RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 SYNMO15061 1565 aa7.74□□□□□ -1.17
CTNNA3-204ENST00000494580 IQGAP3Q86VI3 1631 aa7.74□□□□□ -1.17
CTNNA3-204ENST00000494580 ZNF142P52746 1687 aaPredicted RBP7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 LMTK2Q8IWU2 1503 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 HFM1A2PYH4 1435 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 POTEJP0CG39 1038 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 TSPY4P0CV99 314 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 TSPY10P0CW01 314 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 RSPH4AQ5TD94 716 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 FAM163AQ96GL9 167 aaPredicted RBP7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 PZPP20742 1482 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 ERVK-7P63135 1459 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 E9PCH4 1651 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 FAM135AQ9P2D6 1515 aa7.73□□□□□ -1.17
CTNNA3-204ENST00000494580 SPATA31D1Q6ZQQ2 1576 aa7.72□□□□□ -1.17
CTNNA3-204ENST00000494580 CNTLNQ9NXG0 1405 aa7.72□□□□□ -1.17
CTNNA3-204ENST00000494580 CFAP65Q6ZU64 1925 aaKnown RBP7.72□□□□□ -1.17
CTNNA3-204ENST00000494580 ZMYM3Q14202 1370 aa7.71□□□□□ -1.17
CTNNA3-204ENST00000494580 CEP170BQ9Y4F5 1589 aaPredicted RBP7.71□□□□□ -1.17
CTNNA3-204ENST00000494580 TET3O43151 1660 aa7.71□□□□□ -1.18
CTNNA3-204ENST00000494580 FBXO31Q5XUX0 539 aaPredicted RBP7.71□□□□□ -1.18
CTNNA3-204ENST00000494580 MICALL2Q8IY33 904 aa7.71□□□□□ -1.18
CTNNA3-204ENST00000494580 MAMSTRQ6ZN01 415 aa7.7□□□□□ -1.18
CTNNA3-204ENST00000494580 TMEM121BQ9BXQ6 578 aaPredicted RBP7.7□□□□□ -1.18
CTNNA3-204ENST00000494580 STRCQ7RTU9 1775 aa7.69□□□□□ -1.18
CTNNA3-204ENST00000494580 HSPA2P54652 639 aa7.69□□□□□ -1.18
CTNNA3-204ENST00000494580 PIK3C2BO00750 1634 aa7.68□□□□□ -1.18
CTNNA3-204ENST00000494580 C3orf67Q6ZVT6 689 aa7.68□□□□□ -1.18
CTNNA3-204ENST00000494580 TSHZ2Q9NRE2 1034 aa7.68□□□□□ -1.18
CTNNA3-204ENST00000494580 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.68□□□□□ -1.18
CTNNA3-204ENST00000494580 NEURL4Q96JN8 1562 aa7.67□□□□□ -1.18
CTNNA3-204ENST00000494580 UBR1Q8IWV7 1749 aa7.67□□□□□ -1.18
CTNNA3-204ENST00000494580 MYO5BQ9ULV0 1848 aa7.67□□□□□ -1.18
CTNNA3-204ENST00000494580 HAP1P54257 671 aaPredicted RBP7.67□□□□□ -1.18
CTNNA3-204ENST00000494580 SCUBE2Q9NQ36 999 aa7.67□□□□□ -1.18
CTNNA3-204ENST00000494580 TNRQ92752 1358 aa7.67□□□□□ -1.18
CTNNA3-204ENST00000494580 NOS1P29475 1434 aa7.67□□□□□ -1.18
CTNNA3-204ENST00000494580 ARHGAP31Q2M1Z3 1444 aa7.67□□□□□ -1.18
CTNNA3-204ENST00000494580 UHRF1BP1Q6BDS2 1440 aa7.67□□□□□ -1.18
CTNNA3-204ENST00000494580 WASHC2CQ9Y4E1 1318 aa7.66□□□□□ -1.18
CTNNA3-204ENST00000494580 RAB3GAP2Q9H2M9 1393 aa7.66□□□□□ -1.18
CTNNA3-204ENST00000494580 PLA2R1Q13018 1463 aa7.66□□□□□ -1.18
CTNNA3-204ENST00000494580 CLTCL1P53675 1640 aa7.66□□□□□ -1.18
CTNNA3-204ENST00000494580 SPHKAPQ2M3C7 1700 aa7.66□□□□□ -1.18
CTNNA3-204ENST00000494580 A2ML1A8K2U0 1454 aa7.65□□□□□ -1.18
CTNNA3-204ENST00000494580 ADGRB3O60242 1522 aa7.65□□□□□ -1.18
CTNNA3-204ENST00000494580 NUP155O75694 1391 aa7.64□□□□□ -1.19
CTNNA3-204ENST00000494580 SETD1BQ9UPS6 1966 aaKnown RBP7.64□□□□□ -1.19
CTNNA3-204ENST00000494580 POLR1AO95602 1720 aaPredicted RBP7.64□□□□□ -1.19
CTNNA3-204ENST00000494580 TRPM2O94759 1503 aa7.63□□□□□ -1.19
CTNNA3-204ENST00000494580 CADPS2Q86UW7 1296 aa7.63□□□□□ -1.19
CTNNA3-204ENST00000494580 RPRD2Q5VT52 1461 aaKnown RBP7.62□□□□□ -1.19
CTNNA3-204ENST00000494580 NLRP1Q9C000 1473 aa7.62□□□□□ -1.19
CTNNA3-204ENST00000494580 PDE4AP27815 886 aa7.62□□□□□ -1.19
CTNNA3-204ENST00000494580 SLAIN1Q8ND83 568 aa7.62□□□□□ -1.19
CTNNA3-204ENST00000494580 TMC2Q8TDI7 906 aa7.62□□□□□ -1.19
CTNNA3-204ENST00000494580 TMEM131LA2VDJ0 1609 aa7.62□□□□□ -1.19
CTNNA3-204ENST00000494580 PTPRTO14522 1441 aa7.61□□□□□ -1.19
CTNNA3-204ENST00000494580 SETD5Q9C0A6 1442 aa7.61□□□□□ -1.19
CTNNA3-204ENST00000494580 KANK1Q14678 1352 aa7.61□□□□□ -1.19
CTNNA3-204ENST00000494580 TMEM92Q6UXU6 159 aa7.61□□□□□ -1.19
CTNNA3-204ENST00000494580 CDAN1Q8IWY9 1227 aa7.61□□□□□ -1.19
CTNNA3-204ENST00000494580 ARHGAP23Q9P227 1491 aa7.61□□□□□ -1.19
CTNNA3-204ENST00000494580 ESF1Q9H501 851 aaKnown RBP7.6□□□□□ -1.19
CTNNA3-204ENST00000494580 NRXN3Q9Y4C0 1643 aa7.6□□□□□ -1.19
CTNNA3-204ENST00000494580 STRCP1A6NGW2 1772 aa7.59□□□□□ -1.19
CTNNA3-204ENST00000494580 SLIT1O75093 1534 aa7.59□□□□□ -1.19
CTNNA3-204ENST00000494580 C2orf72A6NCS6 295 aa7.59□□□□□ -1.19
CTNNA3-204ENST00000494580 LARP6Q9BRS8 491 aaKnown RBP7.59□□□□□ -1.19
CTNNA3-204ENST00000494580 GPHNQ9NQX3 736 aaPredicted RBP7.59□□□□□ -1.19
CTNNA3-204ENST00000494580 ZFYVE9O95405 1425 aa7.59□□□□□ -1.19
CTNNA3-204ENST00000494580 NCKAP5LQ9HCH0 1330 aa7.58□□□□□ -1.2
CTNNA3-204ENST00000494580 KDM5AP29375 1690 aaKnown RBP7.58□□□□□ -1.2
CTNNA3-204ENST00000494580 IQGAP1P46940 1657 aa7.58□□□□□ -1.2
CTNNA3-204ENST00000494580 NEXMIFQ5QGS0 1516 aa7.57□□□□□ -1.2
CTNNA3-204ENST00000494580 KIF3CO14782 793 aa7.57□□□□□ -1.2
CTNNA3-204ENST00000494580 IDI1Q13907 227 aa7.57□□□□□ -1.2
CTNNA3-204ENST00000494580 CRISPLD2Q9H0B8 497 aa7.57□□□□□ -1.2
CTNNA3-204ENST00000494580 LTBP4Q8N2S1 1624 aa7.56□□□□□ -1.2
CTNNA3-204ENST00000494580 IFT172Q9UG01 1749 aa7.56□□□□□ -1.2
CTNNA3-204ENST00000494580 TRIM52Q96A61 297 aa7.56□□□□□ -1.2
CTNNA3-204ENST00000494580 SCAF11Q99590 1463 aaKnown RBP7.55□□□□□ -1.2
CTNNA3-204ENST00000494580 SETD1AO15047 1707 aaKnown RBP7.55□□□□□ -1.2
CTNNA3-204ENST00000494580 LTKP29376 864 aa7.55□□□□□ -1.2
CTNNA3-204ENST00000494580 WDR70Q9NW82 654 aa7.55□□□□□ -1.2
CTNNA3-204ENST00000494580 TMEM2Q9UHN6 1383 aa7.55□□□□□ -1.2
CTNNA3-204ENST00000494580 MED14O60244 1454 aa7.55□□□□□ -1.2
CTNNA3-204ENST00000494580 SPATA31E1Q6ZUB1 1445 aa7.54□□□□□ -1.2
CTNNA3-204ENST00000494580 PPLO60437 1756 aa7.54□□□□□ -1.2
CTNNA3-204ENST00000494580 ASXL1Q8IXJ9 1541 aa7.54□□□□□ -1.2
CTNNA3-204ENST00000494580 DSG2Q14126 1118 aa7.54□□□□□ -1.2
CTNNA3-204ENST00000494580 DDX27Q96GQ7 796 aaKnown RBP7.54□□□□□ -1.2
CTNNA3-204ENST00000494580 MPHOSPH9Q99550 1183 aa7.54□□□□□ -1.2
CTNNA3-204ENST00000494580 NPHP4O75161 1426 aaPredicted RBP7.53□□□□□ -1.2
CTNNA3-204ENST00000494580 RIMS2Q9UQ26 1411 aa7.53□□□□□ -1.2
CTNNA3-204ENST00000494580 KIF1BO60333 1816 aa7.53□□□□□ -1.2
CTNNA3-204ENST00000494580 FOXK1P85037 733 aa7.53□□□□□ -1.2
CTNNA3-204ENST00000494580 NUTM2DQ5VT03 806 aaPredicted RBP7.53□□□□□ -1.2
CTNNA3-204ENST00000494580 PLPP6Q8IY26 295 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms