RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 FAM98CQ17RN3 349 aaKnown RBP10.38□□□□□ -0.75
TRA2B-216ENST00000493864 MRPL50Q8N5N7 158 aaKnown RBP10.38□□□□□ -0.75
TRA2B-216ENST00000493864 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
TRA2B-216ENST00000493864 TMUB1Q9BVT8 246 aa10.38□□□□□ -0.75
TRA2B-216ENST00000493864 IQGAP2Q13576 1575 aa10.37□□□□□ -0.75
TRA2B-216ENST00000493864 TMEM134Q9H6X4 195 aa10.37□□□□□ -0.75
TRA2B-216ENST00000493864 HRO43593 1189 aa10.36□□□□□ -0.75
TRA2B-216ENST00000493864 LAPTM4BQ86VI4 370 aa10.36□□□□□ -0.75
TRA2B-216ENST00000493864 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
TRA2B-216ENST00000493864 SSTR3P32745 418 aaPredicted RBP10.35□□□□□ -0.75
TRA2B-216ENST00000493864 ARHGAP35Q9NRY4 1499 aa10.35□□□□□ -0.75
TRA2B-216ENST00000493864 PRG4Q92954 1404 aaPredicted RBP10.34□□□□□ -0.75
TRA2B-216ENST00000493864 MS4A1P11836 297 aa10.34□□□□□ -0.75
TRA2B-216ENST00000493864 HDGFP51858 240 aaKnown RBP10.34□□□□□ -0.75
TRA2B-216ENST00000493864 SWT1Q5T5J6 900 aaKnown RBP10.34□□□□□ -0.75
TRA2B-216ENST00000493864 IL27Q8NEV9 243 aa10.34□□□□□ -0.75
TRA2B-216ENST00000493864 FAM117AQ9C073 453 aa10.34□□□□□ -0.75
TRA2B-216ENST00000493864 FAM217BQ9NTX9 383 aaPredicted RBP10.34□□□□□ -0.75
TRA2B-216ENST00000493864 UGGT2Q9NYU1 1516 aa10.33□□□□□ -0.76
TRA2B-216ENST00000493864 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
TRA2B-216ENST00000493864 GOLGA8CPA6NN73 597 aa10.32□□□□□ -0.76
TRA2B-216ENST00000493864 DDX11L8A8MPP1 907 aa10.32□□□□□ -0.76
TRA2B-216ENST00000493864 SAMD7Q7Z3H4 446 aa10.32□□□□□ -0.76
TRA2B-216ENST00000493864 TTBK1Q5TCY1 1321 aaPredicted RBP10.32□□□□□ -0.76
TRA2B-216ENST00000493864 DISP1Q96F81 1524 aa10.31□□□□□ -0.76
TRA2B-216ENST00000493864 FHOD3Q2V2M9 1422 aa10.31□□□□□ -0.76
TRA2B-216ENST00000493864 RNF40O75150 1001 aa10.3□□□□□ -0.76
TRA2B-216ENST00000493864 SULF1Q8IWU6 871 aa10.3□□□□□ -0.76
TRA2B-216ENST00000493864 SAMD9Q5K651 1589 aa10.3□□□□□ -0.76
TRA2B-216ENST00000493864 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
TRA2B-216ENST00000493864 DDRGK1Q96HY6 314 aa10.29□□□□□ -0.76
TRA2B-216ENST00000493864 BEGAINQ9BUH8 593 aa10.29□□□□□ -0.76
TRA2B-216ENST00000493864 CARMIL2Q6F5E8 1435 aa10.29□□□□□ -0.76
TRA2B-216ENST00000493864 EFCAB5A4FU69 1503 aa10.28□□□□□ -0.76
TRA2B-216ENST00000493864 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
TRA2B-216ENST00000493864 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
TRA2B-216ENST00000493864 ANKK1Q8NFD2 765 aa10.27□□□□□ -0.77
TRA2B-216ENST00000493864 LRCH3Q96II8 777 aa10.27□□□□□ -0.77
TRA2B-216ENST00000493864 KIAA0556O60303 1618 aa10.26□□□□□ -0.77
TRA2B-216ENST00000493864 ADCY10Q96PN6 1610 aa10.26□□□□□ -0.77
TRA2B-216ENST00000493864 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
TRA2B-216ENST00000493864 SLF2Q8IX21 1173 aa10.26□□□□□ -0.77
TRA2B-216ENST00000493864 WNT2BQ93097 391 aa10.26□□□□□ -0.77
TRA2B-216ENST00000493864 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.26□□□□□ -0.77
TRA2B-216ENST00000493864 KIF13AQ9H1H9 1805 aa10.26□□□□□ -0.77
TRA2B-216ENST00000493864 CD46P15529 392 aa10.25□□□□□ -0.77
TRA2B-216ENST00000493864 RSPH4AQ5TD94 716 aa10.25□□□□□ -0.77
TRA2B-216ENST00000493864 ATP1B4Q9UN42 357 aaPredicted RBP10.25□□□□□ -0.77
TRA2B-216ENST00000493864 PTPRGP23470 1445 aa10.24□□□□□ -0.77
TRA2B-216ENST00000493864 VPS8Q8N3P4 1428 aa10.24□□□□□ -0.77
TRA2B-216ENST00000493864 SLC10A3P09131 477 aa10.24□□□□□ -0.77
TRA2B-216ENST00000493864 BCAMP50895 628 aa10.23□□□□□ -0.77
TRA2B-216ENST00000493864 FMN1Q68DA7 1419 aa10.23□□□□□ -0.77
TRA2B-216ENST00000493864 SOWAHBA6NEL2 793 aa10.21□□□□□ -0.77
TRA2B-216ENST00000493864 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.77
TRA2B-216ENST00000493864 NUTM1Q86Y26 1132 aa10.2□□□□□ -0.78
TRA2B-216ENST00000493864 PPARGC1BQ86YN6 1023 aaKnown RBP10.2□□□□□ -0.78
TRA2B-216ENST00000493864 CASKIN1Q8WXD9 1431 aa10.2□□□□□ -0.78
TRA2B-216ENST00000493864 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
TRA2B-216ENST00000493864 CFHP08603 1231 aa10.19□□□□□ -0.78
TRA2B-216ENST00000493864 GCGRP47871 477 aa10.19□□□□□ -0.78
TRA2B-216ENST00000493864 TBC1D2Q9BYX2 928 aa10.19□□□□□ -0.78
TRA2B-216ENST00000493864 PCDH10Q9P2E7 1040 aa10.19□□□□□ -0.78
TRA2B-216ENST00000493864 HPS5Q9UPZ3 1129 aa10.19□□□□□ -0.78
TRA2B-216ENST00000493864 PLB1Q6P1J6 1458 aa10.18□□□□□ -0.78
TRA2B-216ENST00000493864 PPP4CP60510 307 aa10.18□□□□□ -0.78
TRA2B-216ENST00000493864 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
TRA2B-216ENST00000493864 TSPOAP1O95153 1857 aa10.18□□□□□ -0.78
TRA2B-216ENST00000493864 RSPH6AQ9H0K4 717 aa10.17□□□□□ -0.78
TRA2B-216ENST00000493864 TSR3Q9UJK0 312 aaKnown RBP10.17□□□□□ -0.78
TRA2B-216ENST00000493864 PCF11O94913 1555 aaKnown RBP10.17□□□□□ -0.78
TRA2B-216ENST00000493864 KDM4AO75164 1064 aa10.16□□□□□ -0.78
TRA2B-216ENST00000493864 THSD4Q6ZMP0 1018 aa10.16□□□□□ -0.78
TRA2B-216ENST00000493864 NECTIN2Q92692 538 aa10.16□□□□□ -0.78
TRA2B-216ENST00000493864 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
TRA2B-216ENST00000493864 FYCO1Q9BQS8 1478 aa10.16□□□□□ -0.78
TRA2B-216ENST00000493864 UACAQ9BZF9 1416 aa10.16□□□□□ -0.78
TRA2B-216ENST00000493864 ABCA8O94911 1581 aa10.15□□□□□ -0.78
TRA2B-216ENST00000493864 DIXDC1Q155Q3 683 aa10.15□□□□□ -0.78
TRA2B-216ENST00000493864 SH3D19Q5HYK7 790 aa10.15□□□□□ -0.78
TRA2B-216ENST00000493864 KANK4Q5T7N3 995 aaPredicted RBP10.15□□□□□ -0.78
TRA2B-216ENST00000493864 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
TRA2B-216ENST00000493864 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
TRA2B-216ENST00000493864 ZCCHC11Q5TAX3 1644 aaKnown RBP10.15□□□□□ -0.79
TRA2B-216ENST00000493864 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.79
TRA2B-216ENST00000493864 DIP2BQ9P265 1576 aa10.14□□□□□ -0.79
TRA2B-216ENST00000493864 KMT5BQ4FZB7 885 aa10.14□□□□□ -0.79
TRA2B-216ENST00000493864 WBP1LQ9NX94 342 aa10.14□□□□□ -0.79
TRA2B-216ENST00000493864 NUP153P49790 1475 aaKnown RBP10.14□□□□□ -0.79
TRA2B-216ENST00000493864 MAPKBP1O60336 1514 aa10.13□□□□□ -0.79
TRA2B-216ENST00000493864 ABCC2Q92887 1545 aa10.13□□□□□ -0.79
TRA2B-216ENST00000493864 ATP10BO94823 1461 aa10.12□□□□□ -0.79
TRA2B-216ENST00000493864 PTPN5P54829 565 aa10.12□□□□□ -0.79
TRA2B-216ENST00000493864 USP46P62068 366 aa10.12□□□□□ -0.79
TRA2B-216ENST00000493864 FUT2Q10981 343 aa10.12□□□□□ -0.79
TRA2B-216ENST00000493864 SKIV2LQ15477 1246 aaKnown RBP10.12□□□□□ -0.79
TRA2B-216ENST00000493864 PCMTD1Q96MG8 357 aaPredicted RBP10.12□□□□□ -0.79
TRA2B-216ENST00000493864 GOPCQ9HD26 462 aa10.12□□□□□ -0.79
TRA2B-216ENST00000493864 EPRSP07814 1512 aaKnown RBP10.12□□□□□ -0.79
TRA2B-216ENST00000493864 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms