RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-215	ENST00000495893	SETD5	Q9C0A6	1442 aa		4.62	□□□□□ -1.67
PHC3-215	ENST00000495893	ZMYND15	Q9H091	742 aa		4.62	□□□□□ -1.67
PHC3-215	ENST00000495893	ZFYVE16	Q7Z3T8	1539 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	FAM135A	Q9P2D6	1515 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	SCAPER	Q9BY12	1400 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	WDR66	Q8TBY9	1149 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	FRAT1	Q92837	279 aa	Predicted RBP	4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	CLASP1	Q7Z460	1538 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	SWAP70	Q9UH65	585 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	FYB1	O15117	783 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	ATF3	P18847	181 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	CHMP5	Q9NZZ3	219 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	RAPGEF6	Q8TEU7	1601 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	FAM161A	Q3B820	660 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	NUDC	Q9Y266	331 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	ERLIN1	O75477	346 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	RCAN3	Q9UKA8	241 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	KIF3B	O15066	747 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	UQCRHL	A0A096LP55	91 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	ERLIN2	O94905	339 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	UQCRH	P07919	91 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	CPSF2	Q9P2I0	782 aa	Known RBP	4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	NAT10	Q9H0A0	1025 aa	Known RBP	4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	ARAP1	Q96P48	1450 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	MICALCL	Q6ZW33	695 aa		4.61	□□□□□ -1.67
PHC3-215	ENST00000495893	WASHC2A	Q641Q2	1341 aa		4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	GBP2	P32456	591 aa	Predicted RBP	4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	NUCB2	P80303	420 aa		4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	SF3A1	Q15459	793 aa	Known RBP	4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	CFAP57	Q96MR6	1250 aa		4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	KDM2A	Q9Y2K7	1162 aa		4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	STK31	Q9BXU1	1019 aa		4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	LUZP1	Q86V48	1076 aa		4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	SLC26A8	Q96RN1	970 aa		4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	VPS8	Q8N3P4	1428 aa		4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	ANKRD18A	Q8IVF6	992 aa		4.6	□□□□□ -1.67
PHC3-215	ENST00000495893	TDO2	P48775	406 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	IQCE	Q6IPM2	695 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	CCDC91	Q7Z6B0	441 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	TMX4	Q9H1E5	349 aa	Predicted RBP	4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	LRPPRC	P42704	1394 aa	Known RBP	4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	MFAP1	P55081	439 aa	Known RBP	4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	MAGI3	Q5TCQ9	1506 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	MIA2	Q96PC5	1412 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	LIG1	P18858	919 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	BRD2	P25440	801 aa	Known RBP	4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	GOLGA2	Q08379	1002 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	POGK	Q9P215	609 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	ITSN2	Q9NZM3	1697 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	RPRD2	Q5VT52	1461 aa	Known RBP	4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	NF2	P35240	595 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	SEPT6	Q14141	434 aa		4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.59	□□□□□ -1.67
PHC3-215	ENST00000495893	SHTN1	A0MZ66	631 aa		4.59	□□□□□ -1.68
PHC3-215	ENST00000495893	EZR	P15311	586 aa	Known RBP	4.59	□□□□□ -1.68
PHC3-215	ENST00000495893	KDM5B	Q9UGL1	1544 aa		4.59	□□□□□ -1.68
PHC3-215	ENST00000495893	ATP10A	O60312	1499 aa		4.59	□□□□□ -1.68
PHC3-215	ENST00000495893	MPHOSPH10	O00566	681 aa	Known RBP	4.59	□□□□□ -1.68
PHC3-215	ENST00000495893	SARNP	P82979	210 aa	Known RBP	4.59	□□□□□ -1.68
PHC3-215	ENST00000495893	ENOX2	Q16206	610 aa	Known RBP	4.59	□□□□□ -1.68
PHC3-215	ENST00000495893	RBM10	P98175	930 aa	Known RBP	4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	FAM114A1	Q8IWE2	563 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	SASS6	Q6UVJ0	657 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	KIF2A	O00139	706 aa	Predicted RBP	4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	PDE3B	Q13370	1112 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	PTPRK	Q15262	1439 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	TXLNB	Q8N3L3	684 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	GTPBP4	Q9BZE4	634 aa	Known RBP	4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	VGF	O15240	615 aa	Predicted RBP	4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	CCDC146	Q8IYE0	955 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	PRX	Q9BXM0	1461 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893		H3BQV1	296 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	MBD3	O95983	291 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	PDE4A	P27815	886 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	LMOD3	Q0VAK6	560 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	IFFO2	Q5TF58	517 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	CENPH	Q9H3R5	247 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	CFAP43	Q8NDM7	1665 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	U2SURP	O15042	1029 aa	Known RBP	4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	MCM3	P25205	808 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	CCDC112	Q8NEF3	446 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	PSMD1	Q99460	953 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	CHMP4A	Q9BY43	222 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	GBP3	Q9H0R5	595 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	GLI2	P10070	1586 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	CCDC47	Q96A33	483 aa	Known RBP	4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	KIF7	Q2M1P5	1343 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	PLEKHG5	O94827	1062 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	RASSF8	Q8NHQ8	419 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	CGN	Q9P2M7	1197 aa	Known RBP	4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	HDAC5	Q9UQL6	1122 aa		4.58	□□□□□ -1.68
PHC3-215	ENST00000495893	C11orf95	C9JLR9	678 aa	Predicted RBP	4.57	□□□□□ -1.68
PHC3-215	ENST00000495893	CCDC141	Q6ZP82	1450 aa		4.57	□□□□□ -1.68
PHC3-215	ENST00000495893	ERICH4	A6NGS2	130 aa		4.57	□□□□□ -1.68
PHC3-215	ENST00000495893	SEPT11	Q9NVA2	429 aa	Known RBP	4.57	□□□□□ -1.68
PHC3-215	ENST00000495893	MIPOL1	Q8TD10	442 aa		4.57	□□□□□ -1.68
PHC3-215	ENST00000495893	RBM33	Q96EV2	1170 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms