RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 ARHGEF40Q8TER5 1519 aa19.54■□□□□ 0.72
CHTOP-206ENST00000495554 PUS7Q96PZ0 661 aaKnown RBP19.54■□□□□ 0.72
CHTOP-206ENST00000495554 SPATA31D1Q6ZQQ2 1576 aa19.53■□□□□ 0.72
CHTOP-206ENST00000495554 TULP4Q9NRJ4 1543 aa19.52■□□□□ 0.72
CHTOP-206ENST00000495554 STK26Q9P289 416 aa19.52■□□□□ 0.72
CHTOP-206ENST00000495554 EXOC6Q8TAG9 804 aa19.51■□□□□ 0.71
CHTOP-206ENST00000495554 PODXL2Q9NZ53 605 aa19.51■□□□□ 0.71
CHTOP-206ENST00000495554 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
CHTOP-206ENST00000495554 A2ML1A8K2U0 1454 aa19.5■□□□□ 0.71
CHTOP-206ENST00000495554 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
CHTOP-206ENST00000495554 STAG3Q9UJ98 1225 aa19.5■□□□□ 0.71
CHTOP-206ENST00000495554 ZNF521Q96K83 1311 aa19.5■□□□□ 0.71
CHTOP-206ENST00000495554 SAFB2Q14151 953 aaKnown RBP eCLIP19.49■□□□□ 0.71
CHTOP-206ENST00000495554 NSD3Q9BZ95 1437 aa19.49■□□□□ 0.71
CHTOP-206ENST00000495554 CABP2Q9NPB3 220 aa19.48■□□□□ 0.71
CHTOP-206ENST00000495554 PTPRMP28827 1452 aa19.48■□□□□ 0.71
CHTOP-206ENST00000495554 ALKQ9UM73 1620 aa19.48■□□□□ 0.71
CHTOP-206ENST00000495554 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
CHTOP-206ENST00000495554 ZMYM3Q14202 1370 aa19.47■□□□□ 0.71
CHTOP-206ENST00000495554 GOLGA2Q08379 1002 aa19.47■□□□□ 0.71
CHTOP-206ENST00000495554 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
CHTOP-206ENST00000495554 PRAM1Q96QH2 718 aa19.45■□□□□ 0.7
CHTOP-206ENST00000495554 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
CHTOP-206ENST00000495554 MSH5O43196 834 aa19.44■□□□□ 0.7
CHTOP-206ENST00000495554 NGEFQ8N5V2 710 aa19.43■□□□□ 0.7
CHTOP-206ENST00000495554 RIMS2Q9UQ26 1411 aa19.43■□□□□ 0.7
CHTOP-206ENST00000495554 ANKRD36BQ8N2N9 1353 aa19.43■□□□□ 0.7
CHTOP-206ENST00000495554 PLIN1O60240 522 aa19.42■□□□□ 0.7
CHTOP-206ENST00000495554 MORC1Q86VD1 984 aa19.42■□□□□ 0.7
CHTOP-206ENST00000495554 CCDC146Q8IYE0 955 aa19.42■□□□□ 0.7
CHTOP-206ENST00000495554 SLFN5Q08AF3 891 aa19.41■□□□□ 0.7
CHTOP-206ENST00000495554 MINK1Q8N4C8 1332 aaPredicted RBP19.41■□□□□ 0.7
CHTOP-206ENST00000495554 USP32Q8NFA0 1604 aa19.41■□□□□ 0.7
CHTOP-206ENST00000495554 APAF1O14727 1248 aa19.4■□□□□ 0.7
CHTOP-206ENST00000495554 ESF1Q9H501 851 aaKnown RBP19.4■□□□□ 0.7
CHTOP-206ENST00000495554 POGKQ9P215 609 aa19.4■□□□□ 0.7
CHTOP-206ENST00000495554 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.69
CHTOP-206ENST00000495554 SRPK2P78362 688 aaKnown RBP19.39■□□□□ 0.69
CHTOP-206ENST00000495554 TRMT2AQ8IZ69 625 aaKnown RBP19.39■□□□□ 0.69
CHTOP-206ENST00000495554 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
CHTOP-206ENST00000495554 CRBNQ96SW2 442 aa19.37■□□□□ 0.69
CHTOP-206ENST00000495554 SETD1AO15047 1707 aaKnown RBP19.37■□□□□ 0.69
CHTOP-206ENST00000495554 A0A1W2PP64 1363 aa19.36■□□□□ 0.69
CHTOP-206ENST00000495554 NINLQ9Y2I6 1382 aa19.35■□□□□ 0.69
CHTOP-206ENST00000495554 WAPLQ7Z5K2 1190 aa19.35■□□□□ 0.69
CHTOP-206ENST00000495554 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.35■□□□□ 0.69
CHTOP-206ENST00000495554 E9PSI1 815 aa19.35■□□□□ 0.69
CHTOP-206ENST00000495554 TCERG1O14776 1098 aaKnown RBP19.35■□□□□ 0.69
CHTOP-206ENST00000495554 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
CHTOP-206ENST00000495554 NSD2O96028 1365 aa19.34■□□□□ 0.69
CHTOP-206ENST00000495554 NCBP3Q53F19 620 aaKnown RBP19.34■□□□□ 0.69
CHTOP-206ENST00000495554 NRXN3Q9Y4C0 1643 aa19.34■□□□□ 0.69
CHTOP-206ENST00000495554 ATAD2Q6PL18 1390 aa19.34■□□□□ 0.69
CHTOP-206ENST00000495554 CD163L1Q9NR16 1453 aa19.34■□□□□ 0.69
CHTOP-206ENST00000495554 TNRQ92752 1358 aa19.33■□□□□ 0.69
CHTOP-206ENST00000495554 ABCC11Q96J66 1382 aa19.33■□□□□ 0.69
CHTOP-206ENST00000495554 MTHFSP49914 203 aa19.33■□□□□ 0.69
CHTOP-206ENST00000495554 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.33■□□□□ 0.69
CHTOP-206ENST00000495554 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
CHTOP-206ENST00000495554 DLC1Q96QB1 1528 aa19.33■□□□□ 0.68
CHTOP-206ENST00000495554 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
CHTOP-206ENST00000495554 METP08581 1390 aa19.32■□□□□ 0.68
CHTOP-206ENST00000495554 SHPRHQ149N8 1683 aa19.31■□□□□ 0.68
CHTOP-206ENST00000495554 SPINK5Q9NQ38 1064 aaPredicted RBP19.31■□□□□ 0.68
CHTOP-206ENST00000495554 PKNOX2Q96KN3 472 aa19.3■□□□□ 0.68
CHTOP-206ENST00000495554 CFAP53Q96M91 514 aa19.3■□□□□ 0.68
CHTOP-206ENST00000495554 CABP1Q9NZU7 370 aa19.29■□□□□ 0.68
CHTOP-206ENST00000495554 FYB1O15117 783 aa19.29■□□□□ 0.68
CHTOP-206ENST00000495554 MS4A1P11836 297 aa19.29■□□□□ 0.68
CHTOP-206ENST00000495554 RUNDC1Q96C34 613 aa19.29■□□□□ 0.68
CHTOP-206ENST00000495554 TERF2IPQ9NYB0 399 aa19.29■□□□□ 0.68
CHTOP-206ENST00000495554 WWC1Q8IX03 1113 aa19.28■□□□□ 0.68
CHTOP-206ENST00000495554 GGNBP2Q9H3C7 697 aa19.28■□□□□ 0.68
CHTOP-206ENST00000495554 TMEM2Q9UHN6 1383 aa19.27■□□□□ 0.68
CHTOP-206ENST00000495554 HDGFP51858 240 aaKnown RBP19.27■□□□□ 0.67
CHTOP-206ENST00000495554 NLRP1Q9C000 1473 aa19.26■□□□□ 0.67
CHTOP-206ENST00000495554 CEBPAP49715 358 aaPredicted RBP19.26■□□□□ 0.67
CHTOP-206ENST00000495554 DMRT2Q9Y5R5 561 aa19.26■□□□□ 0.67
CHTOP-206ENST00000495554 UBR1Q8IWV7 1749 aa19.26■□□□□ 0.67
CHTOP-206ENST00000495554 ANP32AP39687 249 aaKnown RBP19.26■□□□□ 0.67
CHTOP-206ENST00000495554 TXNDC2Q86VQ3 553 aa19.25■□□□□ 0.67
CHTOP-206ENST00000495554 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
CHTOP-206ENST00000495554 SIRT1Q96EB6 747 aa19.23■□□□□ 0.67
CHTOP-206ENST00000495554 HDGFL2Q7Z4V5 671 aaPredicted RBP19.23■□□□□ 0.67
CHTOP-206ENST00000495554 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
CHTOP-206ENST00000495554 MED14O60244 1454 aa19.22■□□□□ 0.67
CHTOP-206ENST00000495554 IQSEC2Q5JU85 1478 aa19.22■□□□□ 0.67
CHTOP-206ENST00000495554 LTKP29376 864 aa19.22■□□□□ 0.67
CHTOP-206ENST00000495554 KDM2BQ8NHM5 1336 aa19.22■□□□□ 0.67
CHTOP-206ENST00000495554 WASLO00401 505 aaPredicted RBP19.22■□□□□ 0.67
CHTOP-206ENST00000495554 CENPQQ7L2Z9 268 aaPredicted RBP19.22■□□□□ 0.67
CHTOP-206ENST00000495554 TECPR2O15040 1411 aa19.21■□□□□ 0.67
CHTOP-206ENST00000495554 PDE4AP27815 886 aa19.21■□□□□ 0.67
CHTOP-206ENST00000495554 CCDC27Q2M243 656 aa19.21■□□□□ 0.67
CHTOP-206ENST00000495554 BCAR3O75815 825 aa19.2■□□□□ 0.66
CHTOP-206ENST00000495554 WDR63Q8IWG1 891 aa19.2■□□□□ 0.66
CHTOP-206ENST00000495554 ADAMTS13Q76LX8 1427 aa19.2■□□□□ 0.66
CHTOP-206ENST00000495554 FAM135BQ49AJ0 1406 aa19.2■□□□□ 0.66
CHTOP-206ENST00000495554 NEUROD2Q15784 382 aa19.19■□□□□ 0.66
CHTOP-206ENST00000495554 IPO9Q96P70 1041 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms