RNA–Protein interactions for RNA: ENST00000493622.5

PHGDH-206, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 742 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-206ENST00000493622 CD163L1Q9NR16 1453 aa12.16□□□□□ -0.46
PHGDH-206ENST00000493622 ARHGAP23Q9P227 1491 aa12.15□□□□□ -0.46
PHGDH-206ENST00000493622 SLIT1O75093 1534 aa12.15□□□□□ -0.46
PHGDH-206ENST00000493622 NINLQ9Y2I6 1382 aa12.15□□□□□ -0.46
PHGDH-206ENST00000493622 EVC2Q86UK5 1308 aa12.14□□□□□ -0.47
PHGDH-206ENST00000493622 ANKRD36BQ8N2N9 1353 aa12.14□□□□□ -0.47
PHGDH-206ENST00000493622 ABCC11Q96J66 1382 aa12.14□□□□□ -0.47
PHGDH-206ENST00000493622 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
PHGDH-206ENST00000493622 MED14O60244 1454 aa12.14□□□□□ -0.47
PHGDH-206ENST00000493622 ADAMTS13Q76LX8 1427 aa12.13□□□□□ -0.47
PHGDH-206ENST00000493622 ADGRB2O60241 1585 aa12.13□□□□□ -0.47
PHGDH-206ENST00000493622 ADAMTSL3P82987 1691 aa12.13□□□□□ -0.47
PHGDH-206ENST00000493622 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
PHGDH-206ENST00000493622 MON2Q7Z3U7 1717 aa12.12□□□□□ -0.47
PHGDH-206ENST00000493622 FKBP8Q14318 412 aa12.12□□□□□ -0.47
PHGDH-206ENST00000493622 SLC12A5Q9H2X9 1139 aa12.12□□□□□ -0.47
PHGDH-206ENST00000493622 ZNF142P52746 1687 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-206ENST00000493622 RIMS1Q86UR5 1692 aaKnown RBP12.12□□□□□ -0.47
PHGDH-206ENST00000493622 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
PHGDH-206ENST00000493622 TOPAZ1Q8N9V7 1692 aa12.11□□□□□ -0.47
PHGDH-206ENST00000493622 METP08581 1390 aa12.11□□□□□ -0.47
PHGDH-206ENST00000493622 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
PHGDH-206ENST00000493622 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHGDH-206ENST00000493622 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
PHGDH-206ENST00000493622 NUDCQ9Y266 331 aa12.11□□□□□ -0.47
PHGDH-206ENST00000493622 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-206ENST00000493622 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
PHGDH-206ENST00000493622 NSD2O96028 1365 aa12.1□□□□□ -0.47
PHGDH-206ENST00000493622 ATAD2Q6PL18 1390 aa12.1□□□□□ -0.47
PHGDH-206ENST00000493622 PRAM1Q96QH2 718 aa12.1□□□□□ -0.47
PHGDH-206ENST00000493622 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
PHGDH-206ENST00000493622 A0A1W2PP64 1363 aa12.09□□□□□ -0.47
PHGDH-206ENST00000493622 POLR3AO14802 1390 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-206ENST00000493622 PLEKHG1Q9ULL1 1385 aa12.09□□□□□ -0.47
PHGDH-206ENST00000493622 STK26Q9P289 416 aa12.09□□□□□ -0.47
PHGDH-206ENST00000493622 DIP2AQ14689 1571 aa12.09□□□□□ -0.47
PHGDH-206ENST00000493622 ITSN1Q15811 1721 aa12.08□□□□□ -0.47
PHGDH-206ENST00000493622 XRN1Q8IZH2 1706 aaKnown RBP12.08□□□□□ -0.47
PHGDH-206ENST00000493622 ATP7BP35670 1465 aa12.08□□□□□ -0.47
PHGDH-206ENST00000493622 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
PHGDH-206ENST00000493622 NEFLP07196 543 aa12.07□□□□□ -0.48
PHGDH-206ENST00000493622 SIRT1Q96EB6 747 aa12.07□□□□□ -0.48
PHGDH-206ENST00000493622 CEP170BQ9Y4F5 1589 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-206ENST00000493622 MINK1Q8N4C8 1332 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-206ENST00000493622 CDC42BPGQ6DT37 1551 aa12.06□□□□□ -0.48
PHGDH-206ENST00000493622 NRKQ7Z2Y5 1582 aa12.06□□□□□ -0.48
PHGDH-206ENST00000493622 COL3A1P02461 1466 aaPredicted RBP12.06□□□□□ -0.48
PHGDH-206ENST00000493622 CEBPAP49715 358 aaPredicted RBP12.05□□□□□ -0.48
PHGDH-206ENST00000493622 SAFB2Q14151 953 aaKnown RBP eCLIP12.05□□□□□ -0.48
PHGDH-206ENST00000493622 ADAMTS8Q9UP79 889 aa12.05□□□□□ -0.48
PHGDH-206ENST00000493622 ZNF521Q96K83 1311 aa12.05□□□□□ -0.48
PHGDH-206ENST00000493622 PTPRUQ92729 1446 aa12.04□□□□□ -0.48
PHGDH-206ENST00000493622 IQSEC2Q5JU85 1478 aa12.04□□□□□ -0.48
PHGDH-206ENST00000493622 LTKP29376 864 aa12.04□□□□□ -0.48
PHGDH-206ENST00000493622 PDE3BQ13370 1112 aa12.04□□□□□ -0.48
PHGDH-206ENST00000493622 ERICH6BQ5W0A0 696 aa12.04□□□□□ -0.48
PHGDH-206ENST00000493622 POGKQ9P215 609 aa12.04□□□□□ -0.48
PHGDH-206ENST00000493622 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
PHGDH-206ENST00000493622 CPSF1Q10570 1443 aaKnown RBP12.03□□□□□ -0.48
PHGDH-206ENST00000493622 SENP3-EIF4A1A0A087X0R7 540 aa12.03□□□□□ -0.48
PHGDH-206ENST00000493622 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-206ENST00000493622 WAPLQ7Z5K2 1190 aa12.03□□□□□ -0.48
PHGDH-206ENST00000493622 CDK19Q9BWU1 502 aa12.03□□□□□ -0.48
PHGDH-206ENST00000493622 SETD1BQ9UPS6 1966 aaKnown RBP12.03□□□□□ -0.48
PHGDH-206ENST00000493622 HDGFP51858 240 aaKnown RBP12.02□□□□□ -0.49
PHGDH-206ENST00000493622 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.49
PHGDH-206ENST00000493622 ROBO2Q9HCK4 1378 aa12.02□□□□□ -0.49
PHGDH-206ENST00000493622 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
PHGDH-206ENST00000493622 BCANQ96GW7 911 aa12.01□□□□□ -0.49
PHGDH-206ENST00000493622 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
PHGDH-206ENST00000493622 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
PHGDH-206ENST00000493622 MORC1Q86VD1 984 aa12□□□□□ -0.49
PHGDH-206ENST00000493622 NALCNQ8IZF0 1738 aa12□□□□□ -0.49
PHGDH-206ENST00000493622 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
PHGDH-206ENST00000493622 WASLO00401 505 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-206ENST00000493622 IRX6P78412 446 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-206ENST00000493622 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
PHGDH-206ENST00000493622 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
PHGDH-206ENST00000493622 MSH5O43196 834 aa11.98□□□□□ -0.49
PHGDH-206ENST00000493622 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
PHGDH-206ENST00000493622 TERF2IPQ9NYB0 399 aa11.98□□□□□ -0.49
PHGDH-206ENST00000493622 FMN2Q9NZ56 1722 aa11.97□□□□□ -0.49
PHGDH-206ENST00000493622 NKTRP30414 1462 aaKnown RBP11.97□□□□□ -0.49
PHGDH-206ENST00000493622 EDC4Q6P2E9 1401 aaKnown RBP11.97□□□□□ -0.49
PHGDH-206ENST00000493622 PRR36Q9H6K5 1346 aa11.97□□□□□ -0.49
PHGDH-206ENST00000493622 FYB1O15117 783 aa11.97□□□□□ -0.49
PHGDH-206ENST00000493622 TXNDC2Q86VQ3 553 aa11.97□□□□□ -0.49
PHGDH-206ENST00000493622 CABP1Q9NZU7 370 aa11.96□□□□□ -0.49
PHGDH-206ENST00000493622 TBX22Q9Y458 520 aa11.96□□□□□ -0.49
PHGDH-206ENST00000493622 USP54Q70EL1 1684 aa11.96□□□□□ -0.5
PHGDH-206ENST00000493622 PNPLA6Q8IY17 1366 aa11.95□□□□□ -0.5
PHGDH-206ENST00000493622 TRMT2AQ8IZ69 625 aaKnown RBP11.95□□□□□ -0.5
PHGDH-206ENST00000493622 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
PHGDH-206ENST00000493622 MTHFSP49914 203 aa11.94□□□□□ -0.5
PHGDH-206ENST00000493622 HDGFL2Q7Z4V5 671 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-206ENST00000493622 GGNBP2Q9H3C7 697 aa11.94□□□□□ -0.5
PHGDH-206ENST00000493622 PPP4R2Q9NY27 417 aa11.94□□□□□ -0.5
PHGDH-206ENST00000493622 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-206ENST00000493622 DUSP27Q5VZP5 1158 aa11.93□□□□□ -0.5
PHGDH-206ENST00000493622 CCDC146Q8IYE0 955 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms