RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 CPS1P31327 1500 aa23.21■■□□□ 1.31
LMNA-216ENST00000496738 CABP2Q9NPB3 220 aa23.21■■□□□ 1.31
LMNA-216ENST00000496738 ROBO2Q9HCK4 1378 aa23.21■■□□□ 1.31
LMNA-216ENST00000496738 TECPR2O15040 1411 aa23.2■■□□□ 1.3
LMNA-216ENST00000496738 AMOTL2Q9Y2J4 779 aa23.19■■□□□ 1.3
LMNA-216ENST00000496738 HSPA2P54652 639 aa23.18■■□□□ 1.3
LMNA-216ENST00000496738 SRPK2P78362 688 aaKnown RBP23.18■■□□□ 1.3
LMNA-216ENST00000496738 TMC1Q8TDI8 760 aa23.18■■□□□ 1.3
LMNA-216ENST00000496738 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
LMNA-216ENST00000496738 NPHP4O75161 1426 aaPredicted RBP23.17■■□□□ 1.3
LMNA-216ENST00000496738 PRKRIP1Q9H875 184 aaPredicted RBP23.17■■□□□ 1.3
LMNA-216ENST00000496738 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
LMNA-216ENST00000496738 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.29
LMNA-216ENST00000496738 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
LMNA-216ENST00000496738 CDK19Q9BWU1 502 aa23.13■■□□□ 1.29
LMNA-216ENST00000496738 SLC12A5Q9H2X9 1139 aa23.13■■□□□ 1.29
LMNA-216ENST00000496738 SIRT1Q96EB6 747 aa23.12■■□□□ 1.29
LMNA-216ENST00000496738 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
LMNA-216ENST00000496738 KCNA6P17658 529 aa23.11■■□□□ 1.29
LMNA-216ENST00000496738 LMTK3Q96Q04 1460 aa23.1■■□□□ 1.29
LMNA-216ENST00000496738 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.1■■□□□ 1.29
LMNA-216ENST00000496738 CC2D1BQ5T0F9 858 aaKnown RBP23.09■■□□□ 1.29
LMNA-216ENST00000496738 PTCH1Q13635 1447 aa23.08■■□□□ 1.29
LMNA-216ENST00000496738 CCER2I3L3R5 266 aa23.08■■□□□ 1.28
LMNA-216ENST00000496738 KNSTRNQ9Y448 316 aa23.08■■□□□ 1.28
LMNA-216ENST00000496738 PIK3R4Q99570 1358 aa23.08■■□□□ 1.28
LMNA-216ENST00000496738 WASLO00401 505 aaPredicted RBP23.07■■□□□ 1.28
LMNA-216ENST00000496738 PUS7Q96PZ0 661 aaKnown RBP23.07■■□□□ 1.28
LMNA-216ENST00000496738 CHD2O14647 1828 aaKnown RBP23.06■■□□□ 1.28
LMNA-216ENST00000496738 CARD14Q9BXL6 1004 aa23.06■■□□□ 1.28
LMNA-216ENST00000496738 ATAD2Q6PL18 1390 aa23.05■■□□□ 1.28
LMNA-216ENST00000496738 KTN1Q86UP2 1357 aaKnown RBP23.05■■□□□ 1.28
LMNA-216ENST00000496738 CCDC184Q52MB2 194 aa23.05■■□□□ 1.28
LMNA-216ENST00000496738 RBM33Q96EV2 1170 aaKnown RBP23.04■■□□□ 1.28
LMNA-216ENST00000496738 NUTM2FA1L443 756 aa23.02■■□□□ 1.28
LMNA-216ENST00000496738 ADGRB2O60241 1585 aa23.01■■□□□ 1.27
LMNA-216ENST00000496738 NSD3Q9BZ95 1437 aa23.01■■□□□ 1.27
LMNA-216ENST00000496738 CABP1Q9NZU7 370 aa23.01■■□□□ 1.27
LMNA-216ENST00000496738 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
LMNA-216ENST00000496738 ANKRD36BQ8N2N9 1353 aa22.99■■□□□ 1.27
LMNA-216ENST00000496738 A0A1W2PP64 1363 aa22.99■■□□□ 1.27
LMNA-216ENST00000496738 PARD3Q8TEW0 1356 aa22.99■■□□□ 1.27
LMNA-216ENST00000496738 RALBP1Q15311 655 aa22.98■■□□□ 1.27
LMNA-216ENST00000496738 NUDT16Q96DE0 195 aaKnown RBP22.98■■□□□ 1.27
LMNA-216ENST00000496738 MRS2Q9HD23 443 aa22.98■■□□□ 1.27
LMNA-216ENST00000496738 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
LMNA-216ENST00000496738 PRR36Q9H6K5 1346 aa22.97■■□□□ 1.27
LMNA-216ENST00000496738 CD163L1Q9NR16 1453 aa22.97■■□□□ 1.27
LMNA-216ENST00000496738 PPIP5K1Q6PFW1 1433 aa22.96■■□□□ 1.27
LMNA-216ENST00000496738 ATP7BP35670 1465 aa22.96■■□□□ 1.27
LMNA-216ENST00000496738 STRCQ7RTU9 1775 aa22.95■■□□□ 1.26
LMNA-216ENST00000496738 MYBBP1AQ9BQG0 1328 aaKnown RBP22.95■■□□□ 1.26
LMNA-216ENST00000496738 TERF2IPQ9NYB0 399 aa22.94■■□□□ 1.26
LMNA-216ENST00000496738 NWD1Q149M9 1564 aa22.94■■□□□ 1.26
LMNA-216ENST00000496738 NALCNQ8IZF0 1738 aa22.94■■□□□ 1.26
LMNA-216ENST00000496738 HDGFL2Q7Z4V5 671 aaPredicted RBP22.92■■□□□ 1.26
LMNA-216ENST00000496738 CCDC61Q9Y6R9 512 aa22.91■■□□□ 1.26
LMNA-216ENST00000496738 C14orf37Q86TY3 774 aa22.9■■□□□ 1.26
LMNA-216ENST00000496738 USP32Q8NFA0 1604 aa22.9■■□□□ 1.26
LMNA-216ENST00000496738 NPC1L1Q9UHC9 1359 aa22.89■■□□□ 1.25
LMNA-216ENST00000496738 ERICH6Q7L0X2 663 aa22.89■■□□□ 1.25
LMNA-216ENST00000496738 CGNL1Q0VF96 1302 aa22.88■■□□□ 1.25
LMNA-216ENST00000496738 STRCP1A6NGW2 1772 aa22.88■■□□□ 1.25
LMNA-216ENST00000496738 PROSER2Q86WR7 435 aaPredicted RBP22.88■■□□□ 1.25
LMNA-216ENST00000496738 TOPAZ1Q8N9V7 1692 aa22.88■■□□□ 1.25
LMNA-216ENST00000496738 FAM9BQ8IZU0 186 aa22.88■■□□□ 1.25
LMNA-216ENST00000496738 CDC42BPGQ6DT37 1551 aa22.87■■□□□ 1.25
LMNA-216ENST00000496738 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
LMNA-216ENST00000496738 NKTRP30414 1462 aaKnown RBP22.86■■□□□ 1.25
LMNA-216ENST00000496738 NLRP13Q86W25 1043 aa22.86■■□□□ 1.25
LMNA-216ENST00000496738 ADGRL3Q9HAR2 1447 aa22.85■■□□□ 1.25
LMNA-216ENST00000496738 FMN2Q9NZ56 1722 aa22.85■■□□□ 1.25
LMNA-216ENST00000496738 TNNT2P45379 298 aaPredicted RBP22.85■■□□□ 1.25
LMNA-216ENST00000496738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.85■■□□□ 1.25
LMNA-216ENST00000496738 PPP2R1AP30153 589 aa22.84■■□□□ 1.25
LMNA-216ENST00000496738 CPSF1Q10570 1443 aaKnown RBP22.84■■□□□ 1.25
LMNA-216ENST00000496738 ITSN1Q15811 1721 aa22.84■■□□□ 1.25
LMNA-216ENST00000496738 MORC1Q86VD1 984 aa22.83■■□□□ 1.25
LMNA-216ENST00000496738 PMFBP1Q8TBY8 1022 aa22.83■■□□□ 1.25
LMNA-216ENST00000496738 BRD4O60885 1362 aaPredicted RBP22.83■■□□□ 1.25
LMNA-216ENST00000496738 GGNBP2Q9H3C7 697 aa22.83■■□□□ 1.25
LMNA-216ENST00000496738 CENPBP07199 599 aaPredicted RBP22.82■■□□□ 1.24
LMNA-216ENST00000496738 ACEP12821 1306 aa22.81■■□□□ 1.24
LMNA-216ENST00000496738 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
LMNA-216ENST00000496738 MON2Q7Z3U7 1717 aa22.8■■□□□ 1.24
LMNA-216ENST00000496738 FYB1O15117 783 aa22.79■■□□□ 1.24
LMNA-216ENST00000496738 TMEM94Q12767 1356 aa22.79■■□□□ 1.24
LMNA-216ENST00000496738 ANKARQ7Z5J8 1434 aa22.79■■□□□ 1.24
LMNA-216ENST00000496738 ZNF335Q9H4Z2 1342 aaPredicted RBP22.79■■□□□ 1.24
LMNA-216ENST00000496738 PLEKHG3A1L390 1219 aa22.79■■□□□ 1.24
LMNA-216ENST00000496738 KIF20BQ96Q89 1820 aa22.78■■□□□ 1.24
LMNA-216ENST00000496738 EDC4Q6P2E9 1401 aaKnown RBP22.78■■□□□ 1.24
LMNA-216ENST00000496738 NSD2O96028 1365 aa22.78■■□□□ 1.24
LMNA-216ENST00000496738 NME9Q86XW9 330 aa22.76■■□□□ 1.23
LMNA-216ENST00000496738 NGDNQ8NEJ9 315 aaKnown RBP22.76■■□□□ 1.23
LMNA-216ENST00000496738 PNISRQ8TF01 805 aaKnown RBP22.76■■□□□ 1.23
LMNA-216ENST00000496738 ZNF692Q9BU19 519 aaPredicted RBP22.74■■□□□ 1.23
LMNA-216ENST00000496738 ZRANB1Q9UGI0 708 aa22.74■■□□□ 1.23
LMNA-216ENST00000496738 ANKRD26Q9UPS8 1709 aa22.74■■□□□ 1.23
LMNA-216ENST00000496738 USP6P35125 1406 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms