37Q96NL8 207 aa27.64■■■□□ 2.02
PRKCB-209ENST00000498058 PIK3C2GO75747 1445 aa27.64■■■□□ 2.02
PRKCB-209ENST00000498058 LRPPRCP42704 1394 aaKnown RBP27.63■■■□□ 2.01
PRKCB-209ENST00000498058 KNDC1Q76NI1 1749 aa27.61■■■□□ 2.01
PRKCB-209ENST00000498058 ADAMTS2O95450 1211 aa27.6■■■□□ 2.01
PRKCB-209ENST00000498058 UPF1Q92900 1129 aaKnown RBP eCLIP27.6■■■□□ 2.01
PRKCB-209ENST00000498058 ABCC11Q96J66 1382 aa27.6■■■□□ 2.01
PRKCB-209ENST00000498058 ESCO1Q5FWF5 840 aa27.58■■■□□ 2.01
PRKCB-209ENST00000498058 CDK12Q9NYV4 1490 aaPredicted RBP27.57■■■□□ 2
PRKCB-209ENST00000498058 NUTM2FA1L443 756 aa27.57■■■□□ 2
PRKCB-209ENST00000498058 COL22A1Q8NFW1 1626 aaPredicted RBP27.56■■■□□ 2
PRKCB-209ENST00000498058 QTRT2Q9H974 415 aaKnown RBP27.56■■■□□ 2
PRKCB-209ENST00000498058 YTHDC2Q9H6S0 1430 aaKnown RBP27.56■■■□□ 2
PRKCB-209ENST00000498058 PXDNQ92626 1479 aa27.56■■■□□ 2
PRKCB-209ENST00000498058 XPCQ01831 940 aaPredicted RBP27.54■■■□□ 2
PRKCB-209ENST00000498058 RAB3GAP2Q9H2M9 1393 aa27.54■■■□□ 2
PRKCB-209ENST00000498058 NRXN1Q9ULB1 1477 aa27.54■■■□□ 2
PRKCB-209ENST00000498058 RGS12O14924 1447 aa27.53■■■□□ 2
PRKCB-209ENST00000498058 NGLY1Q96IV0 654 aa27.53■■■□□ 2
PRKCB-209ENST00000498058 C14orf93Q9H972 538 aaKnown RBP27.53■■■□□ 2
PRKCB-209ENST00000498058 FMN2Q9NZ56 1722 aa27.53■■■□□ 2
PRKCB-209ENST00000498058 FOXO3O43524 673 aa27.52■■■□□ 2
PRKCB-209ENST00000498058 NPHP3Q7Z494 1330 aa27.51■■□□□ 1.99
PRKCB-209ENST00000498058 CFAP70Q5T0N1 1121 aa27.51■■□□□ 1.99
PRKCB-209ENST00000498058 MYOM2P54296 1465 aa27.51■■□□□ 1.99
PRKCB-209ENST00000498058 RBM6P78332 1123 aaKnown RBP27.5■■□□□ 1.99
PRKCB-209ENST00000498058 RGPD8O14715 1765 aaPredicted RBP27.48■■□□□ 1.99
PRKCB-209ENST00000498058 SIRT1Q96EB6 747 aa27.46■■□□□ 1.99
PRKCB-209ENST00000498058 ACIN1Q9UKV3 1341 aaKnown RBP27.45■■□□□ 1.99
PRKCB-209ENST00000498058 FNBP4Q8N3X1 1017 aaPredicted RBP27.45■■□□□ 1.98
PRKCB-209ENST00000498058 USP21Q9UK80 565 aa27.45■■□□□ 1.98
PRKCB-209ENST00000498058 MARF1Q9Y4F3 1742 aaKnown RBP27.44■■□□□ 1.98
PRKCB-209ENST00000498058 DHX57Q6P158 1386 aaKnown RBP27.41■■□□□ 1.98
PRKCB-209ENST00000498058 ATRNO75882 1429 aa27.41■■□□□ 1.98
PRKCB-209ENST00000498058 KIF1AQ12756 1690 aa27.4■■□□□ 1.98
PRKCB-209ENST00000498058 BCL9LQ86UU0 1499 aa27.39■■□□□ 1.98
PRKCB-209ENST00000498058 SAFB2Q14151 953 aaKnown RBP eCLIP27.39■■□□□ 1.98
PRKCB-209ENST00000498058 PRAM1Q96QH2 718 aa27.38■■□□□ 1.97
PRKCB-209ENST00000498058 TRPC5Q9UL62 973 aaPredicted RBP27.38■■□□□ 1.97
PRKCB-209ENST00000498058 ADGRB1O14514 1584 aa27.38■■□□□ 1.97
PRKCB-209ENST00000498058 SPATA31A3Q5VYP0 1347 aa27.38■■□□□ 1.97
PRKCB-209ENST00000498058 KRT28Q7Z3Y7 464 aa27.36■■□□□ 1.97
PRKCB-209ENST00000498058 DLC1Q96QB1 1528 aa27.35■■□□□ 1.97
PRKCB-209ENST00000498058 USP32Q8NFA0 1604 aa27.34■■□□□ 1.97
PRKCB-209ENST00000498058 PHF8Q9UPP1 1060 aa27.34■■□□□ 1.97
PRKCB-209ENST00000498058 KDM2AQ9Y2K7 1162 aa27.31■■□□□ 1.96
PRKCB-209ENST00000498058 TRAK1Q9UPV9 953 aa27.29■■□□□ 1.96
PRKCB-209ENST00000498058 ADGRB2O60241 1585 aa27.28■■□□□ 1.96
PRKCB-209ENST00000498058 DCAF11Q8TEB1 546 aa27.28■■□□□ 1.96
PRKCB-209ENST00000498058 POGKQ9P215 609 aa27.28■■□□□ 1.96
PRKCB-209ENST00000498058 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.27■■□□□ 1.96
PRKCB-209ENST00000498058 SLIT2O94813 1529 aa27.27■■□□□ 1.96
PRKCB-209ENST00000498058 TNS3Q68CZ2 1445 aa27.27■■□□□ 1.96
PRKCB-209ENST00000498058 CABLES1Q8TDN4 633 aa27.27■■□□□ 1.96
PRKCB-209ENST00000498058 HIRIP3Q9BW71 556 aaPredicted RBP27.26■■□□□ 1.95
PRKCB-209ENST00000498058 PMFBP1Q8TBY8 1022 aa27.25■■□□□ 1.95
PRKCB-209ENST00000498058 GJD4Q96KN9 370 aaPredicted RBP27.25■■□□□ 1.95
PRKCB-209ENST00000498058 GLI3P10071 1580 aa27.24■■□□□ 1.95
PRKCB-209ENST00000498058 HRCP23327 699 aa27.24■■□□□ 1.95
PRKCB-209ENST00000498058 ABCA3Q99758 1704 aa27.24■■□□□ 1.95
PRKCB-209ENST00000498058 ANKARQ7Z5J8 1434 aa27.24■■□□□ 1.95
PRKCB-209ENST00000498058 ATAD2Q6PL18 1390 aa27.23■■□□□ 1.95
PRKCB-209ENST00000498058 PRR36Q9H6K5 1346 aa27.23■■□□□ 1.95
PRKCB-209ENST00000498058 PLEKHG5O94827 1062 aa27.23■■□□□ 1.95
PRKCB-209ENST00000498058 SBNO1A3KN83 1393 aa27.22■■□□□ 1.95
PRKCB-209ENST00000498058 MINK1Q8N4C8 1332 aaPredicted RBP27.22■■□□□ 1.95
PRKCB-209ENST00000498058 PSME1Q06323 249 aa27.22■■□□□ 1.95
PRKCB-209ENST00000498058 UNC5CLQ8IV45 518 aa27.22■■□□□ 1.95
PRKCB-209ENST00000498058 RALGAPBQ86X10 1494 aa27.2■■□□□ 1.95
PRKCB-209ENST00000498058 TRPM3Q9HCF6 1732 aaPredicted RBP27.2■■□□□ 1.94
PRKCB-209ENST00000498058 EP400Q96L91 3159 aa27.18■■□□□ 1.94
PRKCB-209ENST00000498058 LMOD2Q6P5Q4 547 aa27.17■■□□□ 1.94
PRKCB-209ENST00000498058 PLCH1Q4KWH8 1693 aa27.17■■□□□ 1.94
PRKCB-209ENST00000498058 ARHGEF28Q8N1W1 1705 aaKnown RBP27.16■■□□□ 1.94
PRKCB-209ENST00000498058 TULP4Q9NRJ4 1543 aa27.16■■□□□ 1.94
PRKCB-209ENST00000498058 WASLO00401 505 aaPredicted RBP27.15■■□□□ 1.94
PRKCB-209ENST00000498058 BRWD3Q6RI45 1802 aa27.15■■□□□ 1.94
PRKCB-209ENST00000498058 ARHGEF10O15013 1369 aa27.14■■□□□ 1.94
PRKCB-209ENST00000498058 ALS2Q96Q42 1657 aa27.14■■□□□ 1.93
PRKCB-209ENST00000498058 HAP1P54257 671 aaPredicted RBP27.13■■□□□ 1.93
PRKCB-209ENST00000498058 STAC3Q96MF2 364 aa27.13■■□□□ 1.93
PRKCB-209ENST00000498058 NWD2Q9ULI1 1742 aa27.12■■□□□ 1.93
PRKCB-209ENST00000498058 FAM83GA6ND36 823 aa27.11■■□□□ 1.93
PRKCB-209ENST00000498058 VPS72Q15906 364 aa27.09■■□□□ 1.93
PRKCB-209ENST00000498058 CRYBG1Q9Y4K1 1723 aa27.07■■□□□ 1.92
PRKCB-209ENST00000498058 EIF3AQ14152 1382 aaKnown RBP27.07■■□□□ 1.92
PRKCB-209ENST00000498058 NRAPQ86VF7 1730 aa27.07■■□□□ 1.92
PRKCB-209ENST00000498058 ATP7BP35670 1465 aa27.06■■□□□ 1.92
PRKCB-209ENST00000498058 GPRASP1Q5JY77 1395 aa27.06■■□□□ 1.92
PRKCB-209ENST00000498058 SEPT12Q8IYM1 358 aa27.04■■□□□ 1.92
PRKCB-209ENST00000498058 ONECUT3O60422 494 aaPredicted RBP27.03■■□□□ 1.92
PRKCB-209ENST00000498058 KIAA1210Q9ULL0 1709 aa27.02■■□□□ 1.92
PRKCB-209ENST00000498058 NBPF1Q3BBV0 1214 aa27.02■■□□□ 1.92
PRKCB-209ENST00000498058 NGDNQ8NEJ9 315 aaKnown RBP27.02■■□□□ 1.92
PRKCB-209ENST00000498058 NUDT16Q96DE0 195 aaKnown RBP27.02■■□□□ 1.92
PRKCB-209ENST00000498058 ITSN1Q15811 1721 aa27.02■■□□□ 1.92
PRKCB-209ENST00000498058 CCDC125Q86Z20 511 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms