RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 BLMP54132 1417 aaPredicted RBP25.54■■□□□ 1.68
NECAB3-214ENST00000493590 ITGAEP38570 1179 aa25.54■■□□□ 1.68
NECAB3-214ENST00000493590 XPCQ01831 940 aaPredicted RBP25.54■■□□□ 1.68
NECAB3-214ENST00000493590 DEFB132Q7Z7B7 95 aa25.54■■□□□ 1.68
NECAB3-214ENST00000493590 CLTCL1P53675 1640 aa25.54■■□□□ 1.68
NECAB3-214ENST00000493590 ESCO1Q5FWF5 840 aa25.52■■□□□ 1.68
NECAB3-214ENST00000493590 SF3B2Q13435 895 aaKnown RBP25.5■■□□□ 1.67
NECAB3-214ENST00000493590 NPHP3Q7Z494 1330 aa25.5■■□□□ 1.67
NECAB3-214ENST00000493590 KIF1BO60333 1816 aa25.49■■□□□ 1.67
NECAB3-214ENST00000493590 BRWD3Q6RI45 1802 aa25.49■■□□□ 1.67
NECAB3-214ENST00000493590 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.49■■□□□ 1.67
NECAB3-214ENST00000493590 GLI3P10071 1580 aa25.48■■□□□ 1.67
NECAB3-214ENST00000493590 RALGAPBQ86X10 1494 aa25.48■■□□□ 1.67
NECAB3-214ENST00000493590 PXDNQ92626 1479 aa25.48■■□□□ 1.67
NECAB3-214ENST00000493590 LRP5O75197 1615 aa25.48■■□□□ 1.67
NECAB3-214ENST00000493590 FOXO3O43524 673 aa25.46■■□□□ 1.67
NECAB3-214ENST00000493590 UNC5CLQ8IV45 518 aa25.45■■□□□ 1.66
NECAB3-214ENST00000493590 HFM1A2PYH4 1435 aa25.44■■□□□ 1.66
NECAB3-214ENST00000493590 NUTM2FA1L443 756 aa25.42■■□□□ 1.66
NECAB3-214ENST00000493590 CDC42BPGQ6DT37 1551 aa25.42■■□□□ 1.66
NECAB3-214ENST00000493590 PSDA5PKW4 1024 aaPredicted RBP25.41■■□□□ 1.66
NECAB3-214ENST00000493590 VGFO15240 615 aaPredicted RBP25.41■■□□□ 1.66
NECAB3-214ENST00000493590 SLIT2O94813 1529 aa25.39■■□□□ 1.66
NECAB3-214ENST00000493590 SEPT12Q8IYM1 358 aa25.39■■□□□ 1.66
NECAB3-214ENST00000493590 LRPPRCP42704 1394 aaKnown RBP25.38■■□□□ 1.65
NECAB3-214ENST00000493590 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
NECAB3-214ENST00000493590 PLEKHG5O94827 1062 aa25.37■■□□□ 1.65
NECAB3-214ENST00000493590 CCDC9Q9Y3X0 531 aaKnown RBP25.36■■□□□ 1.65
NECAB3-214ENST00000493590 USP32Q8NFA0 1604 aa25.36■■□□□ 1.65
NECAB3-214ENST00000493590 HAP1P54257 671 aaPredicted RBP25.35■■□□□ 1.65
NECAB3-214ENST00000493590 NAIPQ13075 1403 aa25.34■■□□□ 1.65
NECAB3-214ENST00000493590 A0A0G2JS52 829 aa25.32■■□□□ 1.64
NECAB3-214ENST00000493590 MYT1Q01538 1121 aa25.32■■□□□ 1.64
NECAB3-214ENST00000493590 KRT27Q7Z3Y8 459 aa25.32■■□□□ 1.64
NECAB3-214ENST00000493590 HRCP23327 699 aa25.31■■□□□ 1.64
NECAB3-214ENST00000493590 SPATA31A3Q5VYP0 1347 aa25.31■■□□□ 1.64
NECAB3-214ENST00000493590 PPLO60437 1756 aa25.31■■□□□ 1.64
NECAB3-214ENST00000493590 PLCH1Q4KWH8 1693 aa25.3■■□□□ 1.64
NECAB3-214ENST00000493590 STK26Q9P289 416 aa25.3■■□□□ 1.64
NECAB3-214ENST00000493590 BAG6P46379 1132 aa25.29■■□□□ 1.64
NECAB3-214ENST00000493590 VPS72Q15906 364 aa25.28■■□□□ 1.64
NECAB3-214ENST00000493590 WAPLQ7Z5K2 1190 aa25.28■■□□□ 1.64
NECAB3-214ENST00000493590 CABLES1Q8TDN4 633 aa25.27■■□□□ 1.64
NECAB3-214ENST00000493590 KIF1AQ12756 1690 aa25.26■■□□□ 1.63
NECAB3-214ENST00000493590 KRT28Q7Z3Y7 464 aa25.26■■□□□ 1.63
NECAB3-214ENST00000493590 RPGRIP1LQ68CZ1 1315 aa25.26■■□□□ 1.63
NECAB3-214ENST00000493590 CCDC144AA2RUR9 1427 aa25.26■■□□□ 1.63
NECAB3-214ENST00000493590 FMN2Q9NZ56 1722 aa25.24■■□□□ 1.63
NECAB3-214ENST00000493590 NWD2Q9ULI1 1742 aa25.24■■□□□ 1.63
NECAB3-214ENST00000493590 LMOD2Q6P5Q4 547 aa25.22■■□□□ 1.63
NECAB3-214ENST00000493590 PLEKHH1Q9ULM0 1364 aa25.21■■□□□ 1.63
NECAB3-214ENST00000493590 TNS3Q68CZ2 1445 aa25.2■■□□□ 1.63
NECAB3-214ENST00000493590 ONECUT3O60422 494 aaPredicted RBP25.2■■□□□ 1.62
NECAB3-214ENST00000493590 EN1Q05925 392 aaPredicted RBP25.2■■□□□ 1.62
NECAB3-214ENST00000493590 R3HDM1Q15032 1099 aaKnown RBP25.2■■□□□ 1.62
NECAB3-214ENST00000493590 ABCA3Q99758 1704 aa25.2■■□□□ 1.62
NECAB3-214ENST00000493590 PPARGC1BQ86YN6 1023 aaKnown RBP25.19■■□□□ 1.62
NECAB3-214ENST00000493590 FAM98CQ17RN3 349 aaKnown RBP25.18■■□□□ 1.62
NECAB3-214ENST00000493590 RGPD8O14715 1765 aaPredicted RBP25.18■■□□□ 1.62
NECAB3-214ENST00000493590 ADGRF5Q8IZF2 1346 aa25.17■■□□□ 1.62
NECAB3-214ENST00000493590 RGPD1P0DJD0 1748 aa25.17■■□□□ 1.62
NECAB3-214ENST00000493590 TECPR2O15040 1411 aa25.16■■□□□ 1.62
NECAB3-214ENST00000493590 PSME1Q06323 249 aa25.16■■□□□ 1.62
NECAB3-214ENST00000493590 FAM182BQ5T319 152 aa25.16■■□□□ 1.62
NECAB3-214ENST00000493590 TMEM132EQ6IEE7 984 aa25.15■■□□□ 1.62
NECAB3-214ENST00000493590 KNDC1Q76NI1 1749 aa25.15■■□□□ 1.62
NECAB3-214ENST00000493590 IFT172Q9UG01 1749 aa25.15■■□□□ 1.62
NECAB3-214ENST00000493590 PHF8Q9UPP1 1060 aa25.14■■□□□ 1.62
NECAB3-214ENST00000493590 RRBP1Q9P2E9 1410 aaKnown RBP25.13■■□□□ 1.61
NECAB3-214ENST00000493590 FAM83GA6ND36 823 aa25.13■■□□□ 1.61
NECAB3-214ENST00000493590 NRAPQ86VF7 1730 aa25.12■■□□□ 1.61
NECAB3-214ENST00000493590 ABCC11Q96J66 1382 aa25.1■■□□□ 1.61
NECAB3-214ENST00000493590 RGL3Q3MIN7 710 aa25.1■■□□□ 1.61
NECAB3-214ENST00000493590 SLC4A1APQ9BWU0 796 aaKnown RBP25.1■■□□□ 1.61
NECAB3-214ENST00000493590 ARHGEF10O15013 1369 aa25.09■■□□□ 1.61
NECAB3-214ENST00000493590 BTG4Q9NY30 223 aa25.09■■□□□ 1.61
NECAB3-214ENST00000493590 YY1P25490 414 aa25.08■■□□□ 1.61
NECAB3-214ENST00000493590 TNS1Q9HBL0 1735 aaKnown RBP25.08■■□□□ 1.61
NECAB3-214ENST00000493590 SBNO1A3KN83 1393 aa25.07■■□□□ 1.6
NECAB3-214ENST00000493590 EZH2Q15910 746 aaKnown RBP25.06■■□□□ 1.6
NECAB3-214ENST00000493590 NRXN1Q9ULB1 1477 aa25.06■■□□□ 1.6
NECAB3-214ENST00000493590 YTHDC2Q9H6S0 1430 aaKnown RBP25.05■■□□□ 1.6
NECAB3-214ENST00000493590 PMFBP1Q8TBY8 1022 aa25.03■■□□□ 1.6
NECAB3-214ENST00000493590 COL14A1Q05707 1796 aaKnown RBP25.03■■□□□ 1.6
NECAB3-214ENST00000493590 SAFB2Q14151 953 aaKnown RBP eCLIP25.02■■□□□ 1.6
NECAB3-214ENST00000493590 ANKRD30BQ9BXX2 1392 aa25.01■■□□□ 1.59
NECAB3-214ENST00000493590 DISP2A7MBM2 1401 aa25.01■■□□□ 1.59
NECAB3-214ENST00000493590 ADGRB2O60241 1585 aa25.01■■□□□ 1.59
NECAB3-214ENST00000493590 PIK3C2GO75747 1445 aa24.99■■□□□ 1.59
NECAB3-214ENST00000493590 THSD7AQ9UPZ6 1657 aa24.98■■□□□ 1.59
NECAB3-214ENST00000493590 SPATA31A5Q5VU36 1347 aa24.98■■□□□ 1.59
NECAB3-214ENST00000493590 SPATA31A7Q8IWB4 1347 aa24.98■■□□□ 1.59
NECAB3-214ENST00000493590 TRIM37O94972 964 aa24.98■■□□□ 1.59
NECAB3-214ENST00000493590 CAMKK2Q96RR4 588 aa24.96■■□□□ 1.59
NECAB3-214ENST00000493590 SPATA31E1Q6ZUB1 1445 aa24.95■■□□□ 1.59
NECAB3-214ENST00000493590 TRPM3Q9HCF6 1732 aaPredicted RBP24.95■■□□□ 1.59
NECAB3-214ENST00000493590 APBA3O96018 575 aa24.94■■□□□ 1.58
NECAB3-214ENST00000493590 PRAM1Q96QH2 718 aa24.94■■□□□ 1.58
NECAB3-214ENST00000493590 ALS2Q96Q42 1657 aa24.92■■□□□ 1.58
NECAB3-214ENST00000493590 SIRT1Q96EB6 747 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms